Factsheet for Bra032570.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400013645	Potato	cytosol	6.9	61.54
Bra032576.1-P	Field mustard	cytosol	56.75	53.52
Bra034597.1-P	Field mustard	cytosol	55.89	53.21
Bra033362.1-P	Field mustard	cytosol	52.3	50.84
AT1G43140.1	Thale cress	cytosol	50.72	48.96
Bra000874.1-P	Field mustard	cytosol	50.72	47.83
AT1G02980.1	Thale cress	cytosol	49.71	46.63
Bra033363.1-P	Field mustard	cytosol	51.87	46.4
Bra018706.1-P	Field mustard	cytosol	40.09	41.33
Bra028442.1-P	Field mustard	cytosol	39.51	39.12
Solyc06g008710.1.1	Tomato	cytosol	40.66	38.09
Bra036257.1-P	Field mustard	cytosol, nucleus, peroxisome	50.29	35.5
Bra016291.1-P	Field mustard	cytosol	24.71	23.5
Bra024680.1-P	Field mustard	cytosol	24.28	23.09
Bra025031.1-P	Field mustard	cytosol	24.28	22.24
Bra022023.1-P	Field mustard	plastid	24.57	21.78
Bra017569.1-P	Field mustard	plastid	24.14	21.37

Protein Annotations

Gene3D:1.10.10.10	Gene3D:1.10.10.2620	Gene3D:1.20.1310.10	MapMan:35.1	EnsemblPlantsGene:Bra032570	EnsemblPlants:Bra032570.1
EnsemblPlants:Bra032570.1-P	InterPro:Cullin_N	InterPro:Cullin_homology	InterPro:Cullin_homology_sf	InterPro:Cullin_neddylation_domain	InterPro:Cullin_repeat-like_dom_sf
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0006511	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	GO:GO:0019538	GO:GO:0031625	InterPro:IPR016158	InterPro:IPR036388
UniProt:M4EUT8	PFAM:PF00888	PFAM:PF10557	PFscan:PS50069	PANTHER:PTHR11932	PANTHER:PTHR11932:SF97
SMART:SM00182	SMART:SM00884	SUPFAM:SSF46785	SUPFAM:SSF74788	SUPFAM:SSF75632	UniParc:UPI000254301B
InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf	SEG:seg	:	:	:

Description

AT4G02570 (E=9e-090) ATCUL1, CUL1, AXR6 | ATCUL1 (ARABIDOPSIS THALIANA CULLIN 1); protein binding

Coordinates

chrA09:+:36665000..36668152

Molecular Weight (calculated)

80581.4 Da

IEP (calculated)

7.326

GRAVY (calculated)

-0.355

Length

696 amino acids

Sequence
(BLAST)

001: MFTESDMGKN LIFEDIKAKI GSVVTNLTRF LEGDNEDKTL LNEDKTLRKT ISKMCPSLRC HLCFYYERIY RTYYRETVLP SLKNTHGKEL LEKLYQRMIN
101: HKIMVSSLSE IFEDLNKFLA DGSYMRSKKM SRSLPLQVLR DRRNRGTVIQ NFEDLAMFSF REYLLLEINP ESRVAVVNMI MEEREGVAID SDLLKKVLDI
201: YMQSGIGTVQ VYEEHFEDFF LQQTASYYSH KASSWIQEYS CPEYMMKCEE SLEKEKERVT RYLHSSTEPK LVEIMQNQLL FLGAKQFLDK GQSGCGALLR
301: DDKKDDLSRM YRLYHAIPQV LEPVADVFRL HIATEGSVLI KEAEDSATSG IVEEQVLVRK IIDLHDKYMA YVTDCFQNHT LFHKSLKEAF EIFCNKKVAG
401: KPSAELLATF LYNLFKKAAN DKSNDDSALE STIYNVNDME LTKDIQRLYM GVAKPEVDFT ATVLTLSSWP SYKTSPEPNL PVEMVKCTKA FDPFYKSITK
501: SRKLNWAYSL GKCHVTGRFD AGSIELVVST YQAAVLCVFN NAERLTFNEI IEQVKLDHED LARVLHSLSC ADYKILKKEP ASKTISKTDS FEFNSKFTNK
601: KQRIKVPLPT LDEPLIDKVV DEVVKDRPSA IEACLVKIMK EKKVLQFRQL IAECVERLSH LFKPEIKQIK KRIEKLMEKD YLIRDIDDAN SFKYVA

Best Arabidopsis Sequence Match ( AT1G43140.1 )
(BLAST)

001: MATILFKVIM MKELILLEEG WSVMKTGVAK LQRILEDLSE PPFDPGQYIN LYTIIYDMCL QQPPNDYSQE LYNKYRGVVD HYNKETVLPS MRERHGEYML
101: RELVKRWANH KILVRWLSRF CFYLDRFYVA RRGLPTLNDV GFTSFHDLVY QEIQSEAKDV LLALIHKERE GEQIDRTLVK NVIDVYCGNG VGQMVIYEED
201: FESFLLQDTA SYYSRKASRW SQEDSCPDYM LKAEECLKLE KERVTNYLHS TTEPKLVEKV QNELLVVVAK QLIENEHSGC LALLRDDKMG DLSRMYRLYR
301: LIPQGLEPIA DLFKQHVTAE GNALIKQAAD AATNQDASAS QVLVRKEIEL HDKYMVYVDE CFQKHSLFHK LLKEAFEVFC NKTVAGASSA EILATYCDNI
401: LKTRGGSEKL SDEATEITLE KVVNLLVYIS DKDLFAEFYR KKQARRLLFD RSGIMKEVTD ITLARELQTN FVDYLSANMT TKLGIDFTVT VLTTGFWPSY
501: KTTDLNLPTE MVNCVEAFKV FYGTKTNSRR LSWIYSLGTC HILGKFEKKT MELVVSTYQA AVLLLFNNAE RLSYTEISEQ LNLSHEDLVR LLHSLSCLKY
601: KILIKEPMSR TISKTDTFEF NSKFTDKMRK IRVPLPPMDE RKKVVEDVDK DRRYAIDAAL VRIMKSRKVL AHQQLVSECV EHLSKMFKPD IKMIKKRIED
701: LINRDYLERD TENANTFKYV A

Arabidopsis Description

Putative cullin-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P0CH31]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.