Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra033362.1-P | Field mustard | cytosol | 98.33 | 98.74 |
| CDX89925 | Canola | cytosol | 78.86 | 77.78 |
| PGSC0003DMT400013645 | Potato | cytosol | 7.93 | 73.08 |
| CDY51951 | Canola | cytosol | 71.91 | 70.15 |
| CDY32488 | Canola | cytosol | 70.51 | 68.7 |
| CDX90932 | Canola | cytosol | 67.87 | 66.12 |
| CDY18013 | Canola | cytosol | 67.87 | 66.12 |
| CDY22060 | Canola | cytosol | 67.59 | 65.85 |
| CDY21896 | Canola | cytosol | 67.45 | 65.72 |
| CDY51862 | Canola | cytosol | 25.73 | 64.01 |
| CDY72590 | Canola | cytosol | 8.21 | 62.77 |
| AT1G43140.1 | Thale cress | cytosol | 62.87 | 62.69 |
| AT1G02980.1 | Thale cress | cytosol | 64.53 | 62.53 |
| CDY51863 | Canola | cytosol | 37.41 | 62.27 |
| CDX93643 | Canola | cytosol | 39.5 | 56.24 |
| CDX67439 | Canola | cytosol | 52.57 | 53.77 |
| CDY11663 | Canola | cytosol | 52.29 | 53.49 |
| CDX91291 | Canola | nucleus | 8.76 | 51.64 |
| Solyc06g008710.1.1 | Tomato | cytosol | 53.13 | 51.41 |
| CDY18137 | Canola | cytosol | 93.19 | 45.67 |
| CDY37452 | Canola | cytosol | 7.79 | 42.75 |
| CDY45004 | Canola | cytosol | 31.85 | 31.28 |
| CDY46437 | Canola | cytosol | 31.71 | 31.15 |
| CDY50732 | Canola | cytosol | 31.71 | 31.15 |
| CDY16196 | Canola | cytosol | 31.71 | 31.15 |
| CDY33461 | Canola | cytosol | 29.76 | 28.12 |
| CDY43957 | Canola | cytosol | 30.32 | 28.09 |
| CDX87735 | Canola | cytosol | 30.32 | 27.95 |
| CDX77644 | Canola | cytosol | 29.76 | 27.9 |
| CDY35152 | Canola | plastid | 30.04 | 27.48 |
| CDY03235 | Canola | plastid | 30.18 | 27.47 |
| CDY22061 | Canola | mitochondrion | 7.79 | 21.96 |
| CDY21897 | Canola | mitochondrion | 7.79 | 21.96 |
Protein Annotations
| Gene3D:1.10.10.10 | Gene3D:1.10.10.2620 | Gene3D:1.20.1310.10 | MapMan:19.2.2.8.1.2 | GO:A0A078DKZ5 | EnsemblPlants:CDX89926 |
| ProteinID:CDX89926 | ProteinID:CDX89926.1 | InterPro:Cullin_N | InterPro:Cullin_homology | InterPro:Cullin_homology_sf | InterPro:Cullin_neddylation_domain |
| InterPro:Cullin_repeat-like_dom_sf | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006511 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0019538 | GO:GO:0031625 | EnsemblPlantsGene:GSBRNA2T00150410001 |
| InterPro:IPR016158 | InterPro:IPR036388 | PFAM:PF00888 | PFAM:PF10557 | PFscan:PS50069 | PANTHER:PTHR11932 |
| PANTHER:PTHR11932:SF97 | SMART:SM00182 | SMART:SM00884 | SUPFAM:SSF46785 | SUPFAM:SSF74788 | SUPFAM:SSF75632 |
| UniPathway:UPA00143 | UniParc:UPI0004EDB493 | InterPro:WH-like_DNA-bd_sf | InterPro:WH_DNA-bd_sf | SEG:seg | : |
Description
BnaA10g01560D
Coordinates
chrLK031861:-:806124..808928
Molecular Weight (calculated)
84010.2 Da
IEP (calculated)
7.041
GRAVY (calculated)
-0.425
Length
719 amino acids
Sequence
(BLAST)
(BLAST)
001: MCSDTIIEYE QGCRFLETGV SKLTRILEEE TSEKPFTREQ YLEYYTTIYN MCIQENPHNY SQRLYHKYHD IVEHYANETV LPCIQQKDAV YLLRELSRKW
101: DHYKVFVKWL SHFFTYLERS FISYRNYPSL LEVAMKSFRD LVYLEVQVSA KDVVMALINK EREGGEIERE LLKNIVDIFV QSGMGTMEMY EKDFEMFLLE
201: DTASYYSRKA SSWIQEDSCP EYMIKSEESL KKEKERVTHY LHSTTEPKLV EIVQEKLLVS VAKQLLEKEH LCALLRDDKM DDLSRMYRLF NPIPNGLELV
301: AKAFRLHVTS EGNALIKQAQ DSATTGSIID LHDKYMVYVT DCFKNHTLFH KALKEAFEIF CNKKVGGSSS AELLATFCDN LFKKSGKSDE AIEAEIDNVV
401: KLLDYISDKD LFAEFYRKKL ARRLLFDRKV NDEHERSMLT KLKGQHGGQF TSKMEGMLTD MALAKENQKG FEGYVNGKPG GIDLAVTILN TGFWPSYKTS
501: TDLNLPREMV ECVDAFNSYY GSKTTKRKLS WTYSLGTCHV IGRFDHKPIE LVLFTYQAVV LCLFNNTERL TYQEIIEQLN LSHEDLVRVL HSLSCSKYKI
601: LNKEPASKSI STTDVFELNT MFTDKMRRIK VPLPPVDDRK KVVEDVDKDR SYAIDACIVR IMKSRKVLLH QQLVSECVEQ LRRMFKPDVK MIKKRIEELI
701: SREYLERDTK NPNTFKYVA
101: DHYKVFVKWL SHFFTYLERS FISYRNYPSL LEVAMKSFRD LVYLEVQVSA KDVVMALINK EREGGEIERE LLKNIVDIFV QSGMGTMEMY EKDFEMFLLE
201: DTASYYSRKA SSWIQEDSCP EYMIKSEESL KKEKERVTHY LHSTTEPKLV EIVQEKLLVS VAKQLLEKEH LCALLRDDKM DDLSRMYRLF NPIPNGLELV
301: AKAFRLHVTS EGNALIKQAQ DSATTGSIID LHDKYMVYVT DCFKNHTLFH KALKEAFEIF CNKKVGGSSS AELLATFCDN LFKKSGKSDE AIEAEIDNVV
401: KLLDYISDKD LFAEFYRKKL ARRLLFDRKV NDEHERSMLT KLKGQHGGQF TSKMEGMLTD MALAKENQKG FEGYVNGKPG GIDLAVTILN TGFWPSYKTS
501: TDLNLPREMV ECVDAFNSYY GSKTTKRKLS WTYSLGTCHV IGRFDHKPIE LVLFTYQAVV LCLFNNTERL TYQEIIEQLN LSHEDLVRVL HSLSCSKYKI
601: LNKEPASKSI STTDVFELNT MFTDKMRRIK VPLPPVDDRK KVVEDVDKDR SYAIDACIVR IMKSRKVLLH QQLVSECVEQ LRRMFKPDVK MIKKRIEELI
701: SREYLERDTK NPNTFKYVA
001: MAKKDSVLEA GWSVMEAGVA KLQKILEEVP DEPPFDPVQR MQLYTTVHNL CTQKPPNDYS QQIYDRYGGV YVDYNKQTVL PAIREKHGEY MLRELVKRWA
101: NQKILVRWLS HFFEYLDRFY TRRGSHPTLS AVGFISFRDL VYQELQSKAK DAVLALIHKE REGEQIDRAL LKNVIDVYCG NGMGELVKYE EDFESFLLED
201: SASYYSRNAS RWNQENSCPD YMIKAEESLR LEKERVTNYL HSTTEPKLVA KVQNELLVVV AKQLIENEHS GCRALLRDDK MDDLARMYRL YHPIPQGLDP
301: VADLFKQHIT VEGSALIKQA TEAATDKAAS TSGLKVQDQV LIRQLIDLHD KFMVYVDECF QKHSLFHKAL KEAFEVFCNK TVAGVSSAEI LATYCDNILK
401: TGGGIEKLEN EDLELTLEKV VKLLVYISDK DLFAEFFRKK QARRLLFDRN GNDYHERSLL TKFKELLGAQ FTSKMEGMLT DMTLAKEHQT NFVEFLSVNK
501: TKKLGMDFTV TVLTTGFWPS YKTTDLNLPI EMVNCVEAFK AYYGTKTNSR RLSWIYSLGT CQLAGKFDKK TIEIVVTTYQ AAVLLLFNNT ERLSYTEILE
601: QLNLGHEDLA RLLHSLSCLK YKILIKEPMS RNISNTDTFE FNSKFTDKMR RIRVPLPPMD ERKKIVEDVD KDRRYAIDAA LVRIMKSRKV LGHQQLVSEC
701: VEHLSKMFKP DIKMIKKRIE DLISRDYLER DTDNPNTFKY LA
101: NQKILVRWLS HFFEYLDRFY TRRGSHPTLS AVGFISFRDL VYQELQSKAK DAVLALIHKE REGEQIDRAL LKNVIDVYCG NGMGELVKYE EDFESFLLED
201: SASYYSRNAS RWNQENSCPD YMIKAEESLR LEKERVTNYL HSTTEPKLVA KVQNELLVVV AKQLIENEHS GCRALLRDDK MDDLARMYRL YHPIPQGLDP
301: VADLFKQHIT VEGSALIKQA TEAATDKAAS TSGLKVQDQV LIRQLIDLHD KFMVYVDECF QKHSLFHKAL KEAFEVFCNK TVAGVSSAEI LATYCDNILK
401: TGGGIEKLEN EDLELTLEKV VKLLVYISDK DLFAEFFRKK QARRLLFDRN GNDYHERSLL TKFKELLGAQ FTSKMEGMLT DMTLAKEHQT NFVEFLSVNK
501: TKKLGMDFTV TVLTTGFWPS YKTTDLNLPI EMVNCVEAFK AYYGTKTNSR RLSWIYSLGT CQLAGKFDKK TIEIVVTTYQ AAVLLLFNNT ERLSYTEILE
601: QLNLGHEDLA RLLHSLSCLK YKILIKEPMS RNISNTDTFE FNSKFTDKMR RIRVPLPPMD ERKKIVEDVD KDRRYAIDAA LVRIMKSRKV LGHQQLVSEC
701: VEHLSKMFKP DIKMIKKRIE DLISRDYLER DTDNPNTFKY LA
Arabidopsis Description
CUL2Cullin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRZ0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.