Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra033363.1-P | Field mustard | cytosol | 100.0 | 93.7 |
| CDX89926 | Canola | cytosol | 77.78 | 78.86 |
| PGSC0003DMT400013645 | Potato | cytosol | 7.41 | 69.23 |
| CDY51951 | Canola | cytosol | 68.59 | 67.84 |
| CDY32488 | Canola | cytosol | 67.35 | 66.53 |
| CDX90932 | Canola | cytosol | 65.71 | 64.91 |
| CDY22060 | Canola | cytosol | 65.57 | 64.77 |
| CDY21896 | Canola | cytosol | 65.57 | 64.77 |
| CDY18013 | Canola | cytosol | 65.57 | 64.77 |
| AT1G43140.1 | Thale cress | cytosol | 61.32 | 62.0 |
| CDY51863 | Canola | cytosol | 36.35 | 61.34 |
| AT1G02980.1 | Thale cress | cytosol | 62.14 | 61.05 |
| CDY51862 | Canola | cytosol | 23.46 | 59.17 |
| CDY72590 | Canola | cytosol | 7.41 | 57.45 |
| CDX93643 | Canola | cytosol | 37.59 | 54.26 |
| CDX91291 | Canola | nucleus | 9.05 | 54.1 |
| CDY11663 | Canola | cytosol | 49.93 | 51.78 |
| CDX67439 | Canola | cytosol | 49.93 | 51.78 |
| Solyc06g008710.1.1 | Tomato | cytosol | 51.3 | 50.34 |
| CDY37452 | Canola | cytosol | 8.23 | 45.8 |
| CDY18137 | Canola | cytosol | 80.11 | 39.81 |
| CDY50732 | Canola | cytosol | 31.82 | 31.69 |
| CDY16196 | Canola | cytosol | 31.82 | 31.69 |
| CDY45004 | Canola | cytosol | 31.69 | 31.56 |
| CDY46437 | Canola | cytosol | 31.69 | 31.56 |
| CDY33461 | Canola | cytosol | 30.59 | 29.3 |
| CDY43957 | Canola | cytosol | 31.0 | 29.12 |
| CDX87735 | Canola | cytosol | 31.0 | 28.97 |
| CDX77644 | Canola | cytosol | 30.32 | 28.81 |
| CDY35152 | Canola | plastid | 30.59 | 28.37 |
| CDY03235 | Canola | plastid | 30.73 | 28.35 |
| CDY22061 | Canola | mitochondrion | 7.0 | 20.0 |
| CDY21897 | Canola | mitochondrion | 7.0 | 20.0 |
Protein Annotations
| Gene3D:1.10.10.10 | Gene3D:1.10.10.2620 | Gene3D:1.20.1310.10 | MapMan:19.2.2.8.1.2 | GO:A0A078DL47 | EnsemblPlants:CDX89925 |
| ProteinID:CDX89925 | ProteinID:CDX89925.1 | InterPro:Cullin_N | InterPro:Cullin_homology | InterPro:Cullin_homology_sf | InterPro:Cullin_neddylation_domain |
| InterPro:Cullin_repeat-like_dom_sf | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006511 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0019538 | GO:GO:0031625 | EnsemblPlantsGene:GSBRNA2T00150409001 |
| InterPro:IPR016158 | InterPro:IPR036388 | PFAM:PF00888 | PFAM:PF10557 | PFscan:PS50069 | PANTHER:PTHR11932 |
| PANTHER:PTHR11932:SF97 | SMART:SM00182 | SMART:SM00884 | SUPFAM:SSF46785 | SUPFAM:SSF74788 | SUPFAM:SSF75632 |
| UniPathway:UPA00143 | UniParc:UPI0004EDFD23 | InterPro:WH-like_DNA-bd_sf | InterPro:WH_DNA-bd_sf | SEG:seg | : |
Description
BnaA10g01570D
Coordinates
chrLK031861:-:802250..805065
Molecular Weight (calculated)
85169.9 Da
IEP (calculated)
7.345
GRAVY (calculated)
-0.414
Length
729 amino acids
Sequence
(BLAST)
(BLAST)
001: MYRETIIDFE QGCKCLEAGV SELKRILEEE TTSETLIDPK QYLELYTTIY NMCIQKHPHD YSQRLYNKYR DIVEHYAKKT VLPSIQQKHD EYLLRELSRR
101: WGHYKVFVKW LSHFFNYLER FFISQRNQPP LLEVAMKSFR DRVYLEVQVS AKDVVIALIH KEREGEQIDR ELLKNVLDVF VQSGMGTIER YKEDLEMFLL
201: EETESYYARK ASSWIQECSC PEYMIKSEES LKKEKERVTH YLHSSTESKL VEIVQDILLV SVEKHLLEKE HSGCSALLRD DKIDDLSRMY MLYHPIPKGL
301: EPVADAFRVH VTREGNALIK QAQDAAANGS FIIDLHEKYM VYVMGCFKNH AFFHKALKEA FEVFCNKKVG GSYGPELLAN FCDSLFKKSG NDKLSDEAME
401: ATIDNVIKLL DYISDKDIFA EFYRKKLARR LLFDHHKVNK EHETSMITKL KRQQGGQYTS KMEGMVTDMQ LAKEFQKGFK GSLTKKPGGI DLAVTVLTTI
501: HWPSYKKSTD LNLPREMVQC VEAFNSYYQS ITTARKLSWI YSLGTCHVIG SFDPKPIELV LSTYQAVVLC LFNDTERLTC QEIIEQLNLS HEDLVRVLIS
601: LSCAKYRILN KEPASKSIAT TDVFEFNSKF TDTMRRIKVS IPPPSMEERE KVVEDVDRDR RYAIDACIVR IMKSRKVLPH QQLVAQCAEQ LSRMFKPDIK
701: MIKKRIEDLM ARDYLERDAE DHHIFKYVA
101: WGHYKVFVKW LSHFFNYLER FFISQRNQPP LLEVAMKSFR DRVYLEVQVS AKDVVIALIH KEREGEQIDR ELLKNVLDVF VQSGMGTIER YKEDLEMFLL
201: EETESYYARK ASSWIQECSC PEYMIKSEES LKKEKERVTH YLHSSTESKL VEIVQDILLV SVEKHLLEKE HSGCSALLRD DKIDDLSRMY MLYHPIPKGL
301: EPVADAFRVH VTREGNALIK QAQDAAANGS FIIDLHEKYM VYVMGCFKNH AFFHKALKEA FEVFCNKKVG GSYGPELLAN FCDSLFKKSG NDKLSDEAME
401: ATIDNVIKLL DYISDKDIFA EFYRKKLARR LLFDHHKVNK EHETSMITKL KRQQGGQYTS KMEGMVTDMQ LAKEFQKGFK GSLTKKPGGI DLAVTVLTTI
501: HWPSYKKSTD LNLPREMVQC VEAFNSYYQS ITTARKLSWI YSLGTCHVIG SFDPKPIELV LSTYQAVVLC LFNDTERLTC QEIIEQLNLS HEDLVRVLIS
601: LSCAKYRILN KEPASKSIAT TDVFEFNSKF TDTMRRIKVS IPPPSMEERE KVVEDVDRDR RYAIDACIVR IMKSRKVLPH QQLVAQCAEQ LSRMFKPDIK
701: MIKKRIEDLM ARDYLERDAE DHHIFKYVA
001: MAKKDSVLEA GWSVMEAGVA KLQKILEEVP DEPPFDPVQR MQLYTTVHNL CTQKPPNDYS QQIYDRYGGV YVDYNKQTVL PAIREKHGEY MLRELVKRWA
101: NQKILVRWLS HFFEYLDRFY TRRGSHPTLS AVGFISFRDL VYQELQSKAK DAVLALIHKE REGEQIDRAL LKNVIDVYCG NGMGELVKYE EDFESFLLED
201: SASYYSRNAS RWNQENSCPD YMIKAEESLR LEKERVTNYL HSTTEPKLVA KVQNELLVVV AKQLIENEHS GCRALLRDDK MDDLARMYRL YHPIPQGLDP
301: VADLFKQHIT VEGSALIKQA TEAATDKAAS TSGLKVQDQV LIRQLIDLHD KFMVYVDECF QKHSLFHKAL KEAFEVFCNK TVAGVSSAEI LATYCDNILK
401: TGGGIEKLEN EDLELTLEKV VKLLVYISDK DLFAEFFRKK QARRLLFDRN GNDYHERSLL TKFKELLGAQ FTSKMEGMLT DMTLAKEHQT NFVEFLSVNK
501: TKKLGMDFTV TVLTTGFWPS YKTTDLNLPI EMVNCVEAFK AYYGTKTNSR RLSWIYSLGT CQLAGKFDKK TIEIVVTTYQ AAVLLLFNNT ERLSYTEILE
601: QLNLGHEDLA RLLHSLSCLK YKILIKEPMS RNISNTDTFE FNSKFTDKMR RIRVPLPPMD ERKKIVEDVD KDRRYAIDAA LVRIMKSRKV LGHQQLVSEC
701: VEHLSKMFKP DIKMIKKRIE DLISRDYLER DTDNPNTFKY LA
101: NQKILVRWLS HFFEYLDRFY TRRGSHPTLS AVGFISFRDL VYQELQSKAK DAVLALIHKE REGEQIDRAL LKNVIDVYCG NGMGELVKYE EDFESFLLED
201: SASYYSRNAS RWNQENSCPD YMIKAEESLR LEKERVTNYL HSTTEPKLVA KVQNELLVVV AKQLIENEHS GCRALLRDDK MDDLARMYRL YHPIPQGLDP
301: VADLFKQHIT VEGSALIKQA TEAATDKAAS TSGLKVQDQV LIRQLIDLHD KFMVYVDECF QKHSLFHKAL KEAFEVFCNK TVAGVSSAEI LATYCDNILK
401: TGGGIEKLEN EDLELTLEKV VKLLVYISDK DLFAEFFRKK QARRLLFDRN GNDYHERSLL TKFKELLGAQ FTSKMEGMLT DMTLAKEHQT NFVEFLSVNK
501: TKKLGMDFTV TVLTTGFWPS YKTTDLNLPI EMVNCVEAFK AYYGTKTNSR RLSWIYSLGT CQLAGKFDKK TIEIVVTTYQ AAVLLLFNNT ERLSYTEILE
601: QLNLGHEDLA RLLHSLSCLK YKILIKEPMS RNISNTDTFE FNSKFTDKMR RIRVPLPPMD ERKKIVEDVD KDRRYAIDAA LVRIMKSRKV LGHQQLVSEC
701: VEHLSKMFKP DIKMIKKRIE DLISRDYLER DTDNPNTFKY LA
Arabidopsis Description
CUL2Cullin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRZ0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.