Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400013645 | Potato | cytosol | 19.38 | 71.79 |
| CDY72590 | Canola | cytosol | 20.42 | 62.77 |
| CDY51951 | Canola | cytosol | 76.12 | 29.85 |
| CDY32488 | Canola | cytosol | 72.32 | 28.32 |
| CDX93643 | Canola | cytosol | 47.06 | 26.93 |
| CDX89926 | Canola | cytosol | 64.01 | 25.73 |
| AT1G43140.1 | Thale cress | cytosol | 62.98 | 25.24 |
| CDY18013 | Canola | cytosol | 63.32 | 24.8 |
| CDX90932 | Canola | cytosol | 62.98 | 24.66 |
| CDY22060 | Canola | cytosol | 62.98 | 24.66 |
| AT1G02980.1 | Thale cress | cytosol | 62.98 | 24.53 |
| CDY21896 | Canola | cytosol | 62.63 | 24.53 |
| CDX89925 | Canola | cytosol | 59.17 | 23.46 |
| Solyc06g008710.1.1 | Tomato | cytosol | 55.02 | 21.4 |
| CDX67439 | Canola | cytosol | 51.56 | 21.19 |
| CDY11663 | Canola | cytosol | 50.52 | 20.77 |
| CDY16196 | Canola | cytosol | 33.91 | 13.39 |
| CDY50732 | Canola | cytosol | 33.91 | 13.39 |
| CDY45004 | Canola | cytosol | 33.56 | 13.25 |
| CDY46437 | Canola | cytosol | 33.56 | 13.25 |
| CDY33461 | Canola | cytosol | 34.6 | 13.14 |
| CDY43957 | Canola | cytosol | 34.95 | 13.02 |
| CDX87735 | Canola | cytosol | 34.95 | 12.95 |
| CDX77644 | Canola | cytosol | 34.26 | 12.91 |
| CDY35152 | Canola | plastid | 34.95 | 12.85 |
| CDY03235 | Canola | plastid | 34.95 | 12.78 |
| CDY18137 | Canola | cytosol | 62.63 | 12.34 |
| CDY22061 | Canola | mitochondrion | 6.92 | 7.84 |
| CDY21897 | Canola | mitochondrion | 6.92 | 7.84 |
| CDY51863 | Canola | cytosol | 10.38 | 6.94 |
| CDX91291 | Canola | nucleus | 0.35 | 0.82 |
| CDY37452 | Canola | cytosol | 0.35 | 0.76 |
Protein Annotations
| Gene3D:1.10.10.10 | Gene3D:1.10.10.2620 | MapMan:35.1 | GO:A0A078IPK0 | UniProt:A0A078IPK0 | EnsemblPlants:CDY51862 |
| ProteinID:CDY51862 | ProteinID:CDY51862.1 | InterPro:Cullin_N | InterPro:Cullin_homology | InterPro:Cullin_homology_sf | InterPro:Cullin_neddylation_domain |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009056 | GO:GO:0009987 | GO:GO:0019538 | GO:GO:0031625 | EnsemblPlantsGene:GSBRNA2T00004429001 | InterPro:IPR016158 |
| InterPro:IPR036388 | PFAM:PF00888 | PFAM:PF10557 | PFscan:PS50069 | PANTHER:PTHR11932 | PANTHER:PTHR11932:SF97 |
| SMART:SM00884 | SUPFAM:SSF46785 | SUPFAM:SSF75632 | UniPathway:UPA00143 | UniParc:UPI0004EE2FF9 | InterPro:WH-like_DNA-bd_sf |
| InterPro:WH_DNA-bd_sf | SEG:seg | : | : | : | : |
Description
BnaC03g77140DBnaC03g77140D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IPK0]
Coordinates
chrLK033035:-:56485..60279
Molecular Weight (calculated)
34040.2 Da
IEP (calculated)
9.271
GRAVY (calculated)
-0.534
Length
289 amino acids
Sequence
(BLAST)
(BLAST)
001: MLGASKRIEL RGEEEQWFSD RHVAGGGTGL LFLNPENSKS NQPTRAYLIC RVGYKTSDLN LPHEMVNCIE SFKAYYETKT KHMRLMWIYS LRICHLNGRF
101: DPKPIELIVG LFADVLCAFN NTERLTYQEL LEQLNLSHED LVRVLHSLSC AKYKFLKKEP ASKTISTTDS FEFNSKFTDK MRRIKVPLPP VDDRKKVVED
201: VDKDRHYAID ASLVRIMKSR KVLPHQQLVS ECVEQLINRM FKYSHKHWFH NECFLMPNIK MIKKRNEDLI SRDYLERDTE NPKTFKYVA
101: DPKPIELIVG LFADVLCAFN NTERLTYQEL LEQLNLSHED LVRVLHSLSC AKYKFLKKEP ASKTISTTDS FEFNSKFTDK MRRIKVPLPP VDDRKKVVED
201: VDKDRHYAID ASLVRIMKSR KVLPHQQLVS ECVEQLINRM FKYSHKHWFH NECFLMPNIK MIKKRNEDLI SRDYLERDTE NPKTFKYVA
001: MAKKDSVLEA GWSVMEAGVA KLQKILEEVP DEPPFDPVQR MQLYTTVHNL CTQKPPNDYS QQIYDRYGGV YVDYNKQTVL PAIREKHGEY MLRELVKRWA
101: NQKILVRWLS HFFEYLDRFY TRRGSHPTLS AVGFISFRDL VYQELQSKAK DAVLALIHKE REGEQIDRAL LKNVIDVYCG NGMGELVKYE EDFESFLLED
201: SASYYSRNAS RWNQENSCPD YMIKAEESLR LEKERVTNYL HSTTEPKLVA KVQNELLVVV AKQLIENEHS GCRALLRDDK MDDLARMYRL YHPIPQGLDP
301: VADLFKQHIT VEGSALIKQA TEAATDKAAS TSGLKVQDQV LIRQLIDLHD KFMVYVDECF QKHSLFHKAL KEAFEVFCNK TVAGVSSAEI LATYCDNILK
401: TGGGIEKLEN EDLELTLEKV VKLLVYISDK DLFAEFFRKK QARRLLFDRN GNDYHERSLL TKFKELLGAQ FTSKMEGMLT DMTLAKEHQT NFVEFLSVNK
501: TKKLGMDFTV TVLTTGFWPS YKTTDLNLPI EMVNCVEAFK AYYGTKTNSR RLSWIYSLGT CQLAGKFDKK TIEIVVTTYQ AAVLLLFNNT ERLSYTEILE
601: QLNLGHEDLA RLLHSLSCLK YKILIKEPMS RNISNTDTFE FNSKFTDKMR RIRVPLPPMD ERKKIVEDVD KDRRYAIDAA LVRIMKSRKV LGHQQLVSEC
701: VEHLSKMFKP DIKMIKKRIE DLISRDYLER DTDNPNTFKY LA
101: NQKILVRWLS HFFEYLDRFY TRRGSHPTLS AVGFISFRDL VYQELQSKAK DAVLALIHKE REGEQIDRAL LKNVIDVYCG NGMGELVKYE EDFESFLLED
201: SASYYSRNAS RWNQENSCPD YMIKAEESLR LEKERVTNYL HSTTEPKLVA KVQNELLVVV AKQLIENEHS GCRALLRDDK MDDLARMYRL YHPIPQGLDP
301: VADLFKQHIT VEGSALIKQA TEAATDKAAS TSGLKVQDQV LIRQLIDLHD KFMVYVDECF QKHSLFHKAL KEAFEVFCNK TVAGVSSAEI LATYCDNILK
401: TGGGIEKLEN EDLELTLEKV VKLLVYISDK DLFAEFFRKK QARRLLFDRN GNDYHERSLL TKFKELLGAQ FTSKMEGMLT DMTLAKEHQT NFVEFLSVNK
501: TKKLGMDFTV TVLTTGFWPS YKTTDLNLPI EMVNCVEAFK AYYGTKTNSR RLSWIYSLGT CQLAGKFDKK TIEIVVTTYQ AAVLLLFNNT ERLSYTEILE
601: QLNLGHEDLA RLLHSLSCLK YKILIKEPMS RNISNTDTFE FNSKFTDKMR RIRVPLPPMD ERKKIVEDVD KDRRYAIDAA LVRIMKSRKV LGHQQLVSEC
701: VEHLSKMFKP DIKMIKKRIE DLISRDYLER DTDNPNTFKY LA
Arabidopsis Description
CUL2Cullin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRZ0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.