Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX89926 | Canola | cytosol | 45.67 | 93.19 |
| CDX89925 | Canola | cytosol | 39.81 | 80.11 |
| CDY51951 | Canola | cytosol | 35.51 | 70.69 |
| PGSC0003DMT400013645 | Potato | cytosol | 3.75 | 70.51 |
| CDY32488 | Canola | cytosol | 34.97 | 69.51 |
| CDX90932 | Canola | cytosol | 33.95 | 67.48 |
| CDY18013 | Canola | cytosol | 33.88 | 67.34 |
| CDY22060 | Canola | cytosol | 33.74 | 67.07 |
| CDY21896 | Canola | cytosol | 33.74 | 67.07 |
| CDY72590 | Canola | cytosol | 4.09 | 63.83 |
| AT1G43140.1 | Thale cress | cytosol | 31.22 | 63.52 |
| CDY51863 | Canola | cytosol | 18.68 | 63.43 |
| CDY51862 | Canola | cytosol | 12.34 | 62.63 |
| AT1G02980.1 | Thale cress | cytosol | 31.49 | 62.26 |
| CDX93643 | Canola | cytosol | 19.5 | 56.63 |
| CDX67439 | Canola | cytosol | 25.7 | 53.63 |
| CDY11663 | Canola | cytosol | 25.56 | 53.34 |
| CDX91291 | Canola | nucleus | 4.43 | 53.28 |
| Solyc06g008710.1.1 | Tomato | cytosol | 26.31 | 51.95 |
| CDY37452 | Canola | cytosol | 4.09 | 45.8 |
| CDY45004 | Canola | cytosol | 15.61 | 31.28 |
| CDY50732 | Canola | cytosol | 15.61 | 31.28 |
| CDY16196 | Canola | cytosol | 15.61 | 31.28 |
| CDY46437 | Canola | cytosol | 15.54 | 31.15 |
| CDY33461 | Canola | cytosol | 14.52 | 27.99 |
| CDY43957 | Canola | cytosol | 14.72 | 27.84 |
| CDX87735 | Canola | cytosol | 14.72 | 27.69 |
| CDX77644 | Canola | cytosol | 14.45 | 27.64 |
| CDY35152 | Canola | plastid | 14.66 | 27.35 |
| CDY03235 | Canola | plastid | 14.72 | 27.34 |
| CDY22061 | Canola | mitochondrion | 3.75 | 21.57 |
| CDY21897 | Canola | mitochondrion | 3.75 | 21.57 |
Protein Annotations
| Gene3D:1.10.10.10 | Gene3D:1.10.10.2620 | Gene3D:1.20.1310.10 | MapMan:19.2.2.8.1.2 | GO:A0A078FZE0 | UniProt:A0A078FZE0 |
| EnsemblPlants:CDY18137 | ProteinID:CDY18137 | ProteinID:CDY18137.1 | InterPro:Cullin_CS | InterPro:Cullin_N | InterPro:Cullin_homology |
| InterPro:Cullin_homology_sf | InterPro:Cullin_neddylation_domain | InterPro:Cullin_repeat-like_dom_sf | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009056 | GO:GO:0009987 | GO:GO:0019538 | GO:GO:0031461 | GO:GO:0031625 | EnsemblPlantsGene:GSBRNA2T00002659001 |
| InterPro:IPR016158 | InterPro:IPR036388 | PFAM:PF00888 | PFAM:PF10557 | ScanProsite:PS01256 | PFscan:PS50069 |
| PANTHER:PTHR11932 | PANTHER:PTHR11932:SF97 | SMART:SM00182 | SMART:SM00884 | SUPFAM:SSF46785 | SUPFAM:SSF74788 |
| SUPFAM:SSF75632 | UniPathway:UPA00143 | UniParc:UPI0004EE8AD2 | InterPro:WH-like_DNA-bd_sf | InterPro:WH_DNA-bd_sf | SEG:seg |
Description
BnaC05g01600DBnaC05g01600D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FZE0]
Coordinates
chrLK032083:+:27880..34786
Molecular Weight (calculated)
171442.0 Da
IEP (calculated)
7.571
GRAVY (calculated)
-0.458
Length
1467 amino acids
Sequence
(BLAST)
(BLAST)
0001: MCSDTIIEYE QGCKCLETGV SKLTRILEEE TSEKPFNREQ YIEAYTTIYN MCIQEDPHNY SQRLYHKYHD IVEHYANETV LPCIQLKQDE YLLRELSRKW
0101: DHYKVFVKWL SHFFNYLERF FISYRNYPSL LEVAMKSFRD LVYLEVQVSV KDVVMALIHK EREGEQIERE LLKNIVDIFV QSGMGTMERY EKDFEMFLLE
0201: DTASYYSRKA SSWIQEDSCP EYMIKSEESL KKEKERVIHY LHSTTEPKLV EIVQEKLLVS VAKQLLEKEH LCALLRDDKM DDLSRIYRLF NPITKGLEPV
0301: AEAFRLHVTS EGNALIKQAQ DSATTGSIID LHDKYMVYVT DCFKNHTLFH KALKEAFEIF CNKKVGGSSS AELLATFCDN LFKKSGKSDE AIEAEIDNVK
0401: ISVVNLLDYI SDKDLFAEFY RKKLARRLLF DRKVNDEHER SMLTKLKGQH GGQFTSKMEG MVTDMELAKE NQKGFEGYLK AKPGGIDLAV TVLNTGFWPS
0501: YKTSTDLNLP REMVECVDAF NSYYQSKTTK RKLSWIYSLG TCHVIGRFDH KSIELVLFTY QAVVLCLFNN TERVTYQEII EQLNLSHEDL VRVLHSLSCS
0601: KYKILNKEPA SKSISTTDVF ELNTKFTDKM RRIKVPLPPA DDRKKVVEDV DKDRGYAIDA CIVRIMKSRK VLLHQQLVSE CVEQLSRMFK PDVKMIKKRI
0701: EELISREYLE RDTKNPNTFK YGFNNDAKDS PSLLLSSQKM YRATIIDFEQ GCKCLEAGVS ELKRILEEET SETRIDPKQY LELYTTIYNM CIQKHPHDHS
0801: QRLYNKYHDI VEHYAKKTVL PCVQQKHDEY LLRELSRRWD HYKVFVKWLS HFFNYLERFF IPQRNYPSLL EVAMKSFRNR VYLEVQVNAK DVVIALIDKE
0901: REGAQIDMEL LKNVLDIFVQ SGMGTIERYK EDFEMFLLEE TESYYARKAS RWIQECSCPE YMIKSEESLK KEKERVTHYL HSSTESKLVE IVQDILLVSV
1001: EKHLLEKEHS GCSALLRDDK TDDLSRMYRL YHPTPKGLEP VADAFRIHVT REGNALIKQA QDAATTGSLI IDLHEKYMVY VMDCFKNHTL FHKALKEAFE
1101: VFCNKKVAGS SSAELVANFC DSLFKKSGND KLSDEAMEAT IDNVVKLLDY ISDKDIFSEF YRKKLGRRLL FDHHKVNKEH ETSMITKLKR QQGGQYTSKM
1201: EGMVTDMQLA KEFQKGFKGS LTAKPGGIDL AVTVLNTGFW PSYKTSTDLN LPREMVECVE AFKSYYGTKT NQRKLRWLYS HGTCHVIGSF DPKPIELVLS
1301: TYQAVVLCLF NNTERLTYQE IIEQLNLSHE DLVRVLLSLS CAKYRILNKE PASKSISTTD VFEFNSKFTS TMRRIKVSIP PPPIDERKKV VEDVDQDRRY
1401: AIDACIVRIM KSRKVLPHQQ LVSQCVEQLS RMFKPDIKMI KKRIEDLITR DYLKRDAKNH HIFNYVA
0101: DHYKVFVKWL SHFFNYLERF FISYRNYPSL LEVAMKSFRD LVYLEVQVSV KDVVMALIHK EREGEQIERE LLKNIVDIFV QSGMGTMERY EKDFEMFLLE
0201: DTASYYSRKA SSWIQEDSCP EYMIKSEESL KKEKERVIHY LHSTTEPKLV EIVQEKLLVS VAKQLLEKEH LCALLRDDKM DDLSRIYRLF NPITKGLEPV
0301: AEAFRLHVTS EGNALIKQAQ DSATTGSIID LHDKYMVYVT DCFKNHTLFH KALKEAFEIF CNKKVGGSSS AELLATFCDN LFKKSGKSDE AIEAEIDNVK
0401: ISVVNLLDYI SDKDLFAEFY RKKLARRLLF DRKVNDEHER SMLTKLKGQH GGQFTSKMEG MVTDMELAKE NQKGFEGYLK AKPGGIDLAV TVLNTGFWPS
0501: YKTSTDLNLP REMVECVDAF NSYYQSKTTK RKLSWIYSLG TCHVIGRFDH KSIELVLFTY QAVVLCLFNN TERVTYQEII EQLNLSHEDL VRVLHSLSCS
0601: KYKILNKEPA SKSISTTDVF ELNTKFTDKM RRIKVPLPPA DDRKKVVEDV DKDRGYAIDA CIVRIMKSRK VLLHQQLVSE CVEQLSRMFK PDVKMIKKRI
0701: EELISREYLE RDTKNPNTFK YGFNNDAKDS PSLLLSSQKM YRATIIDFEQ GCKCLEAGVS ELKRILEEET SETRIDPKQY LELYTTIYNM CIQKHPHDHS
0801: QRLYNKYHDI VEHYAKKTVL PCVQQKHDEY LLRELSRRWD HYKVFVKWLS HFFNYLERFF IPQRNYPSLL EVAMKSFRNR VYLEVQVNAK DVVIALIDKE
0901: REGAQIDMEL LKNVLDIFVQ SGMGTIERYK EDFEMFLLEE TESYYARKAS RWIQECSCPE YMIKSEESLK KEKERVTHYL HSSTESKLVE IVQDILLVSV
1001: EKHLLEKEHS GCSALLRDDK TDDLSRMYRL YHPTPKGLEP VADAFRIHVT REGNALIKQA QDAATTGSLI IDLHEKYMVY VMDCFKNHTL FHKALKEAFE
1101: VFCNKKVAGS SSAELVANFC DSLFKKSGND KLSDEAMEAT IDNVVKLLDY ISDKDIFSEF YRKKLGRRLL FDHHKVNKEH ETSMITKLKR QQGGQYTSKM
1201: EGMVTDMQLA KEFQKGFKGS LTAKPGGIDL AVTVLNTGFW PSYKTSTDLN LPREMVECVE AFKSYYGTKT NQRKLRWLYS HGTCHVIGSF DPKPIELVLS
1301: TYQAVVLCLF NNTERLTYQE IIEQLNLSHE DLVRVLLSLS CAKYRILNKE PASKSISTTD VFEFNSKFTS TMRRIKVSIP PPPIDERKKV VEDVDQDRRY
1401: AIDACIVRIM KSRKVLPHQQ LVSQCVEQLS RMFKPDIKMI KKRIEDLITR DYLKRDAKNH HIFNYVA
001: MAKKDSVLEA GWSVMEAGVA KLQKILEEVP DEPPFDPVQR MQLYTTVHNL CTQKPPNDYS QQIYDRYGGV YVDYNKQTVL PAIREKHGEY MLRELVKRWA
101: NQKILVRWLS HFFEYLDRFY TRRGSHPTLS AVGFISFRDL VYQELQSKAK DAVLALIHKE REGEQIDRAL LKNVIDVYCG NGMGELVKYE EDFESFLLED
201: SASYYSRNAS RWNQENSCPD YMIKAEESLR LEKERVTNYL HSTTEPKLVA KVQNELLVVV AKQLIENEHS GCRALLRDDK MDDLARMYRL YHPIPQGLDP
301: VADLFKQHIT VEGSALIKQA TEAATDKAAS TSGLKVQDQV LIRQLIDLHD KFMVYVDECF QKHSLFHKAL KEAFEVFCNK TVAGVSSAEI LATYCDNILK
401: TGGGIEKLEN EDLELTLEKV VKLLVYISDK DLFAEFFRKK QARRLLFDRN GNDYHERSLL TKFKELLGAQ FTSKMEGMLT DMTLAKEHQT NFVEFLSVNK
501: TKKLGMDFTV TVLTTGFWPS YKTTDLNLPI EMVNCVEAFK AYYGTKTNSR RLSWIYSLGT CQLAGKFDKK TIEIVVTTYQ AAVLLLFNNT ERLSYTEILE
601: QLNLGHEDLA RLLHSLSCLK YKILIKEPMS RNISNTDTFE FNSKFTDKMR RIRVPLPPMD ERKKIVEDVD KDRRYAIDAA LVRIMKSRKV LGHQQLVSEC
701: VEHLSKMFKP DIKMIKKRIE DLISRDYLER DTDNPNTFKY LA
101: NQKILVRWLS HFFEYLDRFY TRRGSHPTLS AVGFISFRDL VYQELQSKAK DAVLALIHKE REGEQIDRAL LKNVIDVYCG NGMGELVKYE EDFESFLLED
201: SASYYSRNAS RWNQENSCPD YMIKAEESLR LEKERVTNYL HSTTEPKLVA KVQNELLVVV AKQLIENEHS GCRALLRDDK MDDLARMYRL YHPIPQGLDP
301: VADLFKQHIT VEGSALIKQA TEAATDKAAS TSGLKVQDQV LIRQLIDLHD KFMVYVDECF QKHSLFHKAL KEAFEVFCNK TVAGVSSAEI LATYCDNILK
401: TGGGIEKLEN EDLELTLEKV VKLLVYISDK DLFAEFFRKK QARRLLFDRN GNDYHERSLL TKFKELLGAQ FTSKMEGMLT DMTLAKEHQT NFVEFLSVNK
501: TKKLGMDFTV TVLTTGFWPS YKTTDLNLPI EMVNCVEAFK AYYGTKTNSR RLSWIYSLGT CQLAGKFDKK TIEIVVTTYQ AAVLLLFNNT ERLSYTEILE
601: QLNLGHEDLA RLLHSLSCLK YKILIKEPMS RNISNTDTFE FNSKFTDKMR RIRVPLPPMD ERKKIVEDVD KDRRYAIDAA LVRIMKSRKV LGHQQLVSEC
701: VEHLSKMFKP DIKMIKKRIE DLISRDYLER DTDNPNTFKY LA
Arabidopsis Description
CUL2Cullin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRZ0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.