Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra034597.1-P | Field mustard | cytosol | 98.1 | 98.91 |
| CDY32488 | Canola | cytosol | 87.25 | 87.13 |
| CDY51863 | Canola | cytosol | 50.2 | 85.65 |
| PGSC0003DMT400013645 | Potato | cytosol | 8.28 | 78.21 |
| CDY51862 | Canola | cytosol | 29.85 | 76.12 |
| CDY37452 | Canola | cytosol | 13.43 | 75.57 |
| CDX89926 | Canola | cytosol | 70.15 | 71.91 |
| CDY22060 | Canola | cytosol | 71.64 | 71.54 |
| CDX90932 | Canola | cytosol | 71.51 | 71.41 |
| CDY21896 | Canola | cytosol | 71.51 | 71.41 |
| CDY18013 | Canola | cytosol | 71.51 | 71.41 |
| CDX89925 | Canola | cytosol | 67.84 | 68.59 |
| CDY72590 | Canola | cytosol | 8.68 | 68.09 |
| AT1G02980.1 | Thale cress | cytosol | 66.76 | 66.31 |
| AT1G43140.1 | Thale cress | cytosol | 64.31 | 65.74 |
| CDX91291 | Canola | nucleus | 10.04 | 60.66 |
| CDX93643 | Canola | cytosol | 39.48 | 57.62 |
| CDX67439 | Canola | cytosol | 54.14 | 56.76 |
| CDY11663 | Canola | cytosol | 53.46 | 56.05 |
| Solyc06g008710.1.1 | Tomato | cytosol | 55.22 | 54.78 |
| CDY18137 | Canola | cytosol | 70.69 | 35.51 |
| CDY16196 | Canola | cytosol | 31.89 | 32.1 |
| CDY50732 | Canola | cytosol | 31.89 | 32.1 |
| CDY45004 | Canola | cytosol | 31.89 | 32.1 |
| CDY46437 | Canola | cytosol | 31.75 | 31.97 |
| CDY33461 | Canola | cytosol | 29.85 | 28.91 |
| CDY43957 | Canola | cytosol | 30.26 | 28.74 |
| CDX87735 | Canola | cytosol | 30.26 | 28.59 |
| CDY35152 | Canola | plastid | 30.39 | 28.5 |
| CDX77644 | Canola | cytosol | 29.58 | 28.42 |
| CDY03235 | Canola | plastid | 30.39 | 28.35 |
| CDY22061 | Canola | mitochondrion | 7.87 | 22.75 |
| CDY21897 | Canola | mitochondrion | 7.87 | 22.75 |
Protein Annotations
| Gene3D:1.10.10.10 | Gene3D:1.10.10.2620 | Gene3D:1.20.1310.10 | MapMan:19.2.2.8.1.2 | GO:A0A078IPR9 | UniProt:A0A078IPR9 |
| EnsemblPlants:CDY51951 | ProteinID:CDY51951 | ProteinID:CDY51951.1 | InterPro:Cullin_N | InterPro:Cullin_homology | InterPro:Cullin_homology_sf |
| InterPro:Cullin_neddylation_domain | InterPro:Cullin_repeat-like_dom_sf | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006511 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0019538 | GO:GO:0031625 |
| EnsemblPlantsGene:GSBRNA2T00004540001 | InterPro:IPR016158 | InterPro:IPR036388 | PFAM:PF00888 | PFAM:PF10557 | PFscan:PS50069 |
| PANTHER:PTHR11932 | PANTHER:PTHR11932:SF97 | SMART:SM00182 | SMART:SM00884 | SUPFAM:SSF46785 | SUPFAM:SSF74788 |
| SUPFAM:SSF75632 | UniPathway:UPA00143 | UniParc:UPI0004EE269D | InterPro:WH-like_DNA-bd_sf | InterPro:WH_DNA-bd_sf | SEG:seg |
Description
BnaA08g11670DBnaA08g11670D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IPR9]
Coordinates
chrLK033041:-:43145..46079
Molecular Weight (calculated)
85944.3 Da
IEP (calculated)
7.894
GRAVY (calculated)
-0.501
Length
737 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRQKVKPMT MDQGFELIDA AVTKLKRILE GKPEPAFGSH EYIENYTIVY NMCTQKPPDD LSQQLYDKYG GIFEDYDKHT MLPSIMEKHD EYMLRELSRM
101: WDINKIMVRW LSHFFFYLDR YFITRRSLPS LTEVGMTCFR DHVYNNVHFN VKQVIIALIH KEREGQQVDS ALLKNILDLF VQSGKGSMER YEDDFEKFFL
201: QETASYYSRR SSSWILEDSC PEYMIKSEES LKKEKERVTH YLHSTTEPKL VEVVQTRLLV LVAKQLLEKE SSGCSALLRD DKIDDLSRMY RLYHEIPKGL
301: EPVAKAFRLH VTSEGNGLIK QAEDAATSGS VEEQVLVRKI IDLHDKYMAY VTDCFQNHTL FHKALKEAFE IFCNKKVAGS SSAELLATFC DNLFKKAGND
401: KSNDDSTIES TIDNVVKLLD YISDKDLFAE FYRKKQARRL LFGKFNDEHE RSILTKLKGQ FGGQFTSKME GMVTDMQLAK DQQTGFEEHI KNGNTGKPKG
501: VDFTVNVLTT GFWPSYKTSD LNLPLEMVNC IESFKAYYET KTKHRRLMWI YSLGICHLNG RFDPKPIELI VSTYQAAVLC AFNNTERLTY QELFEQLNLS
601: HEDLVRVLHS LSCAKYKFLK KEPASKTISK TDSFEFNSKF TDKMRRIKVP LPPVDDRKKV VEDVDKDRRY AIDASLVRIM KSRKVLPHQQ LVSECVEQLS
701: RMFKPDIKMI KKRIEDLISR DYLERDIENP NTFKYVA
101: WDINKIMVRW LSHFFFYLDR YFITRRSLPS LTEVGMTCFR DHVYNNVHFN VKQVIIALIH KEREGQQVDS ALLKNILDLF VQSGKGSMER YEDDFEKFFL
201: QETASYYSRR SSSWILEDSC PEYMIKSEES LKKEKERVTH YLHSTTEPKL VEVVQTRLLV LVAKQLLEKE SSGCSALLRD DKIDDLSRMY RLYHEIPKGL
301: EPVAKAFRLH VTSEGNGLIK QAEDAATSGS VEEQVLVRKI IDLHDKYMAY VTDCFQNHTL FHKALKEAFE IFCNKKVAGS SSAELLATFC DNLFKKAGND
401: KSNDDSTIES TIDNVVKLLD YISDKDLFAE FYRKKQARRL LFGKFNDEHE RSILTKLKGQ FGGQFTSKME GMVTDMQLAK DQQTGFEEHI KNGNTGKPKG
501: VDFTVNVLTT GFWPSYKTSD LNLPLEMVNC IESFKAYYET KTKHRRLMWI YSLGICHLNG RFDPKPIELI VSTYQAAVLC AFNNTERLTY QELFEQLNLS
601: HEDLVRVLHS LSCAKYKFLK KEPASKTISK TDSFEFNSKF TDKMRRIKVP LPPVDDRKKV VEDVDKDRRY AIDASLVRIM KSRKVLPHQQ LVSECVEQLS
701: RMFKPDIKMI KKRIEDLISR DYLERDIENP NTFKYVA
001: MERKTIDLEQ GWDYMQTGIT KLKRILEGLN EPAFDSEQYM MLYTTIYNMC TQKPPHDYSQ QLYDKYREAF EEYINSTVLP ALREKHDEFM LRELFKRWSN
101: HKVMVRWLSR FFYYLDRYFI ARRSLPPLNE VGLTCFRDLV YNELHSKVKQ AVIALVDKER EGEQIDRALL KNVLDIYVEI GMGQMERYEE DFESFMLQDT
201: SSYYSRKASS WIQEDSCPDY MLKSEECLKK ERERVAHYLH SSSEPKLVEK VQHELLVVFA SQLLEKEHSG CRALLRDDKV DDLSRMYRLY HKILRGLEPV
301: ANIFKQHVTA EGNALVQQAE DTATNQVANT ASVQEQVLIR KVIELHDKYM VYVTECFQNH TLFHKALKEA FEIFCNKTVA GSSSAELLAT FCDNILKKGG
401: SEKLSDEAIE DTLEKVVKLL AYISDKDLFA EFYRKKLARR LLFDRSANDD HERSILTKLK QQCGGQFTSK MEGMVTDLTL ARENQNSFED YLGSNPAANP
501: GIDLTVTVLT TGFWPSYKSF DINLPSEMIK CVEVFKGFYE TKTKHRKLTW IYSLGTCHIN GKFDQKAIEL IVSTYQAAVL LLFNTTDKLS YTEILAQLNL
601: SHEDLVRLLH SLSCAKYKIL LKEPNTKTVS QNDAFEFNSK FTDRMRRIKI PLPPVDERKK VVEDVDKDRR YAIDAAIVRI MKSRKVLGHQ QLVSECVEQL
701: SRMFKPDIKA IKKRMEDLIT RDYLERDKEN PNMFRYLA
101: HKVMVRWLSR FFYYLDRYFI ARRSLPPLNE VGLTCFRDLV YNELHSKVKQ AVIALVDKER EGEQIDRALL KNVLDIYVEI GMGQMERYEE DFESFMLQDT
201: SSYYSRKASS WIQEDSCPDY MLKSEECLKK ERERVAHYLH SSSEPKLVEK VQHELLVVFA SQLLEKEHSG CRALLRDDKV DDLSRMYRLY HKILRGLEPV
301: ANIFKQHVTA EGNALVQQAE DTATNQVANT ASVQEQVLIR KVIELHDKYM VYVTECFQNH TLFHKALKEA FEIFCNKTVA GSSSAELLAT FCDNILKKGG
401: SEKLSDEAIE DTLEKVVKLL AYISDKDLFA EFYRKKLARR LLFDRSANDD HERSILTKLK QQCGGQFTSK MEGMVTDLTL ARENQNSFED YLGSNPAANP
501: GIDLTVTVLT TGFWPSYKSF DINLPSEMIK CVEVFKGFYE TKTKHRKLTW IYSLGTCHIN GKFDQKAIEL IVSTYQAAVL LLFNTTDKLS YTEILAQLNL
601: SHEDLVRLLH SLSCAKYKIL LKEPNTKTVS QNDAFEFNSK FTDRMRRIKI PLPPVDERKK VVEDVDKDRR YAIDAAIVRI MKSRKVLGHQ QLVSECVEQL
701: SRMFKPDIKA IKKRMEDLIT RDYLERDKEN PNMFRYLA
Arabidopsis Description
CUL1AT4G02570 protein [Source:UniProtKB/TrEMBL;Acc:B9DGE3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.