Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX67439 | Canola | cytosol | 95.45 | 95.45 |
| PGSC0003DMT400013645 | Potato | cytosol | 7.68 | 69.23 |
| CDX93643 | Canola | cytosol | 48.22 | 67.13 |
| CDY22060 | Canola | cytosol | 70.41 | 67.07 |
| CDY21896 | Canola | cytosol | 70.27 | 66.94 |
| CDY18013 | Canola | cytosol | 70.13 | 66.8 |
| CDX90932 | Canola | cytosol | 70.13 | 66.8 |
| CDY72590 | Canola | cytosol | 8.82 | 65.96 |
| CDX91291 | Canola | nucleus | 9.53 | 54.92 |
| CDY32488 | Canola | cytosol | 56.76 | 54.06 |
| CDY51951 | Canola | cytosol | 56.05 | 53.46 |
| CDX89926 | Canola | cytosol | 53.49 | 52.29 |
| CDY51862 | Canola | cytosol | 20.77 | 50.52 |
| CDX89925 | Canola | cytosol | 51.78 | 49.93 |
| Solyc06g008710.1.1 | Tomato | cytosol | 50.64 | 47.91 |
| CDY51863 | Canola | cytosol | 27.17 | 44.21 |
| CDY37452 | Canola | cytosol | 7.25 | 38.93 |
| CDY45004 | Canola | cytosol | 30.16 | 28.96 |
| CDY46437 | Canola | cytosol | 30.16 | 28.96 |
| CDY16196 | Canola | cytosol | 30.01 | 28.83 |
| CDY50732 | Canola | cytosol | 30.01 | 28.83 |
| CDY33461 | Canola | cytosol | 29.16 | 26.94 |
| CDX77644 | Canola | cytosol | 28.88 | 26.47 |
| CDY35152 | Canola | plastid | 29.45 | 26.34 |
| CDY03235 | Canola | plastid | 29.45 | 26.2 |
| CDY43957 | Canola | cytosol | 28.88 | 26.16 |
| CDX87735 | Canola | cytosol | 28.88 | 26.03 |
| CDY18137 | Canola | cytosol | 53.34 | 25.56 |
| CDY22061 | Canola | mitochondrion | 7.68 | 21.18 |
| CDY21897 | Canola | mitochondrion | 7.68 | 21.18 |
Protein Annotations
| Gene3D:1.10.10.10 | Gene3D:1.10.10.2620 | Gene3D:1.20.1310.10 | MapMan:19.2.2.8.1.2 | GO:A0A078FHV2 | UniProt:A0A078FHV2 |
| EnsemblPlants:CDY11663 | ProteinID:CDY11663 | ProteinID:CDY11663.1 | InterPro:Cullin_N | InterPro:Cullin_homology | InterPro:Cullin_homology_sf |
| InterPro:Cullin_neddylation_domain | InterPro:Cullin_repeat-like_dom_sf | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006511 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0019538 | GO:GO:0031625 |
| EnsemblPlantsGene:GSBRNA2T00049811001 | InterPro:IPR016158 | InterPro:IPR036388 | PFAM:PF00888 | PFAM:PF10557 | PFscan:PS50069 |
| PANTHER:PTHR11932 | PANTHER:PTHR11932:SF97 | SMART:SM00182 | SMART:SM00884 | SUPFAM:SSF46785 | SUPFAM:SSF74788 |
| SUPFAM:SSF75632 | UniPathway:UPA00143 | UniParc:UPI0004EC86F5 | InterPro:WH-like_DNA-bd_sf | InterPro:WH_DNA-bd_sf | SEG:seg |
Description
BnaC06g12710DBnaC06g12710D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FHV2]
Coordinates
chrLK032013:+:66045..68156
Molecular Weight (calculated)
81915.0 Da
IEP (calculated)
8.783
GRAVY (calculated)
-0.390
Length
703 amino acids
Sequence
(BLAST)
(BLAST)
001: MMARTIDFAQ GWRSMQIGIT KLEKHVEGLP GHSLNSEQYI NLYTTVYVMC TQKPPHDHAE KLYNKYREVV EEYTKSTVLP ALRKTYDDEY MLLRVLLERC
101: SIHKKMVRRL SRIFHYVDRY FVVRNSLLSL EEVGLACFVD MVYNTLQLRV REAVIAIVDK EREGDDTGID RALLENVKDI YVEIGMGKMK RYEQDLESFM
201: LEGTASYYSR KASRWIQEYS YFDYIRKSEE CVKKEKKRVS HYLYASSEPK LVKIVEHELF VVYANKLLEK KHSEFREIAG GLEPITNIFK QHVEDTDGQD
301: TAAIRKVIEV HDKYIVYVTK CLENQTIFHK SLKEAFKFFC SKAVSGSSLS DESLATICDR IIILKKWASE ELSDEAIEKV VKFLAYISDD KDLFAEFYKK
401: KLARRLLLNR DASDDHERGI ITKLKQQFGG NFTYKMEGMV TDLTLSRQNQ NSFDEYVANN PAAKPGIDLS VTLLTTSVWP SYKTFDVNLP SEMVKCVEIF
501: KVFYETKHKR RKLTWLHSLE TCHINGKFDQ KPIDLIVSTH QAAVLLLFNT RDKLNYTDIQ TQLNLRHEDL VWVLHSLSCA KYKVLIKEPA TETVSKTDVF
601: EVNSKFTSRT GGVKIPLSHV DERKKVVEYV NNDRRYAIEA SIVRIMKGKK VLGHEQLVSE CVKQLSGMFK PDVKAIKTRI EELIARDYLE RDKMNPNMFR
701: YLA
101: SIHKKMVRRL SRIFHYVDRY FVVRNSLLSL EEVGLACFVD MVYNTLQLRV REAVIAIVDK EREGDDTGID RALLENVKDI YVEIGMGKMK RYEQDLESFM
201: LEGTASYYSR KASRWIQEYS YFDYIRKSEE CVKKEKKRVS HYLYASSEPK LVKIVEHELF VVYANKLLEK KHSEFREIAG GLEPITNIFK QHVEDTDGQD
301: TAAIRKVIEV HDKYIVYVTK CLENQTIFHK SLKEAFKFFC SKAVSGSSLS DESLATICDR IIILKKWASE ELSDEAIEKV VKFLAYISDD KDLFAEFYKK
401: KLARRLLLNR DASDDHERGI ITKLKQQFGG NFTYKMEGMV TDLTLSRQNQ NSFDEYVANN PAAKPGIDLS VTLLTTSVWP SYKTFDVNLP SEMVKCVEIF
501: KVFYETKHKR RKLTWLHSLE TCHINGKFDQ KPIDLIVSTH QAAVLLLFNT RDKLNYTDIQ TQLNLRHEDL VWVLHSLSCA KYKVLIKEPA TETVSKTDVF
601: EVNSKFTSRT GGVKIPLSHV DERKKVVEYV NNDRRYAIEA SIVRIMKGKK VLGHEQLVSE CVKQLSGMFK PDVKAIKTRI EELIARDYLE RDKMNPNMFR
701: YLA
001: MAKKDSVLEA GWSVMEAGVA KLQKILEEVP DEPPFDPVQR MQLYTTVHNL CTQKPPNDYS QQIYDRYGGV YVDYNKQTVL PAIREKHGEY MLRELVKRWA
101: NQKILVRWLS HFFEYLDRFY TRRGSHPTLS AVGFISFRDL VYQELQSKAK DAVLALIHKE REGEQIDRAL LKNVIDVYCG NGMGELVKYE EDFESFLLED
201: SASYYSRNAS RWNQENSCPD YMIKAEESLR LEKERVTNYL HSTTEPKLVA KVQNELLVVV AKQLIENEHS GCRALLRDDK MDDLARMYRL YHPIPQGLDP
301: VADLFKQHIT VEGSALIKQA TEAATDKAAS TSGLKVQDQV LIRQLIDLHD KFMVYVDECF QKHSLFHKAL KEAFEVFCNK TVAGVSSAEI LATYCDNILK
401: TGGGIEKLEN EDLELTLEKV VKLLVYISDK DLFAEFFRKK QARRLLFDRN GNDYHERSLL TKFKELLGAQ FTSKMEGMLT DMTLAKEHQT NFVEFLSVNK
501: TKKLGMDFTV TVLTTGFWPS YKTTDLNLPI EMVNCVEAFK AYYGTKTNSR RLSWIYSLGT CQLAGKFDKK TIEIVVTTYQ AAVLLLFNNT ERLSYTEILE
601: QLNLGHEDLA RLLHSLSCLK YKILIKEPMS RNISNTDTFE FNSKFTDKMR RIRVPLPPMD ERKKIVEDVD KDRRYAIDAA LVRIMKSRKV LGHQQLVSEC
701: VEHLSKMFKP DIKMIKKRIE DLISRDYLER DTDNPNTFKY LA
101: NQKILVRWLS HFFEYLDRFY TRRGSHPTLS AVGFISFRDL VYQELQSKAK DAVLALIHKE REGEQIDRAL LKNVIDVYCG NGMGELVKYE EDFESFLLED
201: SASYYSRNAS RWNQENSCPD YMIKAEESLR LEKERVTNYL HSTTEPKLVA KVQNELLVVV AKQLIENEHS GCRALLRDDK MDDLARMYRL YHPIPQGLDP
301: VADLFKQHIT VEGSALIKQA TEAATDKAAS TSGLKVQDQV LIRQLIDLHD KFMVYVDECF QKHSLFHKAL KEAFEVFCNK TVAGVSSAEI LATYCDNILK
401: TGGGIEKLEN EDLELTLEKV VKLLVYISDK DLFAEFFRKK QARRLLFDRN GNDYHERSLL TKFKELLGAQ FTSKMEGMLT DMTLAKEHQT NFVEFLSVNK
501: TKKLGMDFTV TVLTTGFWPS YKTTDLNLPI EMVNCVEAFK AYYGTKTNSR RLSWIYSLGT CQLAGKFDKK TIEIVVTTYQ AAVLLLFNNT ERLSYTEILE
601: QLNLGHEDLA RLLHSLSCLK YKILIKEPMS RNISNTDTFE FNSKFTDKMR RIRVPLPPMD ERKKIVEDVD KDRRYAIDAA LVRIMKSRKV LGHQQLVSEC
701: VEHLSKMFKP DIKMIKKRIE DLISRDYLER DTDNPNTFKY LA
Arabidopsis Description
CUL2Cullin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRZ0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.