Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400023105 | Potato | cytosol | 87.63 | 46.21 |
| PGSC0003DMT400023111 | Potato | cytosol | 86.96 | 35.23 |
| PGSC0003DMT400022865 | Potato | cytosol | 86.29 | 35.1 |
| PGSC0003DMT400029607 | Potato | cytosol | 82.61 | 33.42 |
| PGSC0003DMT400061802 | Potato | cytosol | 81.94 | 33.33 |
| PGSC0003DMT400016765 | Potato | cytosol | 33.11 | 13.49 |
| PGSC0003DMT400003338 | Potato | cytosol | 32.78 | 13.37 |
| PGSC0003DMT400097727 | Potato | cytosol | 3.01 | 5.23 |
| PGSC0003DMT400013645 | Potato | cytosol | 0.67 | 2.56 |
| PGSC0003DMT400063662 | Potato | cytosol | 2.34 | 2.41 |
| KXG35165 | Sorghum | cytosol | 0.0 | 0.0 |
| PGSC0003DMT400038140 | Potato | cytosol | 0.0 | 0.0 |
| PGSC0003DMT400085888 | Potato | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.10.10.2620 | Gene3D:1.20.1310.10 | MapMan:35.1 | InterPro:Cullin_N | InterPro:Cullin_homology | InterPro:Cullin_homology_sf |
| InterPro:Cullin_repeat-like_dom_sf | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006511 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0019538 | GO:GO:0031625 | InterPro:IPR016158 |
| UniProt:M1CUF5 | PFAM:PF00888 | EnsemblPlantsGene:PGSC0003DMG400029160 | PGSC:PGSC0003DMG400029160 | EnsemblPlants:PGSC0003DMT400074970 | PFscan:PS50069 |
| PANTHER:PTHR11932 | PANTHER:PTHR11932:SF124 | SMART:SM00182 | SUPFAM:SSF74788 | SUPFAM:SSF75632 | UniParc:UPI000295E2B7 |
Description
Cullin 1 [Source:PGSC_GENE;Acc:PGSC0003DMG400029160]
Coordinates
chr10:-:19185879..19188810
Molecular Weight (calculated)
33847.6 Da
IEP (calculated)
7.933
GRAVY (calculated)
-0.160
Length
299 amino acids
Sequence
(BLAST)
(BLAST)
001: MFKQHVVAQG MVLVQQAEDT ANSNSETPFF VIKLVELYDM AYVTNCFANN SLFHKALKEA FKVFCNKIVS GFSSAELLAS YCDNILKKGG SEKLSDDAIE
101: TLDKVVKLLV YINDRPYLFA EFSRKKLSRR LLFDKSANDD HERLILTKLK QQCGGQFTSK MEGMLIDLTL AKENQNNFQE YLSNNSSPGI DLTVTVLTSG
201: SWPSYKSCDL SLPVEMAKCV QVFNEFYQTK TKHRKLTWIY SLGTCNVNGK FDSKTIELIL GTYQAAVLLL FNSSDRLSYS CWKTYMHSVG ISGSYCLHE
101: TLDKVVKLLV YINDRPYLFA EFSRKKLSRR LLFDKSANDD HERLILTKLK QQCGGQFTSK MEGMLIDLTL AKENQNNFQE YLSNNSSPGI DLTVTVLTSG
201: SWPSYKSCDL SLPVEMAKCV QVFNEFYQTK TKHRKLTWIY SLGTCNVNGK FDSKTIELIL GTYQAAVLLL FNSSDRLSYS CWKTYMHSVG ISGSYCLHE
001: MAKKDSVLEA GWSVMEAGVA KLQKILEEVP DEPPFDPVQR MQLYTTVHNL CTQKPPNDYS QQIYDRYGGV YVDYNKQTVL PAIREKHGEY MLRELVKRWA
101: NQKILVRWLS HFFEYLDRFY TRRGSHPTLS AVGFISFRDL VYQELQSKAK DAVLALIHKE REGEQIDRAL LKNVIDVYCG NGMGELVKYE EDFESFLLED
201: SASYYSRNAS RWNQENSCPD YMIKAEESLR LEKERVTNYL HSTTEPKLVA KVQNELLVVV AKQLIENEHS GCRALLRDDK MDDLARMYRL YHPIPQGLDP
301: VADLFKQHIT VEGSALIKQA TEAATDKAAS TSGLKVQDQV LIRQLIDLHD KFMVYVDECF QKHSLFHKAL KEAFEVFCNK TVAGVSSAEI LATYCDNILK
401: TGGGIEKLEN EDLELTLEKV VKLLVYISDK DLFAEFFRKK QARRLLFDRN GNDYHERSLL TKFKELLGAQ FTSKMEGMLT DMTLAKEHQT NFVEFLSVNK
501: TKKLGMDFTV TVLTTGFWPS YKTTDLNLPI EMVNCVEAFK AYYGTKTNSR RLSWIYSLGT CQLAGKFDKK TIEIVVTTYQ AAVLLLFNNT ERLSYTEILE
601: QLNLGHEDLA RLLHSLSCLK YKILIKEPMS RNISNTDTFE FNSKFTDKMR RIRVPLPPMD ERKKIVEDVD KDRRYAIDAA LVRIMKSRKV LGHQQLVSEC
701: VEHLSKMFKP DIKMIKKRIE DLISRDYLER DTDNPNTFKY LA
101: NQKILVRWLS HFFEYLDRFY TRRGSHPTLS AVGFISFRDL VYQELQSKAK DAVLALIHKE REGEQIDRAL LKNVIDVYCG NGMGELVKYE EDFESFLLED
201: SASYYSRNAS RWNQENSCPD YMIKAEESLR LEKERVTNYL HSTTEPKLVA KVQNELLVVV AKQLIENEHS GCRALLRDDK MDDLARMYRL YHPIPQGLDP
301: VADLFKQHIT VEGSALIKQA TEAATDKAAS TSGLKVQDQV LIRQLIDLHD KFMVYVDECF QKHSLFHKAL KEAFEVFCNK TVAGVSSAEI LATYCDNILK
401: TGGGIEKLEN EDLELTLEKV VKLLVYISDK DLFAEFFRKK QARRLLFDRN GNDYHERSLL TKFKELLGAQ FTSKMEGMLT DMTLAKEHQT NFVEFLSVNK
501: TKKLGMDFTV TVLTTGFWPS YKTTDLNLPI EMVNCVEAFK AYYGTKTNSR RLSWIYSLGT CQLAGKFDKK TIEIVVTTYQ AAVLLLFNNT ERLSYTEILE
601: QLNLGHEDLA RLLHSLSCLK YKILIKEPMS RNISNTDTFE FNSKFTDKMR RIRVPLPPMD ERKKIVEDVD KDRRYAIDAA LVRIMKSRKV LGHQQLVSEC
701: VEHLSKMFKP DIKMIKKRIE DLISRDYLER DTDNPNTFKY LA
Arabidopsis Description
CUL2Cullin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRZ0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.