Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G285800.1 | Wheat | cytosol | 99.73 | 99.73 |
| TraesCS6B01G335200.1 | Wheat | cytosol | 99.59 | 99.59 |
| HORVU6Hr1G075720.2 | Barley | cytosol | 98.1 | 96.78 |
| EES05529 | Sorghum | cytosol | 94.43 | 94.43 |
| Os02t0746000-01 | Rice | cytosol | 94.02 | 94.02 |
| Zm00001d018043_P001 | Maize | cytosol | 93.48 | 93.48 |
| GSMUA_Achr7P18000_001 | Banana | cytosol | 81.66 | 84.89 |
| GSMUA_Achr8P16990_001 | Banana | cytosol | 81.52 | 84.75 |
| GSMUA_AchrUn_... | Banana | cytosol | 80.98 | 84.18 |
| VIT_01s0026g02230.t01 | Wine grape | cytosol | 82.2 | 82.54 |
| PGSC0003DMT400003338 | Potato | cytosol | 81.25 | 81.58 |
| Solyc02g087900.2.1 | Tomato | cytosol | 81.25 | 81.58 |
| Solyc01g010820.2.1 | Tomato | cytosol | 81.25 | 81.47 |
| PGSC0003DMT400016765 | Potato | cytosol | 80.84 | 81.06 |
| KRG93520 | Soybean | cytosol | 79.76 | 80.08 |
| KRH18483 | Soybean | cytosol | 79.62 | 79.95 |
| KRH45896 | Soybean | cytosol | 78.94 | 79.37 |
| KRG99095 | Soybean | cytosol | 78.67 | 79.1 |
| AT1G26830.1 | Thale cress | cytosol | 78.4 | 78.83 |
| AT1G69670.1 | Thale cress | cytosol | 78.26 | 78.69 |
| CDY16196 | Canola | cytosol | 77.58 | 78.01 |
| VIT_14s0108g00490.t01 | Wine grape | cytosol | 83.02 | 77.93 |
| CDY50732 | Canola | cytosol | 77.45 | 77.87 |
| CDY46437 | Canola | cytosol | 77.45 | 77.87 |
| TraesCS2A01G520700.1 | Wheat | cytosol | 77.45 | 77.87 |
| CDY45004 | Canola | cytosol | 77.45 | 77.87 |
| Bra016291.1-P | Field mustard | cytosol | 77.45 | 77.87 |
| Bra024680.1-P | Field mustard | cytosol | 77.31 | 77.73 |
| KRH70713 | Soybean | cytosol | 69.84 | 70.7 |
| TraesCS5A01G425300.1 | Wheat | cytosol | 40.08 | 41.49 |
| TraesCS1A01G090000.1 | Wheat | cytosol | 35.05 | 34.68 |
| TraesCS1A01G089900.1 | Wheat | cytosol, golgi | 35.05 | 34.58 |
| TraesCS3A01G039000.1 | Wheat | cytosol | 32.34 | 33.43 |
| TraesCS3A01G457400.1 | Wheat | cytosol | 8.56 | 21.0 |
Protein Annotations
| Gene3D:1.10.10.10 | Gene3D:1.10.10.2620 | Gene3D:1.20.1310.10 | MapMan:19.2.2.8.2.1 | ncoils:Coil | InterPro:Cullin_N |
| InterPro:Cullin_homology | InterPro:Cullin_homology_sf | InterPro:Cullin_neddylation_domain | InterPro:Cullin_repeat-like_dom_sf | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 |
| GO:GO:0019538 | GO:GO:0031625 | InterPro:IPR016158 | InterPro:IPR036388 | PFAM:PF00888 | PFAM:PF10557 |
| PFscan:PS50069 | PANTHER:PTHR11932 | PANTHER:PTHR11932:SF74 | SMART:SM00182 | SMART:SM00884 | SUPFAM:SSF46785 |
| SUPFAM:SSF74788 | SUPFAM:SSF75632 | EnsemblPlantsGene:TraesCS6A01G306600 | EnsemblPlants:TraesCS6A01G306600.1 | InterPro:WH-like_DNA-bd_sf | InterPro:WH_DNA-bd_sf |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr6A:+:540601553..540604680
Molecular Weight (calculated)
85469.0 Da
IEP (calculated)
7.365
GRAVY (calculated)
-0.546
Length
736 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGGGPPRKR NFKIEMFKHR VELDPKYAER TWKVLEHAIH EIYNHNASGL SFEELYRSAY NMVLHKYGEK LYNGLESTMT WRLKEISKSI EAAQGGLFLE
101: ELNAKWMDHN KALQMIRDIL MYMDRTYVPT SHRTPVHELG LNLWRDHIIH YPMIHGRLLD TLLDLIHRER MGEVINRGLM RSITKMLMDL GPAVYQDDFE
201: KPFLEVSASF YSGESQEFIE CCDCGNYLKK AERRLNEEME RVSHYLDAGS EAKITSVVEK EMIANHMHRL VHMENSGLVN MLIDDKYEDL GRMYALFRRV
301: PDGLSTIRDM MTSYLRETGK HLVTDPERLK DPVEFVQCLL NEKDKHDKII NVAFGNDKTF QNALNSSFEF FINLNNRSPE FISLYVDDKL RKGLKGATEE
401: DVEGILDKVM MLFRYLQEKD VFEKYYKQHL AKRLLSGKTV SDDAERSMIV KLKTECGYQF TSKLEGMFTD MKTSQDTMQD FYAKKSEELG DGPTLDVHIL
501: TTGSWPTQPS PPCSLPPEIL AVCEKFRGYY LGTHSGRRLT WQTNMGTADI KATFGKSQKH ELNVSTYQMC VLMLFNTSDG LSYKDIEQAT EIPSTDLKRC
601: LQSLACVKGK NVLRKEPMSK DISEDDTFYF NDKFTSKLVK VKIGTVVAAK ESEPEKQETR QRVEEDRKPQ IEAAIVRIMK SRRVLDHNSI VSEVTKQLQA
701: RFLPNPVIIK KRIESLIERE FLERDKADRK LYRYLA
101: ELNAKWMDHN KALQMIRDIL MYMDRTYVPT SHRTPVHELG LNLWRDHIIH YPMIHGRLLD TLLDLIHRER MGEVINRGLM RSITKMLMDL GPAVYQDDFE
201: KPFLEVSASF YSGESQEFIE CCDCGNYLKK AERRLNEEME RVSHYLDAGS EAKITSVVEK EMIANHMHRL VHMENSGLVN MLIDDKYEDL GRMYALFRRV
301: PDGLSTIRDM MTSYLRETGK HLVTDPERLK DPVEFVQCLL NEKDKHDKII NVAFGNDKTF QNALNSSFEF FINLNNRSPE FISLYVDDKL RKGLKGATEE
401: DVEGILDKVM MLFRYLQEKD VFEKYYKQHL AKRLLSGKTV SDDAERSMIV KLKTECGYQF TSKLEGMFTD MKTSQDTMQD FYAKKSEELG DGPTLDVHIL
501: TTGSWPTQPS PPCSLPPEIL AVCEKFRGYY LGTHSGRRLT WQTNMGTADI KATFGKSQKH ELNVSTYQMC VLMLFNTSDG LSYKDIEQAT EIPSTDLKRC
601: LQSLACVKGK NVLRKEPMSK DISEDDTFYF NDKFTSKLVK VKIGTVVAAK ESEPEKQETR QRVEEDRKPQ IEAAIVRIMK SRRVLDHNSI VSEVTKQLQA
701: RFLPNPVIIK KRIESLIERE FLERDKADRK LYRYLA
001: MSNQKKRNFQ IEAFKHRVVV DPKYADKTWQ ILERAIHQIY NQDASGLSFE ELYRNAYNMV LHKFGEKLYT GFIATMTSHL KEKSKLIEAA QGGSFLEELN
101: KKWNEHNKAL EMIRDILMYM DRTYIESTKK THVHPMGLNL WRDNVVHFTK IHTRLLNTLL DLVQKERIGE VIDRGLMRNV IKMFMDLGES VYQEDFEKPF
201: LDASSEFYKV ESQEFIESCD CGDYLKKSEK RLTEEIERVA HYLDAKSEEK ITSVVEKEMI ANHMQRLVHM ENSGLVNMLL NDKYEDLGRM YNLFRRVTNG
301: LVTVRDVMTS HLREMGKQLV TDPEKSKDPV EFVQRLLDER DKYDKIINTA FGNDKTFQNA LNSSFEYFIN LNARSPEFIS LFVDDKLRKG LKGITDVDVE
401: VILDKVMMLF RYLQEKDVFE KYYKQHLAKR LLSGKTVSDD AERSLIVKLK TECGYQFTSK LEGMFTDMKT SEDTMRGFYG SHPELSEGPT LIVQVLTTGS
501: WPTQPAVPCN LPAEVSVLCE KFRSYYLGTH TGRRLSWQTN MGTADIKAIF GKGQKHELNV STFQMCVLML FNNSDRLSYK EIEQATEIPA ADLKRCLQSL
601: ACVKGKNVIK KEPMSKDIGE EDLFVVNDKF TSKFYKVKIG TVVAQKETEP EKQETRQRVE EDRKPQIEAA IVRIMKSRKI LDHNNIIAEV TKQLQPRFLA
701: NPTEIKKRIE SLIERDFLER DSTDRKLYRY LA
101: KKWNEHNKAL EMIRDILMYM DRTYIESTKK THVHPMGLNL WRDNVVHFTK IHTRLLNTLL DLVQKERIGE VIDRGLMRNV IKMFMDLGES VYQEDFEKPF
201: LDASSEFYKV ESQEFIESCD CGDYLKKSEK RLTEEIERVA HYLDAKSEEK ITSVVEKEMI ANHMQRLVHM ENSGLVNMLL NDKYEDLGRM YNLFRRVTNG
301: LVTVRDVMTS HLREMGKQLV TDPEKSKDPV EFVQRLLDER DKYDKIINTA FGNDKTFQNA LNSSFEYFIN LNARSPEFIS LFVDDKLRKG LKGITDVDVE
401: VILDKVMMLF RYLQEKDVFE KYYKQHLAKR LLSGKTVSDD AERSLIVKLK TECGYQFTSK LEGMFTDMKT SEDTMRGFYG SHPELSEGPT LIVQVLTTGS
501: WPTQPAVPCN LPAEVSVLCE KFRSYYLGTH TGRRLSWQTN MGTADIKAIF GKGQKHELNV STFQMCVLML FNNSDRLSYK EIEQATEIPA ADLKRCLQSL
601: ACVKGKNVIK KEPMSKDIGE EDLFVVNDKF TSKFYKVKIG TVVAQKETEP EKQETRQRVE EDRKPQIEAA IVRIMKSRKI LDHNNIIAEV TKQLQPRFLA
701: NPTEIKKRIE SLIERDFLER DSTDRKLYRY LA
Arabidopsis Description
CUL3ACUL3A [Source:UniProtKB/TrEMBL;Acc:A0A178WM88]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.