Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G359400.1 | Wheat | cytosol | 96.24 | 96.24 |
| HORVU2Hr1G083410.1 | Barley | cytosol | 20.81 | 90.0 |
| TraesCS2D01G339700.1 | Wheat | cytosol | 96.53 | 88.13 |
| TraesCS2A01G323000.1 | Wheat | cytosol | 82.66 | 84.37 |
| Zm00001d025707_P001 | Maize | cytosol | 68.79 | 69.79 |
| Os04t0482300-01 | Rice | cytosol | 69.94 | 68.17 |
| EES11006 | Sorghum | cytosol, endoplasmic reticulum, nucleus | 70.81 | 67.68 |
| GSMUA_Achr9P02050_001 | Banana | cytosol | 50.58 | 51.32 |
| GSMUA_AchrUn_... | Banana | cytosol, mitochondrion, nucleus | 52.31 | 51.27 |
| GSMUA_Achr6P12110_001 | Banana | nucleus | 48.55 | 48.55 |
| PGSC0003DMT400069397 | Potato | nucleus | 40.75 | 42.34 |
| TraesCS3A01G413600.1 | Wheat | cytosol, plastid | 41.62 | 41.38 |
| KRH03892 | Soybean | cytosol | 41.33 | 41.33 |
| KRH37914 | Soybean | cytosol | 11.85 | 41.0 |
| TraesCS3A01G413700.1 | Wheat | cytosol, plastid | 40.75 | 40.17 |
| Solyc06g071820.2.1 | Tomato | nucleus | 40.46 | 40.11 |
| KRH63672 | Soybean | nucleus | 37.86 | 40.06 |
| KRH57174 | Soybean | cytosol | 25.43 | 39.82 |
| PGSC0003DMT400039384 | Potato | nucleus | 39.6 | 39.71 |
| Solyc03g111710.2.1 | Tomato | nucleus | 39.6 | 39.71 |
| VIT_17s0000g09790.t01 | Wine grape | cytosol | 39.31 | 39.19 |
| AT3G48360.1 | Thale cress | nucleus | 39.6 | 37.64 |
| CDY41504 | Canola | nucleus | 35.84 | 37.35 |
| AT5G63160.1 | Thale cress | nucleus | 38.73 | 36.71 |
| PGSC0003DMT400069392 | Potato | nucleus | 36.99 | 36.68 |
| Bra038612.1-P | Field mustard | nucleus | 38.44 | 36.64 |
| Solyc06g071830.2.1 | Tomato | nucleus | 35.26 | 36.64 |
| CDX84392 | Canola | nucleus | 37.86 | 36.19 |
| CDY48173 | Canola | nucleus | 37.57 | 35.81 |
| Bra029235.1-P | Field mustard | nucleus | 37.86 | 35.6 |
| CDY70710 | Canola | nucleus | 15.9 | 35.03 |
| Bra018065.1-P | Field mustard | nucleus | 37.86 | 34.66 |
| CDY39576 | Canola | nucleus | 35.55 | 33.52 |
| CDY30743 | Canola | nucleus | 37.86 | 33.0 |
| CDY45741 | Canola | nucleus | 37.28 | 32.49 |
| TraesCS3A01G400400.1 | Wheat | cytosol | 33.53 | 29.29 |
Protein Annotations
| Gene3D:1.20.1020.10 | MapMan:15.5.31 | MapMan:19.2.2.8.2.2.4 | Gene3D:3.30.710.10 | InterPro:BTB/POZ_dom | GO:GO:0003674 |
| GO:GO:0003712 | GO:GO:0003824 | GO:GO:0004402 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0006464 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016043 |
| GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR000197 | InterPro:IPR000210 | InterPro:IPR035898 | PFAM:PF00651 |
| PFAM:PF02135 | PFscan:PS50097 | PANTHER:PTHR24413 | PANTHER:PTHR24413:SF211 | InterPro:SKP1/BTB/POZ_sf | SMART:SM00225 |
| SMART:SM00551 | SUPFAM:SSF54695 | SUPFAM:SSF57933 | InterPro:TAZ_dom_sf | EnsemblPlantsGene:TraesCS2A01G323200 | EnsemblPlants:TraesCS2A01G323200.1 |
| InterPro:Znf_TAZ | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr2A:-:553278363..553280167
Molecular Weight (calculated)
38262.5 Da
IEP (calculated)
9.819
GRAVY (calculated)
-0.172
Length
346 amino acids
Sequence
(BLAST)
(BLAST)
001: MTICAGVDSY RASPADMRVV TSDGQSIAAH SYILASASPV LERMIDRAQR GWGAECTIPV LGVSFDAVHA FIHFLYSSKS KVVPAEEEAV GANWTQLLAL
101: AHAYRVGWLK RAAEAAVSAR LTPERAVDML KLARLCDAPR LYMRCARLAA KEFAAVEQSD GWRFARRHDA ALELELLTLL EDADQRNERW ARERAAQEAC
201: RQLGQAMASL EHIFPGESGA KAACADADAP CARAGCTCRG LQVLMRHFAT CARKMAPGGC ARCKRMLQLF RLHASVCDRP DRACRVPLCS HFKAKSQMGK
301: ADKTWRLLVK KVTRAKVMSS MAERKVVPEV VAESWARYNR RGAKLR
101: AHAYRVGWLK RAAEAAVSAR LTPERAVDML KLARLCDAPR LYMRCARLAA KEFAAVEQSD GWRFARRHDA ALELELLTLL EDADQRNERW ARERAAQEAC
201: RQLGQAMASL EHIFPGESGA KAACADADAP CARAGCTCRG LQVLMRHFAT CARKMAPGGC ARCKRMLQLF RLHASVCDRP DRACRVPLCS HFKAKSQMGK
301: ADKTWRLLVK KVTRAKVMSS MAERKVVPEV VAESWARYNR RGAKLR
001: MEAVLVAMSV PATTEDDGFS LITDKLSYNL TPTSDVEIVT SDNRRIPAHS GVLASASPVL MNIMKKPMRR YRGCGSKRVI KILGVPCDAV SVFIKFLYSS
101: SLTEDEMERY GIHLLALSHV YMVTQLKQRC SKGVVQRLTT ENVVDVLQLA RLCDAPDVCL RSMRLIHSQF KTVEQTEGWK FIQEHDPFLE LDILQFIDDA
201: ESRKKRRRRH RKEQDLYMQL SEAMECIEHI CTQGCTLVGP SNVVDNNKKS MTAEKSEPCK AFSTCYGLQL LIRHFAVCKR RNNDKGCLRC KRMLQLFRLH
301: SLICDQPDSC RVPLCRQFRK RGEQDKKMGE DTKWKLLVTR VVSAKAMTSL CQSKKNKCEQ AQGV
101: SLTEDEMERY GIHLLALSHV YMVTQLKQRC SKGVVQRLTT ENVVDVLQLA RLCDAPDVCL RSMRLIHSQF KTVEQTEGWK FIQEHDPFLE LDILQFIDDA
201: ESRKKRRRRH RKEQDLYMQL SEAMECIEHI CTQGCTLVGP SNVVDNNKKS MTAEKSEPCK AFSTCYGLQL LIRHFAVCKR RNNDKGCLRC KRMLQLFRLH
301: SLICDQPDSC RVPLCRQFRK RGEQDKKMGE DTKWKLLVTR VVSAKAMTSL CQSKKNKCEQ AQGV
Arabidopsis Description
BT2BTB/POZ and TAZ domain-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q94BN0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.