CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, nucleus, cytosol

Predictor Summary:

nucleus 2
mitochondrion 1
endoplasmic reticulum 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, nucleus
Any Predictor:	cytosol, endoplasmic reticulum, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
EES05529
EES07108
EES09373
EES16732
KXG24325

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G48360.1	EES05529	AT1G26830.1	15772280
AT3G48360.1	EES09373	AT1G35670.1	19130088
AT3G48360.1	EES16732	AT1G35670.1	19130088
AT3G48360.1	EES07108	AT3G01770.1	15316289
AT3G48360.1	KXG24325	AT3G01770.1	15316289
AT3G48360.1	EES09373	AT4G09570.1	19130088
AT3G48360.1	EES16732	AT4G09570.1	19130088
AT5G63160.1	EES05529	AT1G26830.1	15772280
AT5G63160.1	EES07108	AT3G01770.1	15316289
AT5G63160.1	KXG24325	AT3G01770.1	15316289

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d025707_P001	Maize	cytosol	81.49	86.51
TraesCS2D01G339900.1	Wheat	cytosol	71.55	76.4
TraesCS2A01G323000.1	Wheat	cytosol	70.72	75.52
TraesCS2B01G359600.1	Wheat	cytosol	70.44	75.22
HORVU2Hr1G083410.1	Barley	cytosol	15.75	71.25
TraesCS2B01G359400.1	Wheat	cytosol	67.96	71.1
TraesCS2A01G323200.1	Wheat	cytosol	67.68	70.81
Os04t0482300-01	Rice	cytosol	67.68	69.01
TraesCS2D01G339700.1	Wheat	cytosol	67.68	64.64
EES05370	Sorghum	plastid	57.46	58.43
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, nucleus	51.66	52.97
GSMUA_Achr9P02050_001	Banana	cytosol	49.72	52.79
GSMUA_Achr6P12110_001	Banana	nucleus	47.79	50.0
HORVU2Hr1G083430.3	Barley	nucleus	23.48	48.57
HORVU2Hr1G083490.1	Barley	extracellular	11.05	45.98
EES01931	Sorghum	cytosol	40.88	42.41
PGSC0003DMT400069397	Potato	nucleus	38.95	42.34
KRH03892	Soybean	cytosol	38.95	40.75
VIT_17s0000g09790.t01	Wine grape	cytosol	38.95	40.63
PGSC0003DMT400039384	Potato	nucleus	38.12	40.0
Solyc03g111710.2.1	Tomato	nucleus	38.12	40.0
Solyc06g071820.2.1	Tomato	nucleus	38.4	39.83
KRH57174	Soybean	cytosol	24.31	39.82
Solyc06g071830.2.1	Tomato	nucleus	35.91	39.04
PGSC0003DMT400069392	Potato	nucleus	37.57	38.97
KRH63672	Soybean	nucleus	34.81	38.53
AT3G48360.1	Thale cress	nucleus	38.12	37.91
CDY41504	Canola	nucleus	34.53	37.65
KRH37914	Soybean	cytosol	10.22	37.0
Bra038612.1-P	Field mustard	nucleus	36.74	36.64
Bra029235.1-P	Field mustard	nucleus	36.74	36.14
CDY48173	Canola	nucleus	35.91	35.81
AT5G63160.1	Thale cress	nucleus	35.64	35.34
CDX84392	Canola	nucleus	35.08	35.08
Bra018065.1-P	Field mustard	nucleus	36.19	34.66
CDY39576	Canola	nucleus	34.53	34.06
CDY30743	Canola	nucleus	36.74	33.5
CDY45741	Canola	nucleus	35.91	32.75
CDY70710	Canola	nucleus	13.54	31.21
OQU88021	Sorghum	nucleus	33.98	28.94

Protein Annotations

Gene3D:1.20.1020.10	Gene3D:1.25.40.420	MapMan:15.5.31	MapMan:19.2.2.8.2.2.4	Gene3D:3.30.710.10	InterPro:BTB/POZ_dom
UniProt:C5YAU2	EnsemblPlants:EES11006	ProteinID:EES11006	ProteinID:EES11006.2	GO:GO:0003674	GO:GO:0003712
GO:GO:0003824	GO:GO:0004402	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0006464	GO:GO:0008150
GO:GO:0008152	GO:GO:0008270	GO:GO:0009058	GO:GO:0009987	GO:GO:0016043	GO:GO:0016573
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000197	InterPro:IPR000210	InterPro:IPR035898	PFAM:PF00651
PFAM:PF02135	PFscan:PS50097	PANTHER:PTHR24413	PANTHER:PTHR24413:SF211	InterPro:SKP1/BTB/POZ_sf	SMART:SM00551
EnsemblPlantsGene:SORBI_3006G124000	SUPFAM:SSF54695	SUPFAM:SSF57933	InterPro:TAZ_dom_sf	UniParc:UPI00081ADE75	InterPro:Znf_TAZ
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:48958495..48960747

Molecular Weight (calculated)

39399.4 Da

IEP (calculated)

9.530

GRAVY (calculated)

-0.103

Length

362 amino acids

Sequence
(BLAST)

001: MALLYADLDA LRASAADVRI VTSDGQTIAA HSYVLASASP VLERMIDRAR CRGWGAAADC TIAVLGVPSD AVLAFLHLLY SSDAAALARS RRLVAPGAED
101: LVAAHGPQLL ALAHAYRVGW LKRAAEAAVS ARWLTADRAV DMLKLARLCD APRLYARCAR LAAKDFAAVE ASDGWRFARR HDPALELELL QLLEDADTRR
201: ARWARARASQ EAYRQLGHAM GSLDRIFAAA GGGTDDDASS AGTCQDGDDA TCQGLRLLMR HFATCARKVA PGGCARCKRM LQLFRLHASV CDRPEQDQPC
301: RVPLCSHFTA KMQTEKADKT WRLLVKKVTR ARAMAGLANR QVPEVVAMSW AKYSTSSKWA RN

Best Arabidopsis Sequence Match ( AT3G48360.1 )
(BLAST)

001: MEAVLVAMSV PATTEDDGFS LITDKLSYNL TPTSDVEIVT SDNRRIPAHS GVLASASPVL MNIMKKPMRR YRGCGSKRVI KILGVPCDAV SVFIKFLYSS
101: SLTEDEMERY GIHLLALSHV YMVTQLKQRC SKGVVQRLTT ENVVDVLQLA RLCDAPDVCL RSMRLIHSQF KTVEQTEGWK FIQEHDPFLE LDILQFIDDA
201: ESRKKRRRRH RKEQDLYMQL SEAMECIEHI CTQGCTLVGP SNVVDNNKKS MTAEKSEPCK AFSTCYGLQL LIRHFAVCKR RNNDKGCLRC KRMLQLFRLH
301: SLICDQPDSC RVPLCRQFRK RGEQDKKMGE DTKWKLLVTR VVSAKAMTSL CQSKKNKCEQ AQGV

Arabidopsis Description

BT2BTB/POZ and TAZ domain-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q94BN0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.