CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
plasma membrane 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EES05529
EES07108
EES09373
EES16732
KXG24325

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G48360.1	EES05529	AT1G26830.1	15772280
AT3G48360.1	EES09373	AT1G35670.1	19130088
AT3G48360.1	EES16732	AT1G35670.1	19130088
AT3G48360.1	EES07108	AT3G01770.1	15316289
AT3G48360.1	KXG24325	AT3G01770.1	15316289
AT3G48360.1	EES09373	AT4G09570.1	19130088
AT3G48360.1	EES16732	AT4G09570.1	19130088
AT5G63160.1	EES05529	AT1G26830.1	15772280
AT5G63160.1	EES07108	AT3G01770.1	15316289
AT5G63160.1	KXG24325	AT3G01770.1	15316289

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d042443_P001	Maize	cytosol	87.39	88.66
Os01t0908200-01	Rice	cytosol	72.21	72.62
TraesCS3D01G408100.1	Wheat	cytosol, plastid	67.91	67.91
TraesCS3B01G448100.1	Wheat	plastid	68.48	67.9
TraesCS3B01G448000.1	Wheat	cytosol, plastid	67.05	67.63
TraesCS3A01G413600.1	Wheat	cytosol, plastid	67.05	67.24
TraesCS3A01G413700.1	Wheat	cytosol, plastid	67.34	66.95
HORVU3Hr1G092090.3	Barley	mitochondrion, nucleus	36.96	65.48
TraesCS3D01G408000.1	Wheat	plastid	65.33	64.59
GSMUA_Achr11P...	Banana	nucleus	52.72	51.83
GSMUA_AchrUn_...	Banana	nucleus	49.86	50.58
KRH57174	Soybean	cytosol	29.51	46.61
KRH63672	Soybean	nucleus	43.55	46.48
PGSC0003DMT400069397	Potato	nucleus	43.27	45.35
PGSC0003DMT400069392	Potato	nucleus	44.7	44.7
VIT_17s0000g09790.t01	Wine grape	cytosol	44.41	44.67
PGSC0003DMT400039384	Potato	nucleus	44.13	44.64
Solyc06g071830.2.1	Tomato	nucleus	42.41	44.44
KRH03892	Soybean	cytosol	43.84	44.22
Solyc03g111710.2.1	Tomato	nucleus	43.55	44.06
CDY41504	Canola	nucleus	41.55	43.67
GSMUA_Achr6P12420_001	Banana	nucleus	46.42	43.55
Solyc06g071820.2.1	Tomato	nucleus	42.98	42.98
KRH37914	Soybean	cytosol	12.03	42.0
Bra029235.1-P	Field mustard	nucleus	43.84	41.58
CDX84392	Canola	nucleus	42.98	41.44
Bra038612.1-P	Field mustard	nucleus	42.69	41.05
EES11006	Sorghum	cytosol, endoplasmic reticulum, nucleus	42.41	40.88
AT5G63160.1	Thale cress	nucleus	42.41	40.55
CDY48173	Canola	nucleus	41.83	40.22
CDY70710	Canola	nucleus	18.05	40.13
AT3G48360.1	Thale cress	nucleus	41.83	40.11
EES05370	Sorghum	plastid	40.69	39.89
CDY30743	Canola	nucleus	44.41	39.04
CDY39576	Canola	nucleus	40.69	38.69
CDY45741	Canola	nucleus	43.84	38.54
Bra018065.1-P	Field mustard	nucleus	41.26	38.1
OQU88021	Sorghum	nucleus	35.53	29.18

Protein Annotations

Gene3D:1.20.1020.10	Gene3D:1.25.40.420	MapMan:15.5.31	MapMan:19.2.2.8.2.2.4	Gene3D:3.30.710.10	EntrezGene:8056140
InterPro:BTB/POZ_dom	UniProt:C5XFI9	EnsemblPlants:EES01931	ProteinID:EES01931	ProteinID:EES01931.1	GO:GO:0003674
GO:GO:0003712	GO:GO:0003824	GO:GO:0004402	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006139	GO:GO:0006355
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009056	GO:GO:0009058
GO:GO:0009987	GO:GO:0016043	GO:GO:0016573	GO:GO:0016740	GO:GO:0019005	GO:GO:0019538
GO:GO:0030162	GO:GO:0031625	GO:GO:0042787	GO:GO:0043161	InterPro:IPR000197	InterPro:IPR000210
InterPro:IPR035898	PFAM:PF00651	PFAM:PF02135	PFscan:PS50097	PANTHER:PTHR24413	PANTHER:PTHR24413:SF75
InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SMART:SM00551	EnsemblPlantsGene:SORBI_3003G395400	InterPro:SPOP_C	SUPFAM:SSF54695
SUPFAM:SSF57933	unigene:Sbi.11006	InterPro:TAZ_dom_sf	UniParc:UPI0001A85104	RefSeq:XP_002456811.1	InterPro:Znf_TAZ
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:70592116..70595994

Molecular Weight (calculated)

39110.0 Da

IEP (calculated)

8.771

GRAVY (calculated)

-0.465

Length

349 amino acids

Sequence
(BLAST)

001: MCEAPRLGYR AAGAGDADAA DVDVVTTGGR RRIPAHSSVL ASASPVLGSI LERRLQKDRE SGKPGRSVVR IRGVTDDAAA AFVRLLYAGR CGDGGEEEEE
101: DDAMEKHAVQ VLVLAHAYQV PWLKRACEGA IGARLTADSV VDVLQLADLC DAPRLHLRCT RLLAKEFAAV ERTEAWRFLQ ENDPWQELHV LQRLHEADMR
201: RRKWRRKRAE QRVYVELSEA MDCLDHICTE GCTEVGPARR APAPAPCARY ATCRGLQLLI RHFSQCHRKS CARCQRMWQL LRLHSALCDR PDRCNTPLCM
301: RFKQKEQEKV AAKAGDDDDK WGLLVKKVKA ARVFSSLANR KQTSTSTQC

Best Arabidopsis Sequence Match ( AT5G63160.1 )
(BLAST)

001: MAITATQNDG VSLNANKISY DLVETDVEII TSGRRSIPAH SGILASVSPV LTNIIEKPRK IHGGSSKKVI KILGVPCDAV SVFVRFLYSP SVTENEMEKY
101: GIHLLALSHV YMVTQLKQRC TKGVGERVTA ENVVDILQLA RLCDAPDLCL KCMRFIHYKF KTVEQTEGWK FLQEHDPFLE LDILQFIDDA ESRKKRRRRH
201: RREQNLYLQL SEAMECIEHI CTEGCTLVGP SSNLDNKSTC QAKPGPCSAF STCYGLQLLI RHFAVCKKRV DGKGCVRCKR MIQLLRLHSS ICDQSESCRV
301: PLCRQYKNRG EKDKKMVEDT KWKVLVRRVA SAKAMSSLSQ SKKKKSEVLF KEEAEDLIRI RNKLM

Arabidopsis Description

BT1BTB/POZ and TAZ domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FMK7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.