Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G63160.1 | CDY16196 | AT1G26830.1 | 15772280 |
| AT5G63160.1 | CDY45004 | AT1G26830.1 | 15772280 |
| AT5G63160.1 | CDY46437 | AT1G26830.1 | 15772280 |
| AT5G63160.1 | CDY50732 | AT1G26830.1 | 15772280 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY70710 | Canola | nucleus | 41.99 | 96.82 |
| Bra038612.1-P | Field mustard | nucleus | 96.41 | 96.14 |
| CDY41504 | Canola | nucleus | 87.85 | 95.78 |
| AT5G63160.1 | Thale cress | nucleus | 88.12 | 87.4 |
| CDY30743 | Canola | nucleus | 88.95 | 81.11 |
| CDY45741 | Canola | nucleus | 87.85 | 80.1 |
| CDY48173 | Canola | nucleus | 69.06 | 68.87 |
| CDY39576 | Canola | nucleus | 66.3 | 65.4 |
| PGSC0003DMT400069397 | Potato | nucleus | 56.35 | 61.26 |
| VIT_17s0000g09790.t01 | Wine grape | cytosol | 57.46 | 59.94 |
| Solyc06g071820.2.1 | Tomato | nucleus | 56.91 | 59.03 |
| KRH57174 | Soybean | cytosol | 35.64 | 58.37 |
| PGSC0003DMT400039384 | Potato | nucleus | 55.52 | 58.26 |
| Solyc03g111710.2.1 | Tomato | nucleus | 54.97 | 57.68 |
| Solyc06g071830.2.1 | Tomato | nucleus | 52.21 | 56.76 |
| PGSC0003DMT400069392 | Potato | nucleus | 54.14 | 56.16 |
| KRH63672 | Soybean | nucleus | 49.17 | 54.43 |
| KRH03892 | Soybean | cytosol | 51.93 | 54.34 |
| GSMUA_Achr11P... | Banana | nucleus | 47.79 | 48.73 |
| KRH37914 | Soybean | cytosol | 13.26 | 48.0 |
| GSMUA_AchrUn_... | Banana | nucleus | 45.3 | 47.67 |
| GSMUA_AchrUn_... | Banana | cytosol, mitochondrion, nucleus | 45.03 | 46.18 |
| Os01t0908200-01 | Rice | cytosol | 43.37 | 45.24 |
| Zm00001d042443_P001 | Maize | cytosol | 41.99 | 44.19 |
| HORVU3Hr1G092090.3 | Barley | mitochondrion, nucleus | 23.48 | 43.15 |
| GSMUA_Achr9P02050_001 | Banana | cytosol | 40.61 | 43.11 |
| EES01931 | Sorghum | cytosol | 41.44 | 42.98 |
| GSMUA_Achr6P12110_001 | Banana | nucleus | 40.06 | 41.91 |
| TraesCS3D01G408100.1 | Wheat | cytosol, plastid | 40.06 | 41.55 |
| TraesCS3A01G413600.1 | Wheat | cytosol, plastid | 39.23 | 40.8 |
| TraesCS3B01G448000.1 | Wheat | cytosol, plastid | 38.95 | 40.75 |
| TraesCS3B01G448100.1 | Wheat | plastid | 39.5 | 40.62 |
| TraesCS3D01G408000.1 | Wheat | plastid | 39.5 | 40.51 |
| GSMUA_Achr6P12420_001 | Banana | nucleus | 41.44 | 40.32 |
| TraesCS2A01G323000.1 | Wheat | cytosol | 37.57 | 40.12 |
| TraesCS2B01G359600.1 | Wheat | cytosol | 37.02 | 39.53 |
| TraesCS2D01G339900.1 | Wheat | cytosol | 36.74 | 39.23 |
| TraesCS3A01G413700.1 | Wheat | cytosol, plastid | 37.85 | 39.03 |
| TraesCS2B01G359400.1 | Wheat | cytosol | 37.02 | 38.73 |
| TraesCS2A01G323200.1 | Wheat | cytosol | 36.19 | 37.86 |
| Zm00001d025707_P001 | Maize | cytosol | 35.36 | 37.54 |
| HORVU2Hr1G083410.1 | Barley | cytosol | 8.29 | 37.5 |
| Os04t0482300-01 | Rice | cytosol | 35.91 | 36.62 |
| TraesCS2D01G339700.1 | Wheat | cytosol | 37.57 | 35.88 |
| EES05370 | Sorghum | plastid | 34.53 | 35.11 |
| EES11006 | Sorghum | cytosol, endoplasmic reticulum, nucleus | 35.08 | 35.08 |
| CDY29568 | Canola | nucleus | 35.64 | 34.04 |
| Zm00001d017101_P001 | Maize | plastid | 34.53 | 33.88 |
| CDY50978 | Canola | nucleus, plastid | 34.81 | 33.69 |
| CDX72641 | Canola | nucleus, plastid | 35.36 | 33.68 |
| CDX75666 | Canola | nucleus | 34.53 | 33.42 |
| CDY36495 | Canola | cytosol | 35.08 | 33.42 |
| CDY08721 | Canola | cytosol | 34.81 | 33.16 |
| CDY10140 | Canola | plastid | 32.32 | 31.88 |
| CDX86561 | Canola | nucleus | 35.64 | 30.79 |
| CDY15554 | Canola | nucleus | 34.53 | 29.48 |
| HORVU2Hr1G083430.3 | Barley | nucleus | 12.71 | 26.29 |
| HORVU2Hr1G083490.1 | Barley | extracellular | 4.42 | 18.39 |
| Os02t0596700-00 | Rice | plastid | 14.92 | 18.12 |
Protein Annotations
| Gene3D:1.20.1020.10 | Gene3D:1.25.40.420 | MapMan:15.5.31 | MapMan:19.2.2.8.2.2.4 | Gene3D:3.30.710.10 | GO:A0A078D5F1 |
| InterPro:BTB/POZ_dom | EnsemblPlants:CDX84392 | ProteinID:CDX84392 | ProteinID:CDX84392.1 | GO:GO:0003674 | GO:GO:0003712 |
| GO:GO:0003824 | GO:GO:0004402 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0006464 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008270 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016740 |
| GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00141561001 | InterPro:IPR000197 | InterPro:IPR000210 | InterPro:IPR035898 | PFAM:PF00651 |
| PFAM:PF02135 | PFscan:PS50097 | PANTHER:PTHR24413 | PANTHER:PTHR24413:SF75 | InterPro:SKP1/BTB/POZ_sf | SMART:SM00225 |
| SMART:SM00551 | InterPro:SPOP_C | SUPFAM:SSF54695 | SUPFAM:SSF57933 | InterPro:TAZ_dom_sf | UniParc:UPI0004EDAD74 |
| InterPro:Znf_TAZ | SEG:seg | : | : | : | : |
Description
BnaC03g51080D
Coordinates
chrLK031837:-:647325..649257
Molecular Weight (calculated)
41068.4 Da
IEP (calculated)
9.479
GRAVY (calculated)
-0.240
Length
362 amino acids
Sequence
(BLAST)
(BLAST)
001: MAITATENDG VSLTTDKISY DLVETDIEII TSGRRRIPAH SGVLAAASPV LANIIEKPKS HGGSSKRVIK IVGVPCDAVS VFIRFLYSPS LTEKEMESYG
101: IHLLALSHVY MVTHLKQRCT KGVGERVTVE NVVDVLQLAR LCDAPGLCLK CMRLIHSKFK TVEQTEGWKF LQENDLFLEL DILQFIDDAE SRKKRRRRHR
201: REQNLYMQLS EAMECIEHIC TEGCTLVGPS SNLDNNMLKP GPCSAFSTCY GLQLLIRHFA VCKKRVVGKG CIRCKRMIQL LRLHSSICDQ SESCRVPLCR
301: QFKQRGEKDK KMVEDTKWNV LVRRVASAKA MSSLSQSKKK KSDVLLKEEA EDFIRIRKTK FF
101: IHLLALSHVY MVTHLKQRCT KGVGERVTVE NVVDVLQLAR LCDAPGLCLK CMRLIHSKFK TVEQTEGWKF LQENDLFLEL DILQFIDDAE SRKKRRRRHR
201: REQNLYMQLS EAMECIEHIC TEGCTLVGPS SNLDNNMLKP GPCSAFSTCY GLQLLIRHFA VCKKRVVGKG CIRCKRMIQL LRLHSSICDQ SESCRVPLCR
301: QFKQRGEKDK KMVEDTKWNV LVRRVASAKA MSSLSQSKKK KSDVLLKEEA EDFIRIRKTK FF
001: MAITATQNDG VSLNANKISY DLVETDVEII TSGRRSIPAH SGILASVSPV LTNIIEKPRK IHGGSSKKVI KILGVPCDAV SVFVRFLYSP SVTENEMEKY
101: GIHLLALSHV YMVTQLKQRC TKGVGERVTA ENVVDILQLA RLCDAPDLCL KCMRFIHYKF KTVEQTEGWK FLQEHDPFLE LDILQFIDDA ESRKKRRRRH
201: RREQNLYLQL SEAMECIEHI CTEGCTLVGP SSNLDNKSTC QAKPGPCSAF STCYGLQLLI RHFAVCKKRV DGKGCVRCKR MIQLLRLHSS ICDQSESCRV
301: PLCRQYKNRG EKDKKMVEDT KWKVLVRRVA SAKAMSSLSQ SKKKKSEVLF KEEAEDLIRI RNKLM
101: GIHLLALSHV YMVTQLKQRC TKGVGERVTA ENVVDILQLA RLCDAPDLCL KCMRFIHYKF KTVEQTEGWK FLQEHDPFLE LDILQFIDDA ESRKKRRRRH
201: RREQNLYLQL SEAMECIEHI CTEGCTLVGP SSNLDNKSTC QAKPGPCSAF STCYGLQLLI RHFAVCKKRV DGKGCVRCKR MIQLLRLHSS ICDQSESCRV
301: PLCRQYKNRG EKDKKMVEDT KWKVLVRRVA SAKAMSSLSQ SKKKKSEVLF KEEAEDLIRI RNKLM
Arabidopsis Description
BT1BTB/POZ and TAZ domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FMK7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.