Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G05690.1 | CDY16196 | AT1G26830.1 | 15772280 |
| AT1G05690.1 | CDY45004 | AT1G26830.1 | 15772280 |
| AT1G05690.1 | CDY46437 | AT1G26830.1 | 15772280 |
| AT1G05690.1 | CDY50732 | AT1G26830.1 | 15772280 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY15554 | Canola | nucleus | 86.87 | 85.85 |
| AT1G05690.1 | Thale cress | plastid | 64.68 | 74.45 |
| CDY10140 | Canola | plastid | 52.74 | 60.22 |
| VIT_05s0094g00950.t01 | Wine grape | cytosol, plastid | 49.88 | 51.35 |
| Zm00001d009478_P001 | Maize | extracellular | 18.62 | 50.65 |
| PGSC0003DMT400064939 | Potato | nucleus | 46.3 | 48.14 |
| Zm00001d035819_P001 | Maize | extracellular | 17.18 | 47.68 |
| Solyc08g014440.2.1 | Tomato | nucleus | 42.96 | 47.49 |
| PGSC0003DMT400013718 | Potato | cytosol | 28.4 | 45.08 |
| TraesCS3A01G400400.1 | Wheat | cytosol | 42.48 | 44.95 |
| TraesCS3B01G433400.1 | Wheat | nucleus | 42.72 | 44.75 |
| GSMUA_Achr6P18360_001 | Banana | plastid | 40.1 | 43.98 |
| HORVU3Hr1G090000.4 | Barley | nucleus | 43.91 | 42.99 |
| CDY36495 | Canola | cytosol | 38.66 | 42.63 |
| CDY08721 | Canola | cytosol | 38.42 | 42.37 |
| Os01t0893400-01 | Rice | nucleus | 41.53 | 42.13 |
| OQU88021 | Sorghum | nucleus | 42.48 | 41.88 |
| Zm00001d042549_P001 | Maize | nucleus | 42.48 | 40.73 |
| Solyc12g019420.1.1 | Tomato | cytosol | 23.63 | 39.13 |
| CDY50978 | Canola | nucleus, plastid | 34.61 | 38.77 |
| CDY41504 | Canola | nucleus | 30.55 | 38.55 |
| CDY29568 | Canola | nucleus | 34.37 | 37.99 |
| CDX72641 | Canola | nucleus, plastid | 34.37 | 37.89 |
| CDX75666 | Canola | nucleus | 33.65 | 37.7 |
| CDX84392 | Canola | nucleus | 30.79 | 35.64 |
| CDY39576 | Canola | nucleus | 29.59 | 33.79 |
| Zm00001d046179_P001 | Maize | cytosol, endoplasmic reticulum | 14.8 | 33.33 |
| CDY48173 | Canola | nucleus | 28.64 | 33.06 |
| CDY45741 | Canola | nucleus | 31.26 | 33.0 |
| CDY30743 | Canola | nucleus | 31.26 | 33.0 |
| CDY70710 | Canola | nucleus | 12.17 | 32.48 |
Protein Annotations
| Gene3D:1.20.1020.10 | Gene3D:1.25.40.420 | MapMan:15.5.31 | MapMan:19.2.2.8.2.2.4 | Gene3D:3.30.710.10 | GO:A0A078DBC1 |
| InterPro:BTB/POZ_dom | EnsemblPlants:CDX86561 | ProteinID:CDX86561 | ProteinID:CDX86561.1 | GO:GO:0003674 | GO:GO:0003712 |
| GO:GO:0003824 | GO:GO:0004402 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0006464 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008270 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016740 |
| GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00145184001 | InterPro:IPR000197 | InterPro:IPR000210 | InterPro:IPR035898 | PFAM:PF00651 |
| PFAM:PF02135 | PFscan:PS50097 | PFscan:PS50134 | PANTHER:PTHR24413 | PANTHER:PTHR24413:SF140 | InterPro:SKP1/BTB/POZ_sf |
| SMART:SM00225 | SMART:SM00551 | InterPro:SPOP_C | SUPFAM:SSF54695 | SUPFAM:SSF57933 | InterPro:TAZ_dom_sf |
| UniParc:UPI0004EE64A4 | InterPro:Znf_TAZ | SEG:seg | : | : | : |
Description
BnaC08g01420D
Coordinates
chrLK031846:-:625125..627370
Molecular Weight (calculated)
46977.8 Da
IEP (calculated)
8.975
GRAVY (calculated)
-0.333
Length
419 amino acids
Sequence
(BLAST)
(BLAST)
001: MKHPNSDHII GLGTIFQPSG RFKNCNIIYS QVAGFDSMAS SEVSTCAKNI PKPPPLPRVT YQASRSKPSS SSSRLVPQET VETWDKLFKE GTGADTYVEV
101: DNKSHFLAHS YILAAASPVM PQLLNQSRDK KGNSHLKFLG VPQEAVYMFI RFLYSCSYEE EEMKKYVLPL LVLSHCYSVP SLKRVCVEVL GQGWINKENV
201: IDVLQLARTC DAARISFLCT SMVIKDFKSV SSTEGWKVMT RGDRKLEQEL LEAVVEADAR KKERRKKVEE RRMYLELYEA VEALVHIYRE GCGTIGPRGK
301: ALKGSKAVCE FSACKGIEGG LRHFLGCKSS RASCGHCKRM WQLIQLHSCL CGSSDSCEVP LCRNFKEQMK KIGKREESKW RLLAENVITA RNSLGPFSSS
401: RRSASSSDLP PLCSERCCL
101: DNKSHFLAHS YILAAASPVM PQLLNQSRDK KGNSHLKFLG VPQEAVYMFI RFLYSCSYEE EEMKKYVLPL LVLSHCYSVP SLKRVCVEVL GQGWINKENV
201: IDVLQLARTC DAARISFLCT SMVIKDFKSV SSTEGWKVMT RGDRKLEQEL LEAVVEADAR KKERRKKVEE RRMYLELYEA VEALVHIYRE GCGTIGPRGK
301: ALKGSKAVCE FSACKGIEGG LRHFLGCKSS RASCGHCKRM WQLIQLHSCL CGSSDSCEVP LCRNFKEQMK KIGKREESKW RLLAENVITA RNSLGPFSSS
401: RRSASSSDLP PLCSERCCL
001: MSSSTKNIPK PPPLPCITYQ RFQSSTRKPS SLMRLVPKEA LETWDKLFKE GSGADTYVET DNKSHFPAHS SVLAAASPVI ATLLNQSRDK NGNTYLKIHG
101: VPCEAVYMFI RFLYSSCYEE EEMKKFVLHL LVLSHCYSVP SLKRLCVEIL DQGWINKENV IDVLQLARNC DVTRICFVCL SMVIKDFKSV SSTEGWKVMK
201: RSNPLLEQEL IEAVIESDSR KQERRRKLEE REVYLQLYEA MEALVHICRE GCGTIGPRDK ALKGSHTVCK FPACKGLEGA LRHFLGCKSR ASCSHCKRMW
301: QLLQLHSCIC DDSNSCKVSL CWNFKEKMKK LSKKEQSKWR LLVENIIRAR NSLGPFSSRS SGLI
101: VPCEAVYMFI RFLYSSCYEE EEMKKFVLHL LVLSHCYSVP SLKRLCVEIL DQGWINKENV IDVLQLARNC DVTRICFVCL SMVIKDFKSV SSTEGWKVMK
201: RSNPLLEQEL IEAVIESDSR KQERRRKLEE REVYLQLYEA MEALVHICRE GCGTIGPRDK ALKGSHTVCK FPACKGLEGA LRHFLGCKSR ASCSHCKRMW
301: QLLQLHSCIC DDSNSCKVSL CWNFKEKMKK LSKKEQSKWR LLVENIIRAR NSLGPFSSRS SGLI
Arabidopsis Description
BT3BTB/POZ and TAZ domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYL0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.