Factsheet for Solyc08g014440.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc01g010820.2.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G05690.1	Solyc01g010820.2.1	AT1G26830.1	15772280

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400064939	Potato	nucleus	93.4	87.84
VIT_05s0094g00950.t01	Wine grape	cytosol, plastid	62.53	58.23
AT1G05690.1	Thale cress	plastid	48.28	50.27
Solyc02g092460.2.1	Tomato	mitochondrion, nucleus	37.2	49.13
Solyc12g019420.1.1	Tomato	cytosol	32.45	48.62
TraesCS3A01G400400.1	Wheat	cytosol	48.28	46.21
Zm00001d009478_P001	Maize	extracellular	18.73	46.1
TraesCS3B01G433400.1	Wheat	nucleus	48.28	45.75
GSMUA_Achr6P18360_001	Banana	plastid	45.65	45.29
Zm00001d035819_P001	Maize	extracellular	17.94	45.03
Os01t0893400-01	Rice	nucleus	47.76	43.83
OQU88021	Sorghum	nucleus	48.81	43.53
CDX86561	Canola	nucleus	47.49	42.96
CDY15554	Canola	nucleus	47.76	42.69
CDY10140	Canola	plastid	41.16	42.51
HORVU3Hr1G090000.4	Barley	nucleus	47.76	42.29
Zm00001d042549_P001	Maize	nucleus	47.76	41.42
Bra030621.1-P	Field mustard	endoplasmic reticulum	48.02	39.57
Solyc06g071820.2.1	Tomato	nucleus	34.83	37.82
Solyc06g071830.2.1	Tomato	nucleus	32.72	37.24
Solyc03g111710.2.1	Tomato	nucleus	33.51	36.81
Zm00001d046179_P001	Maize	cytosol, endoplasmic reticulum	16.89	34.41

Protein Annotations

Gene3D:1.20.1020.10	Gene3D:1.25.40.420	MapMan:15.5.31	MapMan:19.2.2.8.2.2.4	Gene3D:3.30.710.10	InterPro:BTB/POZ_dom
GO:GO:0003674	GO:GO:0003712	GO:GO:0003824	GO:GO:0004402	GO:GO:0005488	GO:GO:0005515
GO:GO:0005516	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
GO:GO:0006139	GO:GO:0006355	GO:GO:0006464	GO:GO:0006950	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0008270	GO:GO:0009056	GO:GO:0009058	GO:GO:0009409	GO:GO:0009553
GO:GO:0009555	GO:GO:0009628	GO:GO:0009651	GO:GO:0009719	GO:GO:0009723	GO:GO:0009751
GO:GO:0009987	GO:GO:0016043	GO:GO:0016573	GO:GO:0016740	GO:GO:0019005	GO:GO:0019538
GO:GO:0030162	GO:GO:0031625	GO:GO:0042542	GO:GO:0042787	GO:GO:0043161	InterPro:IPR000197
InterPro:IPR000210	InterPro:IPR035898	UniProt:K4CJ75	PFAM:PF00651	PFAM:PF02135	PFscan:PS50097
PFscan:PS50134	PANTHER:PTHR24413	PANTHER:PTHR24413:SF140	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SMART:SM00551
InterPro:SPOP_C	SUPFAM:SSF54695	SUPFAM:SSF57933	EnsemblPlantsGene:Solyc08g014440.2	EnsemblPlants:Solyc08g014440.2.1	InterPro:TAZ_dom_sf
UniParc:UPI000276B29C	InterPro:Znf_TAZ	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr8:-:4485903..4488780

Molecular Weight (calculated)

42469.6 Da

IEP (calculated)

8.828

GRAVY (calculated)

-0.100

Length

379 amino acids

Sequence
(BLAST)

001: MASPDLHTSW LSAAVESFGG SFNIRIEEGA ADSVEFFEDP TSPVCNLPTN IPKPPPVPGK IPSRATIPRL LANSDCVPKD TWDRLFKEGF GADVHVITEN
101: GSVIPAHHAL LTVASPVLGN LLQQSKVRNG IRCIKIAGVP HDAVYVFIRF LYSACYDEVD VKKLVLHLLV LSHFYSVPSL KRVCINYLEQ GWLNSNNVID
201: VLQLARDCDA SRLTLFCIRM VVGNFKSISS TEGWKVMRRA NPTLEQELLE FVVEADTRKQ DRDGCRTIGP RDKVLKASQE ACSFPACKGL ESLVRHFSNC
301: KIKVPGGCIQ CKRMWQIFEL HSRICEEPDS CKVPLCSHFK VKMLQQTKRD EVKWKVLVSK VRAAKNAVSL FSSRRRLSF

Best Arabidopsis Sequence Match ( AT1G05690.1 )
(BLAST)

001: MSSSTKNIPK PPPLPCITYQ RFQSSTRKPS SLMRLVPKEA LETWDKLFKE GSGADTYVET DNKSHFPAHS SVLAAASPVI ATLLNQSRDK NGNTYLKIHG
101: VPCEAVYMFI RFLYSSCYEE EEMKKFVLHL LVLSHCYSVP SLKRLCVEIL DQGWINKENV IDVLQLARNC DVTRICFVCL SMVIKDFKSV SSTEGWKVMK
201: RSNPLLEQEL IEAVIESDSR KQERRRKLEE REVYLQLYEA MEALVHICRE GCGTIGPRDK ALKGSHTVCK FPACKGLEGA LRHFLGCKSR ASCSHCKRMW
301: QLLQLHSCIC DDSNSCKVSL CWNFKEKMKK LSKKEQSKWR LLVENIIRAR NSLGPFSSRS SGLI

Arabidopsis Description

BT3BTB/POZ and TAZ domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYL0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.