Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, cytosol
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 3
- golgi 3
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d018043_P001 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G05690.1 | Zm00001d018043_P001 | AT1G26830.1 | 15772280 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d035819_P001 | Maize | extracellular | 41.94 | 51.66 |
| Zm00001d009478_P001 | Maize | extracellular | 41.4 | 50.0 |
| PGSC0003DMT400013718 | Potato | cytosol | 31.72 | 22.35 |
| Zm00001d042549_P001 | Maize | nucleus | 51.08 | 21.74 |
| TraesCS3A01G400400.1 | Wheat | cytosol | 45.7 | 21.46 |
| OQU88021 | Sorghum | nucleus | 47.31 | 20.71 |
| TraesCS3B01G433400.1 | Wheat | nucleus | 44.09 | 20.5 |
| Solyc12g019420.1.1 | Tomato | cytosol | 27.42 | 20.16 |
| HORVU3Hr1G090000.4 | Barley | nucleus | 44.62 | 19.39 |
| Os01t0893400-01 | Rice | nucleus | 39.78 | 17.92 |
| Solyc08g014440.2.1 | Tomato | nucleus | 34.41 | 16.89 |
| GSMUA_Achr6P18360_001 | Banana | plastid | 33.87 | 16.49 |
| AT1G05690.1 | Thale cress | plastid | 32.26 | 16.48 |
| PGSC0003DMT400064939 | Potato | nucleus | 35.48 | 16.38 |
| CDY10140 | Canola | plastid | 31.18 | 15.8 |
| CDY15554 | Canola | nucleus | 33.87 | 14.86 |
| CDX86561 | Canola | nucleus | 33.33 | 14.8 |
| VIT_05s0094g00950.t01 | Wine grape | cytosol, plastid | 32.26 | 14.74 |
| Zm00001d042443_P001 | Maize | cytosol | 26.34 | 14.24 |
| Bra030621.1-P | Field mustard | endoplasmic reticulum | 34.41 | 13.91 |
| Zm00001d025707_P001 | Maize | cytosol | 25.27 | 13.78 |
| Zm00001d017101_P001 | Maize | plastid | 23.12 | 11.65 |
Protein Annotations
| EnsemblPlants:Zm00001d046179_P001 | EnsemblPlants:Zm00001d046179_T001 | EnsemblPlantsGene:Zm00001d046179 | Gene3D:3.30.710.10 | InterPro:SPOP_C | PANTHER:PTHR24413 |
| PANTHER:PTHR24413:SF140 | ProteinID:AQL03796.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0008429DF9 | UniProt:A0A1D6P139 |
| MapMan:15.5.31 | : | : | : | : | : |
Description
BTB/POZ and TAZ domain-containing protein 3
Coordinates
chr9:+:69829872..69831959
Molecular Weight (calculated)
20214.5 Da
IEP (calculated)
7.543
GRAVY (calculated)
-0.016
Length
186 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVVEGAVAV AVAGGSTLTV VLPTILAAVE GTYRGGSGVG NDFGDQRQHY GGDNRGGGRG DFQGLPFEPK HCTRHLKFLV GVRFEQEQMK EHALHLLVLS
101: HVFSVPSLKT VCVDQLQRGF LAPDNVVDML QLARLCDAPC LALTCVRMVI GDFKTISLTD GWKVMRRANP NFDLPKTLSH RETQAA
101: HVFSVPSLKT VCVDQLQRGF LAPDNVVDML QLARLCDAPC LALTCVRMVI GDFKTISLTD GWKVMRRANP NFDLPKTLSH RETQAA
001: MSSSTKNIPK PPPLPCITYQ RFQSSTRKPS SLMRLVPKEA LETWDKLFKE GSGADTYVET DNKSHFPAHS SVLAAASPVI ATLLNQSRDK NGNTYLKIHG
101: VPCEAVYMFI RFLYSSCYEE EEMKKFVLHL LVLSHCYSVP SLKRLCVEIL DQGWINKENV IDVLQLARNC DVTRICFVCL SMVIKDFKSV SSTEGWKVMK
201: RSNPLLEQEL IEAVIESDSR KQERRRKLEE REVYLQLYEA MEALVHICRE GCGTIGPRDK ALKGSHTVCK FPACKGLEGA LRHFLGCKSR ASCSHCKRMW
301: QLLQLHSCIC DDSNSCKVSL CWNFKEKMKK LSKKEQSKWR LLVENIIRAR NSLGPFSSRS SGLI
101: VPCEAVYMFI RFLYSSCYEE EEMKKFVLHL LVLSHCYSVP SLKRLCVEIL DQGWINKENV IDVLQLARNC DVTRICFVCL SMVIKDFKSV SSTEGWKVMK
201: RSNPLLEQEL IEAVIESDSR KQERRRKLEE REVYLQLYEA MEALVHICRE GCGTIGPRDK ALKGSHTVCK FPACKGLEGA LRHFLGCKSR ASCSHCKRMW
301: QLLQLHSCIC DDSNSCKVSL CWNFKEKMKK LSKKEQSKWR LLVENIIRAR NSLGPFSSRS SGLI
Arabidopsis Description
BT3BTB/POZ and TAZ domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYL0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.