Factsheet for HORVU3Hr1G090000.4

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
TargetP:	mitochondrion
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU6Hr1G075720.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G05690.1	HORVU6Hr1G075720.2	AT1G26830.1	15772280

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G433400.1	Wheat	nucleus	81.07	86.75
TraesCS3A01G400400.1	Wheat	cytosol	79.91	86.36
Zm00001d009478_P001	Maize	extracellular	25.23	70.13
Zm00001d035819_P001	Maize	extracellular	23.36	66.23
OQU88021	Sorghum	nucleus	64.02	64.47
Os01t0893400-01	Rice	nucleus	61.22	63.44
Zm00001d042549_P001	Maize	nucleus	61.68	60.41
GSMUA_Achr6P18360_001	Banana	plastid	48.36	54.19
VIT_05s0094g00950.t01	Wine grape	cytosol, plastid	51.17	53.81
PGSC0003DMT400064939	Potato	nucleus	46.96	49.88
AT1G05690.1	Thale cress	plastid	41.36	48.63
Solyc08g014440.2.1	Tomato	nucleus	42.29	47.76
Zm00001d046179_P001	Maize	cytosol, endoplasmic reticulum	19.39	44.62
CDX86561	Canola	nucleus	42.99	43.91
PGSC0003DMT400013718	Potato	cytosol	26.64	43.18
CDY10140	Canola	plastid	36.45	42.51
CDY15554	Canola	nucleus	41.12	41.51
Bra030621.1-P	Field mustard	endoplasmic reticulum	41.36	38.48
Solyc12g019420.1.1	Tomato	cytosol	22.66	38.34
HORVU2Hr1G083410.1	Barley	cytosol	6.54	35.0
HORVU3Hr1G092090.3	Barley	mitochondrion, nucleus	15.19	32.99
HORVU2Hr1G083430.3	Barley	nucleus	10.05	24.57
HORVU2Hr1G083490.1	Barley	extracellular	3.27	16.09

Protein Annotations

Gene3D:1.20.1020.10	Gene3D:1.25.40.420	MapMan:15.5.31	MapMan:19.2.2.8.2.2.4	Gene3D:3.30.710.10	UniProt:A0A287M7Q6
EMBL:AK364244	EMBL:AK364961	InterPro:BTB/POZ_dom	GO:GO:0003674	GO:GO:0003712	GO:GO:0003824
GO:GO:0004402	GO:GO:0005488	GO:GO:0005515	GO:GO:0005516	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0006464	GO:GO:0006950
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009058	GO:GO:0009409
GO:GO:0009553	GO:GO:0009555	GO:GO:0009628	GO:GO:0009651	GO:GO:0009719	GO:GO:0009723
GO:GO:0009751	GO:GO:0009987	GO:GO:0016043	GO:GO:0016573	GO:GO:0016740	GO:GO:0019538
GO:GO:0042542	EnsemblPlantsGene:HORVU3Hr1G090000	EnsemblPlants:HORVU3Hr1G090000.4	InterPro:IPR000197	InterPro:IPR000210	InterPro:IPR035898
PFAM:PF00651	PFAM:PF02135	PFscan:PS50097	PFscan:PS50134	PANTHER:PTHR24413	PANTHER:PTHR24413:SF140
InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SMART:SM00551	InterPro:SPOP_C	SUPFAM:SSF54695	SUPFAM:SSF57933
InterPro:TAZ_dom_sf	UniParc:UPI000B47DB5A	InterPro:Znf_TAZ	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr3H:-:630628484..630633696

Molecular Weight (calculated)

49121.2 Da

IEP (calculated)

9.279

GRAVY (calculated)

-0.257

Length

428 amino acids

Sequence
(BLAST)

001: FNRERERLRR LHHSRKISVA GSKLMAPLEL ESGPSQLFFD SPFDIYLCGT LVGTKGVVPD PPPLPETSYG KQRASRNAKE HRCVHVPEEV QDCWNRLFLE
101: GYQADVHVST DDGSEILSHS CILGIRSPVL RSMLEEARVE HGFRNILISG VPSEAARVFI RFLYSSRFEQ DEMKKYALHL LVLSHVFSVQ SLKIVCTDQL
201: ERFFLAPDNV VDVLQLARLC DAPRLSLICT RMITGDFKTI SLSEGWKVMR RVNPSLEQEL LEFLVEVDTR RQERAKRMEE KKVYLQLYEA MEALVHICRD
301: GCRTIGPWDQ KLKGSQVVCK FPACKGIELL VRHFSACKMR VPRGCGNCKR MWQLLELHSR MCATPDTCRV PLCRHFKDNM RHRNKKEEIK WVLLVCKVLG
401: SKGTIDSILK ARKISPLKPI GASHVVRQ

Best Arabidopsis Sequence Match ( AT5G67480.2 )
(BLAST)

001: MQGREDKLNK RMVTGCVDLH QSFKSADSSS VPIPPPLPSK SDGLKKKLGH SSVSTATRDM WDRLFNDGYK ADVVIYTDNG SIIYAHANIL GTASTVIKGM
101: LKQAKRHGKW HTISIRGVPH DAVRVFIRFL YSSCYEKEEM NEFIMHLLLL SHAYVVPQLK RVCEWHLEHG LLTTENVVDV FQLALLCDFP RLSLISHRMI
201: MKHFNELSAT EAWTAMKKSH PFLEKEVRDS VIIEANTRKE RMRKRNDQRI YSQLYEAMEA LVHICRDGCK TIGPHDKDFK PNHATCNYEA CKGLESLIRH
301: FAGCKLRVPG GCVHCKRMWQ LLELHSRVCA GSDQCRVPLC RNLKEKMEKQ SKKDESRWKL LVKNVLGSKK IGGSPFFLPV TNC

Arabidopsis Description

BT4BTB and TAZ domain protein 4 [Source:TAIR;Acc:AT5G67480]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.