Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G083490.1 | Barley | extracellular | 30.86 | 62.07 |
| CDY70710 | Canola | nucleus | 24.0 | 26.75 |
| KRH37914 | Soybean | cytosol | 14.86 | 26.0 |
| EES11006 | Sorghum | cytosol, endoplasmic reticulum, nucleus | 48.57 | 23.48 |
| Zm00001d025707_P001 | Maize | cytosol | 45.71 | 23.46 |
| Os04t0482300-01 | Rice | cytosol | 46.29 | 22.82 |
| HORVU3Hr1G092090.3 | Barley | mitochondrion, nucleus | 24.0 | 21.32 |
| GSMUA_Achr9P02050_001 | Banana | cytosol | 37.71 | 19.35 |
| GSMUA_AchrUn_... | Banana | cytosol, mitochondrion, nucleus | 37.14 | 18.41 |
| PGSC0003DMT400069397 | Potato | nucleus | 29.71 | 15.62 |
| KRH63672 | Soybean | nucleus | 29.14 | 15.6 |
| GSMUA_Achr6P12110_001 | Banana | nucleus | 29.71 | 15.03 |
| Solyc06g071820.2.1 | Tomato | nucleus | 29.71 | 14.9 |
| KRH03892 | Soybean | cytosol | 29.14 | 14.74 |
| VIT_17s0000g09790.t01 | Wine grape | cytosol | 29.14 | 14.7 |
| Solyc03g111710.2.1 | Tomato | nucleus | 27.43 | 13.91 |
| AT5G63160.1 | Thale cress | nucleus | 28.57 | 13.7 |
| PGSC0003DMT400039384 | Potato | nucleus | 26.86 | 13.62 |
| Solyc06g071830.2.1 | Tomato | nucleus | 25.71 | 13.51 |
| Bra038612.1-P | Field mustard | nucleus | 28.0 | 13.5 |
| PGSC0003DMT400069392 | Potato | nucleus | 26.86 | 13.47 |
| Bra029235.1-P | Field mustard | nucleus | 28.0 | 13.32 |
| CDY48173 | Canola | nucleus | 26.86 | 12.95 |
| CDX84392 | Canola | nucleus | 26.29 | 12.71 |
| Bra018065.1-P | Field mustard | nucleus | 27.43 | 12.7 |
| AT3G48360.1 | Thale cress | nucleus | 26.29 | 12.64 |
| CDY45741 | Canola | nucleus | 28.0 | 12.34 |
| CDY30743 | Canola | nucleus | 27.43 | 12.09 |
| CDY41504 | Canola | nucleus | 21.71 | 11.45 |
| CDY39576 | Canola | nucleus | 23.43 | 11.17 |
| HORVU3Hr1G090000.4 | Barley | nucleus | 24.57 | 10.05 |
| HORVU2Hr1G083410.1 | Barley | cytosol | 1.71 | 3.75 |
| KRH57174 | Soybean | cytosol | 4.57 | 3.62 |
Protein Annotations
| Gene3D:1.20.1020.10 | MapMan:35.1 | UniProt:A0A287INZ9 | GO:GO:0003674 | GO:GO:0003712 | GO:GO:0003824 |
| GO:GO:0004402 | GO:GO:0005488 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 |
| GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016573 | GO:GO:0016740 | GO:GO:0019538 | EnsemblPlantsGene:HORVU2Hr1G083430 |
| EnsemblPlants:HORVU2Hr1G083430.3 | InterPro:IPR035898 | PANTHER:PTHR24413 | PANTHER:PTHR24413:SF211 | SUPFAM:SSF57933 | InterPro:TAZ_dom_sf |
| UniParc:UPI000B4779D4 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr2H:-:605299640..605304754
Molecular Weight (calculated)
19501.8 Da
IEP (calculated)
11.641
GRAVY (calculated)
-0.749
Length
175 amino acids
Sequence
(BLAST)
(BLAST)
001: MMTSTNKQAH KQSRKQTKAK ENGEGERQME TANVKWGRGK REAKDLGQGA AREATSPDTA ASPWCRSGSL WALWSPPGLA QRKMAPGGCA RCKRMLQLFR
101: LHASVCVRPD RACRVPLCSH FKAKAQTGKA DKTWRLLVKK VTRAKAMSSL AERKVVPAVV AESWARYNRR AAKLR
101: LHASVCVRPD RACRVPLCSH FKAKAQTGKA DKTWRLLVKK VTRAKAMSSL AERKVVPAVV AESWARYNRR AAKLR
001: MERYGIHLLA LSHVYMVTQL KQRCSKGVVQ RLTTENVVDV LQLARLCDAP DVCLRSMRLI HSQFKTVEQT EGWKFIQEHD PFLELDILQF IDDAESRKKR
101: RRRHRKEQDL YMQLSEAMEC IEHICTQGCT LVGPSNVVDN NKKSMTAEKS EPCKAFSTCY GLQLLIRHFA VCKRRNNDKG CLRCKRMLQL FRLHSLICDQ
201: PDSCRVPLCR QFRKRGEQDK KMGEDTKWKL LVTRVVSAKA MTSLCQSKKN KCEQAQGV
101: RRRHRKEQDL YMQLSEAMEC IEHICTQGCT LVGPSNVVDN NKKSMTAEKS EPCKAFSTCY GLQLLIRHFA VCKRRNNDKG CLRCKRMLQL FRLHSLICDQ
201: PDSCRVPLCR QFRKRGEQDK KMGEDTKWKL LVTRVVSAKA MTSLCQSKKN KCEQAQGV
Arabidopsis Description
BT2BTB/POZ and TAZ domain-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q94BN0]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole,mitochondrion,plastid,cytosol,plasma membrane,golgi,nucleus]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole,mitochondrion,plastid,cytosol,plasma membrane,golgi,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.