Factsheet for Bra038612.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plasma membrane 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra016291.1-P
Bra024680.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G63160.1	Bra016291.1-P	AT1G26830.1	15772280
AT5G63160.1	Bra024680.1-P	AT1G26830.1	15772280

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX84392	Canola	nucleus	96.14	96.41
CDY70710	Canola	nucleus	41.6	96.18
AT5G63160.1	Thale cress	nucleus	88.98	88.49
Bra029235.1-P	Field mustard	nucleus	88.98	87.77
Bra018065.1-P	Field mustard	nucleus	69.7	66.93
PGSC0003DMT400069397	Potato	nucleus	56.47	61.56
VIT_17s0000g09790.t01	Wine grape	cytosol	57.85	60.52
KRH57174	Soybean	cytosol	36.64	60.18
Solyc06g071820.2.1	Tomato	nucleus	57.02	59.31
PGSC0003DMT400039384	Potato	nucleus	55.65	58.55
Solyc03g111710.2.1	Tomato	nucleus	55.1	57.97
Solyc06g071830.2.1	Tomato	nucleus	52.34	57.06
PGSC0003DMT400069392	Potato	nucleus	54.55	56.73
KRH63672	Soybean	nucleus	50.14	55.66
KRH03892	Soybean	cytosol	52.89	55.49
KRH37914	Soybean	cytosol	13.77	50.0
GSMUA_Achr11P...	Banana	nucleus	47.93	49.01
GSMUA_AchrUn_...	Banana	nucleus	45.45	47.97
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, nucleus	46.01	47.31
Os01t0908200-01	Rice	cytosol	43.8	45.82
GSMUA_Achr9P02050_001	Banana	cytosol	41.87	44.57
Zm00001d042443_P001	Maize	cytosol	41.6	43.9
HORVU3Hr1G092090.3	Barley	mitochondrion, nucleus	23.42	43.15
GSMUA_Achr6P12110_001	Banana	nucleus	41.05	43.06
EES01931	Sorghum	cytosol	41.05	42.69
TraesCS3D01G408100.1	Wheat	cytosol, plastid	39.94	41.55
TraesCS2A01G323000.1	Wheat	cytosol	38.57	41.3
TraesCS3D01G408000.1	Wheat	plastid	39.94	41.08
TraesCS3A01G413600.1	Wheat	cytosol, plastid	39.12	40.8
TraesCS3B01G448000.1	Wheat	cytosol, plastid	38.84	40.75
TraesCS2B01G359600.1	Wheat	cytosol	38.02	40.71
TraesCS3B01G448100.1	Wheat	plastid	39.39	40.62
GSMUA_Achr6P12420_001	Banana	nucleus	41.6	40.59
TraesCS2D01G339900.1	Wheat	cytosol	37.74	40.41
TraesCS2B01G359400.1	Wheat	cytosol	37.47	39.31
TraesCS3A01G413700.1	Wheat	cytosol, plastid	37.74	39.03
HORVU2Hr1G083410.1	Barley	cytosol	8.54	38.75
Zm00001d025707_P001	Maize	cytosol	36.36	38.71
TraesCS2A01G323200.1	Wheat	cytosol	36.64	38.44
Os04t0482300-01	Rice	cytosol	36.91	37.75
EES11006	Sorghum	cytosol, endoplasmic reticulum, nucleus	36.64	36.74
TraesCS2D01G339700.1	Wheat	cytosol	38.02	36.41
EES05370	Sorghum	plastid	34.99	35.67
Bra017839.1-P	Field mustard	nucleus	36.36	34.83
Zm00001d017101_P001	Maize	plastid	34.99	34.42
Bra011776.1-P	Field mustard	nucleus, plastid	34.99	33.96
Bra024446.1-P	Field mustard	cytosol	35.26	33.68
Bra030621.1-P	Field mustard	endoplasmic reticulum	35.54	28.04
HORVU2Hr1G083430.3	Barley	nucleus	13.5	28.0
HORVU2Hr1G083490.1	Barley	extracellular	4.68	19.54
Os02t0596700-00	Rice	plastid	14.6	17.79

Protein Annotations

Gene3D:1.20.1020.10	Gene3D:1.25.40.420	MapMan:15.5.31	MapMan:19.2.2.8.2.2.4	Gene3D:3.30.710.10	InterPro:BTB/POZ_dom
EnsemblPlantsGene:Bra038612	EnsemblPlants:Bra038612.1	EnsemblPlants:Bra038612.1-P	GO:GO:0003674	GO:GO:0003712	GO:GO:0003824
GO:GO:0004402	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152
GO:GO:0008270	GO:GO:0009058	GO:GO:0009987	GO:GO:0016043	GO:GO:0016573	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000197	InterPro:IPR000210	InterPro:IPR035898	UniProt:M4FBZ6	PFAM:PF00651
PFAM:PF02135	PFscan:PS50097	PANTHER:PTHR24413	PANTHER:PTHR24413:SF75	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225
SMART:SM00551	InterPro:SPOP_C	SUPFAM:SSF54695	SUPFAM:SSF57933	InterPro:TAZ_dom_sf	UniParc:UPI000253F248
InterPro:Znf_TAZ	SEG:seg	:	:	:	:

Description

AT5G63160 (E=2e-170) BT1 | BT1 (BTB AND TAZ DOMAIN PROTEIN 1); protein binding / transcription regulator

Coordinates

chrA06:-:14183380..14184998

Molecular Weight (calculated)

41185.4 Da

IEP (calculated)

9.577

GRAVY (calculated)

-0.288

Length

363 amino acids

Sequence
(BLAST)

001: MAITATENDG VSLITDKISY DLVETDVEII TSGRGRIPAH SGVLAAASPV LKNIIEKPRK SHGGSSKRVI KILGVPCDAV SVFIRFLYSP SLTEKEMESY
101: GIHLLALSHV YMVTHLKQRC TKGVGERVTV ENVVDVLQLA RLCDAPGLCL KCMRLIHSKF KTVEQTEGWK FLQENDPFLE LDILQFIDDA ESRKKRRRRH
201: RREQNLYMQL SEAMECIEHI CTEGCTLVGP SSNLDNNKLK AGPCSAFSTC YGLQLLIRHF AVCKKRVDGK GCIRCKRMIQ LFRLHSSICD QSESCRVPLC
301: RQFKQRGEKD KKMVEDTKWN VLVRRVASAK AMSSLSQSKK KKSDVLFKEE AEDFIRIRKT KVF

Best Arabidopsis Sequence Match ( AT5G63160.1 )
(BLAST)

001: MAITATQNDG VSLNANKISY DLVETDVEII TSGRRSIPAH SGILASVSPV LTNIIEKPRK IHGGSSKKVI KILGVPCDAV SVFVRFLYSP SVTENEMEKY
101: GIHLLALSHV YMVTQLKQRC TKGVGERVTA ENVVDILQLA RLCDAPDLCL KCMRFIHYKF KTVEQTEGWK FLQEHDPFLE LDILQFIDDA ESRKKRRRRH
201: RREQNLYLQL SEAMECIEHI CTEGCTLVGP SSNLDNKSTC QAKPGPCSAF STCYGLQLLI RHFAVCKKRV DGKGCVRCKR MIQLLRLHSS ICDQSESCRV
301: PLCRQYKNRG EKDKKMVEDT KWKVLVRRVA SAKAMSSLSQ SKKKKSEVLF KEEAEDLIRI RNKLM

Arabidopsis Description

BT1BTB/POZ and TAZ domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FMK7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.