Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G323200.1 | Wheat | cytosol | 96.24 | 96.24 |
| HORVU2Hr1G083410.1 | Barley | cytosol | 21.39 | 92.5 |
| TraesCS2D01G339700.1 | Wheat | cytosol | 97.98 | 89.45 |
| TraesCS2B01G359600.1 | Wheat | cytosol | 84.1 | 85.84 |
| Zm00001d025707_P001 | Maize | cytosol | 69.08 | 70.09 |
| Os04t0482300-01 | Rice | cytosol | 70.81 | 69.01 |
| EES11006 | Sorghum | cytosol, endoplasmic reticulum, nucleus | 71.1 | 67.96 |
| GSMUA_Achr9P02050_001 | Banana | cytosol | 50.58 | 51.32 |
| GSMUA_AchrUn_... | Banana | cytosol, mitochondrion, nucleus | 52.31 | 51.27 |
| GSMUA_Achr6P12110_001 | Banana | nucleus | 49.13 | 49.13 |
| KRH37914 | Soybean | cytosol | 12.43 | 43.0 |
| PGSC0003DMT400069397 | Potato | nucleus | 40.75 | 42.34 |
| TraesCS3B01G448000.1 | Wheat | cytosol, plastid | 41.33 | 41.33 |
| KRH03892 | Soybean | cytosol | 41.33 | 41.33 |
| VIT_17s0000g09790.t01 | Wine grape | cytosol | 40.46 | 40.35 |
| Solyc03g111710.2.1 | Tomato | nucleus | 40.17 | 40.29 |
| PGSC0003DMT400039384 | Potato | nucleus | 40.17 | 40.29 |
| Solyc06g071820.2.1 | Tomato | nucleus | 40.46 | 40.11 |
| TraesCS3B01G448100.1 | Wheat | plastid | 40.75 | 40.06 |
| KRH57174 | Soybean | cytosol | 25.43 | 39.82 |
| KRH63672 | Soybean | nucleus | 37.57 | 39.76 |
| AT3G48360.1 | Thale cress | nucleus | 40.46 | 38.46 |
| CDY41504 | Canola | nucleus | 36.42 | 37.95 |
| Solyc06g071830.2.1 | Tomato | nucleus | 36.13 | 37.54 |
| Bra038612.1-P | Field mustard | nucleus | 39.31 | 37.47 |
| CDX84392 | Canola | nucleus | 38.73 | 37.02 |
| AT5G63160.1 | Thale cress | nucleus | 39.02 | 36.99 |
| PGSC0003DMT400069392 | Potato | nucleus | 37.28 | 36.96 |
| Bra029235.1-P | Field mustard | nucleus | 38.73 | 36.41 |
| CDY48173 | Canola | nucleus | 38.15 | 36.36 |
| CDY70710 | Canola | nucleus | 16.47 | 36.31 |
| Bra018065.1-P | Field mustard | nucleus | 38.44 | 35.19 |
| CDY39576 | Canola | nucleus | 35.84 | 33.79 |
| CDY30743 | Canola | nucleus | 38.73 | 33.75 |
| CDY45741 | Canola | nucleus | 38.73 | 33.75 |
| TraesCS3B01G433400.1 | Wheat | nucleus | 34.97 | 30.25 |
Protein Annotations
| Gene3D:1.20.1020.10 | MapMan:15.5.31 | MapMan:19.2.2.8.2.2.4 | Gene3D:3.30.710.10 | InterPro:BTB/POZ_dom | GO:GO:0003674 |
| GO:GO:0003712 | GO:GO:0003824 | GO:GO:0004402 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0006464 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016043 |
| GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR000197 | InterPro:IPR000210 | InterPro:IPR035898 | PFAM:PF00651 |
| PFAM:PF02135 | PFscan:PS50097 | PANTHER:PTHR24413 | PANTHER:PTHR24413:SF211 | InterPro:SKP1/BTB/POZ_sf | SMART:SM00225 |
| SMART:SM00551 | SUPFAM:SSF54695 | SUPFAM:SSF57933 | InterPro:TAZ_dom_sf | EnsemblPlantsGene:TraesCS2B01G359400 | EnsemblPlants:TraesCS2B01G359400.1 |
| InterPro:Znf_TAZ | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr2B:+:512909195..512910997
Molecular Weight (calculated)
38162.2 Da
IEP (calculated)
9.684
GRAVY (calculated)
-0.179
Length
346 amino acids
Sequence
(BLAST)
(BLAST)
001: MTICAGFDSY RASPADMRVV TSDGQSIAAH SYVLASASPV LERMIDRAQR GWGAECTIPV LGVSFDAVHA FIHFLYSSKS KVVPAEEEAV GANWAQLLAL
101: AHAYRVGWLK RAAEAAVSAR LTPERAVDML KLARLCDAPR LYMRCARLAA KEFASVEQSD GWRFARRHDA ALELELLTLL EDADQRNERW ARERAAQEAC
201: RQLGEAMASL EHIFPGDSGA KAGCADADAP CARAGCTCRG LQVLMRHFAT CPKKMAPGGC ARCKRMLQLF RLHASVCDRP DRACRVPLCS HFKAKAQTGK
301: ADKTWRLLVK KVTRAKVMSS LAERKVVPEV VAESWARYSR RGAKLR
101: AHAYRVGWLK RAAEAAVSAR LTPERAVDML KLARLCDAPR LYMRCARLAA KEFASVEQSD GWRFARRHDA ALELELLTLL EDADQRNERW ARERAAQEAC
201: RQLGEAMASL EHIFPGDSGA KAGCADADAP CARAGCTCRG LQVLMRHFAT CPKKMAPGGC ARCKRMLQLF RLHASVCDRP DRACRVPLCS HFKAKAQTGK
301: ADKTWRLLVK KVTRAKVMSS LAERKVVPEV VAESWARYSR RGAKLR
001: MEAVLVAMSV PATTEDDGFS LITDKLSYNL TPTSDVEIVT SDNRRIPAHS GVLASASPVL MNIMKKPMRR YRGCGSKRVI KILGVPCDAV SVFIKFLYSS
101: SLTEDEMERY GIHLLALSHV YMVTQLKQRC SKGVVQRLTT ENVVDVLQLA RLCDAPDVCL RSMRLIHSQF KTVEQTEGWK FIQEHDPFLE LDILQFIDDA
201: ESRKKRRRRH RKEQDLYMQL SEAMECIEHI CTQGCTLVGP SNVVDNNKKS MTAEKSEPCK AFSTCYGLQL LIRHFAVCKR RNNDKGCLRC KRMLQLFRLH
301: SLICDQPDSC RVPLCRQFRK RGEQDKKMGE DTKWKLLVTR VVSAKAMTSL CQSKKNKCEQ AQGV
101: SLTEDEMERY GIHLLALSHV YMVTQLKQRC SKGVVQRLTT ENVVDVLQLA RLCDAPDVCL RSMRLIHSQF KTVEQTEGWK FIQEHDPFLE LDILQFIDDA
201: ESRKKRRRRH RKEQDLYMQL SEAMECIEHI CTQGCTLVGP SNVVDNNKKS MTAEKSEPCK AFSTCYGLQL LIRHFAVCKR RNNDKGCLRC KRMLQLFRLH
301: SLICDQPDSC RVPLCRQFRK RGEQDKKMGE DTKWKLLVTR VVSAKAMTSL CQSKKNKCEQ AQGV
Arabidopsis Description
BT2BTB/POZ and TAZ domain-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q94BN0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.