CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG91803
KRG94435
KRG99095
KRH07021
KRH07022
KRH34983
KRH34984
KRH45896
KRH70713

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G48360.1	KRG99095	AT1G26830.1	15772280
AT3G48360.1	KRH45896	AT1G26830.1	15772280
AT3G48360.1	KRH70713	AT1G26830.1	15772280
AT3G48360.1	KRG91803	AT1G35670.1	19130088
AT3G48360.1	KRH34983	AT1G35670.1	19130088
AT3G48360.1	KRH34984	AT1G35670.1	19130088
AT3G48360.1	KRG94435	AT3G01770.1	15316289
AT3G48360.1	KRH07021	AT3G01770.1	15316289
AT3G48360.1	KRH07022	AT3G01770.1	15316289
AT3G48360.1	KRG91803	AT4G09570.1	19130088
AT3G48360.1	KRH34983	AT4G09570.1	19130088
AT3G48360.1	KRH34984	AT4G09570.1	19130088
AT5G63160.1	KRG99095	AT1G26830.1	15772280
AT5G63160.1	KRH45896	AT1G26830.1	15772280
AT5G63160.1	KRH70713	AT1G26830.1	15772280
AT5G63160.1	KRG94435	AT3G01770.1	15316289
AT5G63160.1	KRH07021	AT3G01770.1	15316289
AT5G63160.1	KRH07022	AT3G01770.1	15316289

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH03892	Soybean	cytosol	82.81	52.89
KRH63672	Soybean	nucleus	67.42	45.57
VIT_17s0000g09790.t01	Wine grape	cytosol	62.9	40.06
PGSC0003DMT400069397	Potato	nucleus	59.73	39.64
CDY41504	Canola	nucleus	58.82	39.16
HORVU2Hr1G083410.1	Barley	cytosol	14.03	38.75
Solyc06g071820.2.1	Tomato	nucleus	59.28	37.54
Bra029235.1-P	Field mustard	nucleus	61.99	37.23
AT3G48360.1	Thale cress	nucleus	61.09	37.09
AT5G63160.1	Thale cress	nucleus	61.09	36.99
Bra038612.1-P	Field mustard	nucleus	60.18	36.64
PGSC0003DMT400039384	Potato	nucleus	56.56	36.23
CDY48173	Canola	nucleus	59.28	36.09
Solyc03g111710.2.1	Tomato	nucleus	56.11	35.94
CDX84392	Canola	nucleus	58.37	35.64
CDY39576	Canola	nucleus	58.82	35.42
PGSC0003DMT400069392	Potato	nucleus	55.66	35.24
Solyc06g071830.2.1	Tomato	nucleus	52.94	35.14
CDY45741	Canola	nucleus	62.9	35.01
CDY30743	Canola	nucleus	61.99	34.51
Bra018065.1-P	Field mustard	nucleus	58.37	34.13
GSMUA_AchrUn_...	Banana	nucleus	51.13	32.85
GSMUA_Achr11P...	Banana	nucleus	50.23	31.27
Os01t0908200-01	Rice	cytosol	48.87	31.12
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, nucleus	48.42	30.31
GSMUA_Achr6P12110_001	Banana	nucleus	46.61	29.77
GSMUA_Achr9P02050_001	Banana	cytosol	45.7	29.62
EES01931	Sorghum	cytosol	46.61	29.51
Zm00001d042443_P001	Maize	cytosol	45.7	29.36
GSMUA_Achr6P12420_001	Banana	nucleus	49.32	29.3
TraesCS3B01G448100.1	Wheat	plastid	46.61	29.26
TraesCS3D01G408100.1	Wheat	cytosol, plastid	46.15	29.23
TraesCS3D01G408000.1	Wheat	plastid	46.61	29.18
TraesCS3A01G413600.1	Wheat	cytosol, plastid	44.8	28.45
TraesCS3B01G448000.1	Wheat	cytosol, plastid	44.34	28.32
TraesCS3A01G413700.1	Wheat	cytosol, plastid	44.34	27.92
TraesCS2A01G323000.1	Wheat	cytosol	40.27	26.25
TraesCS2B01G359600.1	Wheat	cytosol	39.82	25.96
Zm00001d025707_P001	Maize	cytosol	39.82	25.81
TraesCS2D01G339900.1	Wheat	cytosol	39.37	25.66
Os04t0482300-01	Rice	cytosol	41.18	25.63
TraesCS2A01G323200.1	Wheat	cytosol	39.82	25.43
TraesCS2B01G359400.1	Wheat	cytosol	39.82	25.43
KRH77116	Soybean	plastid	42.53	24.8
EES11006	Sorghum	cytosol, endoplasmic reticulum, nucleus	39.82	24.31
EES05370	Sorghum	plastid	38.91	24.16
Zm00001d017101_P001	Maize	plastid	38.46	23.04
TraesCS2D01G339700.1	Wheat	cytosol	39.37	22.96
HORVU3Hr1G092090.3	Barley	mitochondrion, nucleus	17.65	19.8
KRH37914	Soybean	cytosol	6.79	15.0
Os02t0596700-00	Rice	plastid	14.03	10.4
CDY70710	Canola	nucleus	7.24	10.19
HORVU2Hr1G083430.3	Barley	nucleus	3.62	4.57
HORVU2Hr1G083490.1	Barley	extracellular	0.45	1.15

Protein Annotations

Gene3D:1.25.40.420	MapMan:15.5.31	MapMan:19.2.2.8.2.2.4	Gene3D:3.30.710.10	UniProt:A0A0R0JQR9	UniProt:A0A2K7KJ98
EMBL:ACUP02002815	InterPro:BTB/POZ_dom	EnsemblPlantsGene:GLYMA_05G0439001	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0019005	GO:GO:0019538
GO:GO:0030162	GO:GO:0031625	GO:GO:0042787	GO:GO:0043161	InterPro:IPR000210	EnsemblPlants:KRH57174
ProteinID:KRH57174	ProteinID:KRH57174.1	PFAM:PF00651	PFscan:PS50097	PANTHER:PTHR24413	PANTHER:PTHR24413:SF75
InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	InterPro:SPOP_C	SUPFAM:SSF54695	UniParc:UPI0006ED55CF	UniParc:UPI000C8754EB

Description

hypothetical protein

Coordinates

chr5:-:3910547..3911751

Molecular Weight (calculated)

25533.0 Da

IEP (calculated)

7.836

GRAVY (calculated)

-0.268

Length

221 amino acids

Sequence
(BLAST)

001: MAPQTISIHY HTTRFLPQPD VFIRTSHGTR IPAHAGILAS MSPVFDNFID RPRKHRSSER IIQIHGVPCD AVTAFVGFLY SSRCTEEEMD KYGMHLLALS
101: HVYMVPQLKQ RCIKGLTHRL TTENVVDVLQ LARLCDAPDL HLRCMKLLAN NFKAVEATEG WKFLVKHDPW LELDILRFID EHETRKKKSR KYRMEQGLYA
201: ELSEAMECLE HICYDGCTHV G

Best Arabidopsis Sequence Match ( AT3G48360.1 )
(BLAST)

001: MEAVLVAMSV PATTEDDGFS LITDKLSYNL TPTSDVEIVT SDNRRIPAHS GVLASASPVL MNIMKKPMRR YRGCGSKRVI KILGVPCDAV SVFIKFLYSS
101: SLTEDEMERY GIHLLALSHV YMVTQLKQRC SKGVVQRLTT ENVVDVLQLA RLCDAPDVCL RSMRLIHSQF KTVEQTEGWK FIQEHDPFLE LDILQFIDDA
201: ESRKKRRRRH RKEQDLYMQL SEAMECIEHI CTQGCTLVGP SNVVDNNKKS MTAEKSEPCK AFSTCYGLQL LIRHFAVCKR RNNDKGCLRC KRMLQLFRLH
301: SLICDQPDSC RVPLCRQFRK RGEQDKKMGE DTKWKLLVTR VVSAKAMTSL CQSKKNKCEQ AQGV

Arabidopsis Description

BT2BTB/POZ and TAZ domain-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q94BN0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.