CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 2
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG91803
KRG94435
KRG99095
KRH07021
KRH07022
KRH34983
KRH34984
KRH45896
KRH70713

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G48360.1	KRG99095	AT1G26830.1	15772280
AT3G48360.1	KRH45896	AT1G26830.1	15772280
AT3G48360.1	KRH70713	AT1G26830.1	15772280
AT3G48360.1	KRG91803	AT1G35670.1	19130088
AT3G48360.1	KRH34983	AT1G35670.1	19130088
AT3G48360.1	KRH34984	AT1G35670.1	19130088
AT3G48360.1	KRG94435	AT3G01770.1	15316289
AT3G48360.1	KRH07021	AT3G01770.1	15316289
AT3G48360.1	KRH07022	AT3G01770.1	15316289
AT3G48360.1	KRG91803	AT4G09570.1	19130088
AT3G48360.1	KRH34983	AT4G09570.1	19130088
AT3G48360.1	KRH34984	AT4G09570.1	19130088
AT5G63160.1	KRG99095	AT1G26830.1	15772280
AT5G63160.1	KRH45896	AT1G26830.1	15772280
AT5G63160.1	KRH70713	AT1G26830.1	15772280
AT5G63160.1	KRG94435	AT3G01770.1	15316289
AT5G63160.1	KRH07021	AT3G01770.1	15316289
AT5G63160.1	KRH07022	AT3G01770.1	15316289

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH57174	Soybean	cytosol	52.89	82.81
KRH37914	Soybean	cytosol	22.25	77.0
KRH63672	Soybean	nucleus	62.14	65.75
VIT_17s0000g09790.t01	Wine grape	cytosol	61.27	61.1
PGSC0003DMT400069397	Potato	nucleus	57.8	60.06
Solyc06g071820.2.1	Tomato	nucleus	58.38	57.88
PGSC0003DMT400039384	Potato	nucleus	55.78	55.94
Solyc03g111710.2.1	Tomato	nucleus	55.49	55.65
PGSC0003DMT400069392	Potato	nucleus	55.2	54.73
Solyc06g071830.2.1	Tomato	nucleus	52.6	54.65
CDY41504	Canola	nucleus	51.16	53.31
Bra029235.1-P	Field mustard	nucleus	56.65	53.26
AT5G63160.1	Thale cress	nucleus	56.07	53.15
Bra038612.1-P	Field mustard	nucleus	55.49	52.89
AT3G48360.1	Thale cress	nucleus	55.2	52.47
CDX84392	Canola	nucleus	54.34	51.93
CDY48173	Canola	nucleus	53.18	50.69
Bra018065.1-P	Field mustard	nucleus	54.34	49.74
CDY70710	Canola	nucleus	22.54	49.68
CDY45741	Canola	nucleus	56.65	49.37
CDY30743	Canola	nucleus	56.07	48.87
GSMUA_Achr11P...	Banana	nucleus	50.0	48.73
GSMUA_AchrUn_...	Banana	nucleus	48.27	48.55
CDY39576	Canola	nucleus	51.45	48.5
GSMUA_Achr9P02050_001	Banana	cytosol	46.53	47.21
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, nucleus	47.4	46.46
Zm00001d042443_P001	Maize	cytosol	45.09	45.35
HORVU3Hr1G092090.3	Barley	mitochondrion, nucleus	25.72	45.18
Os01t0908200-01	Rice	cytosol	45.09	44.96
GSMUA_Achr6P12110_001	Banana	nucleus	44.51	44.51
EES01931	Sorghum	cytosol	44.22	43.84
TraesCS3D01G408100.1	Wheat	cytosol, plastid	44.22	43.84
TraesCS3A01G413600.1	Wheat	cytosol, plastid	43.64	43.39
TraesCS2A01G323000.1	Wheat	cytosol	42.49	43.36
TraesCS3B01G448100.1	Wheat	plastid	43.64	42.9
TraesCS3B01G448000.1	Wheat	cytosol, plastid	42.77	42.77
TraesCS2B01G359600.1	Wheat	cytosol	41.91	42.77
TraesCS3D01G408000.1	Wheat	plastid	43.35	42.49
TraesCS2D01G339900.1	Wheat	cytosol	41.04	41.89
GSMUA_Achr6P12420_001	Banana	nucleus	44.8	41.67
Zm00001d025707_P001	Maize	cytosol	41.04	41.64
TraesCS3A01G413700.1	Wheat	cytosol, plastid	42.2	41.6
TraesCS2A01G323200.1	Wheat	cytosol	41.33	41.33
TraesCS2B01G359400.1	Wheat	cytosol	41.33	41.33
Os04t0482300-01	Rice	cytosol	41.33	40.28
EES11006	Sorghum	cytosol, endoplasmic reticulum, nucleus	40.75	38.95
HORVU2Hr1G083410.1	Barley	cytosol	8.96	38.75
TraesCS2D01G339700.1	Wheat	cytosol	41.62	37.99
EES05370	Sorghum	plastid	37.28	36.24
KRH77116	Soybean	plastid	39.02	35.62
Zm00001d017101_P001	Maize	plastid	35.84	33.6
HORVU2Hr1G083430.3	Barley	nucleus	14.74	29.14
HORVU2Hr1G083490.1	Barley	extracellular	6.07	24.14
Os02t0596700-00	Rice	plastid	13.87	16.11

Protein Annotations

Gene3D:1.20.1020.10	Gene3D:1.25.40.420	EntrezGene:100807120	MapMan:15.5.31	MapMan:19.2.2.8.2.2.4	Gene3D:3.30.710.10
UniProt:A0A0R0FNB1	EMBL:ACUP02010365	InterPro:BTB/POZ_dom	EnsemblPlantsGene:GLYMA_17G126400	GO:GO:0003674	GO:GO:0003712
GO:GO:0003824	GO:GO:0004402	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006139	GO:GO:0006355	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009056	GO:GO:0009058	GO:GO:0009987
GO:GO:0016043	GO:GO:0016573	GO:GO:0016740	GO:GO:0019005	GO:GO:0019538	GO:GO:0030162
GO:GO:0031625	GO:GO:0042787	GO:GO:0043161	InterPro:IPR000197	InterPro:IPR000210	InterPro:IPR035898
EnsemblPlants:KRH03892	ProteinID:KRH03892	ProteinID:KRH03892.1	PFAM:PF00651	PFAM:PF02135	PFscan:PS50097
PANTHER:PTHR24413	PANTHER:PTHR24413:SF75	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SMART:SM00551	InterPro:SPOP_C
SUPFAM:SSF54695	SUPFAM:SSF57933	InterPro:TAZ_dom_sf	UniParc:UPI000189D9F1	InterPro:Znf_TAZ	:

Description

hypothetical protein

Coordinates

chr17:-:10066152..10069391

Molecular Weight (calculated)

40203.2 Da

IEP (calculated)

9.242

GRAVY (calculated)

-0.382

Length

346 amino acids

Sequence
(BLAST)

001: MAPQTISILN LLPEPDVFIH TSHGTRIPAH APILASMSPV LENLIDRPRK HRSSERIIQI HGVPCDAVTA FVRFLYSSRC TEEEIDQYGM HLLALSHVYM
101: VQQLKQRCIK GLTHRLTTES VVDVLQLARL CDAPDLHLRC MKLLAKNFKA VEATEGWKFL VKHDPWLELD ILRFIDEHET RKKKSRRYRM EQGIYAELSE
201: AMECLEHICY EGCTHVGPYD AEVKRERTPC GRFATCQGLQ VLIRHFATCE KKVRGGCVRC KRMWQLFRLH SYVCHDTDSS CKVPFCRQFQ LRMQQEKRKD
301: DAKWKLLARK VASAKVMSSL SLPKRKRDEE TRVTMDNPGI RSFKLL

Best Arabidopsis Sequence Match ( AT5G63160.1 )
(BLAST)

001: MAITATQNDG VSLNANKISY DLVETDVEII TSGRRSIPAH SGILASVSPV LTNIIEKPRK IHGGSSKKVI KILGVPCDAV SVFVRFLYSP SVTENEMEKY
101: GIHLLALSHV YMVTQLKQRC TKGVGERVTA ENVVDILQLA RLCDAPDLCL KCMRFIHYKF KTVEQTEGWK FLQEHDPFLE LDILQFIDDA ESRKKRRRRH
201: RREQNLYLQL SEAMECIEHI CTEGCTLVGP SSNLDNKSTC QAKPGPCSAF STCYGLQLLI RHFAVCKKRV DGKGCVRCKR MIQLLRLHSS ICDQSESCRV
301: PLCRQYKNRG EKDKKMVEDT KWKVLVRRVA SAKAMSSLSQ SKKKKSEVLF KEEAEDLIRI RNKLM

Arabidopsis Description

BT1BTB/POZ and TAZ domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FMK7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.