Factsheet for Os02t0596700-00

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 4
plastid 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0601800-03
Os02t0746000-01
Os11t0171500-01
Os12t0169800-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G48360.1	Os02t0746000-01	AT1G26830.1	15772280
AT3G48360.1	Os11t0171500-01	AT1G35670.1	19130088
AT3G48360.1	Os12t0169800-00	AT1G35670.1	19130088
AT3G48360.1	Os02t0601800-03	AT3G01770.1	15316289
AT3G48360.1	Os11t0171500-01	AT4G09570.1	19130088
AT3G48360.1	Os12t0169800-00	AT4G09570.1	19130088
AT5G63160.1	Os02t0746000-01	AT1G26830.1	15772280
AT5G63160.1	Os02t0601800-03	AT3G01770.1	15316289

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES05370	Sorghum	plastid	26.17	21.91
Zm00001d017101_P001	Maize	plastid	26.17	21.14
Os04t0482300-01	Rice	cytosol	24.16	20.28
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, nucleus	22.15	18.7
Os01t0908200-01	Rice	cytosol	20.47	17.58
GSMUA_Achr9P02050_001	Banana	cytosol	19.8	17.3
KRH63672	Soybean	nucleus	17.79	16.21
PGSC0003DMT400069397	Potato	nucleus	17.79	15.92
PGSC0003DMT400069392	Potato	nucleus	18.46	15.76
CDY41504	Canola	nucleus	17.45	15.66
Solyc06g071830.2.1	Tomato	nucleus	17.45	15.62
GSMUA_Achr6P12110_001	Banana	nucleus	18.12	15.61
VIT_17s0000g09790.t01	Wine grape	cytosol	17.45	14.99
CDX84392	Canola	nucleus	18.12	14.92
Solyc06g071820.2.1	Tomato	nucleus	17.45	14.9
Solyc03g111710.2.1	Tomato	nucleus	17.11	14.78
PGSC0003DMT400039384	Potato	nucleus	17.11	14.78
Bra029235.1-P	Field mustard	nucleus	18.12	14.67
Bra038612.1-P	Field mustard	nucleus	17.79	14.6
AT3G48360.1	Thale cress	nucleus	17.79	14.56
AT5G63160.1	Thale cress	nucleus	17.45	14.25
CDY39576	Canola	nucleus	17.45	14.17
CDY30743	Canola	nucleus	18.79	14.11
KRH57174	Soybean	cytosol	10.4	14.03
KRH03892	Soybean	cytosol	16.11	13.87
CDY48173	Canola	nucleus	16.44	13.5
CDY45741	Canola	nucleus	17.79	13.35
Bra018065.1-P	Field mustard	nucleus	16.78	13.23
Os01t0893400-01	Rice	nucleus	17.11	12.35
CDY70710	Canola	nucleus	6.04	11.46
KRH37914	Soybean	cytosol	3.36	10.0

Protein Annotations

EnsemblPlants:Os02t0596700-00	EnsemblPlantsGene:Os02g0596700	Gene3D:3.30.710.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:BTB/POZ_dom	InterPro:IPR000210	InterPro:SKP1/BTB/POZ_sf	PANTHER:PTHR24413	PANTHER:PTHR24413:SF211	PFAM:PF00651
PFscan:PS50097	ProteinID:BAS79559.1	SEG:seg	SUPFAM:SSF54695	UniParc:UPI000393B815	UniProt:A0A0P0VL49
MapMan:35.2	:	:	:	:	:

Description

Similar to protein binding protein. (Os02t0596700-00)

Coordinates

chr2:+:23172608..23174864

Molecular Weight (calculated)

30044.4 Da

IEP (calculated)

12.690

GRAVY (calculated)

-0.331

Length

298 amino acids

Sequence
(BLAST)

001: MALSTAFSAL PTSPADVRVV TADGSGIRAH SSVLASASPV LERMIEQAPR GGVVPIAGAS TGAVVVFLRF LYAAGGGGGG GVGGGGAGGA RGGADGAGAR
101: VPCGGPAEAA RGGGGGGAGG GRGRGGRDEA GGALRRAAPV PVVRAARRQG ARGGPGVRGL ALRRAPRRRA PGRPAPADPR RRPEEGEVGE GAGLPGRVPA
201: AQRRHGRPGA RLRPRRPRIA TAAAAAAHRP VLQDGLPLRA PAGPPAAREA LLRRLRQESR RRLHALPALL PAPPATLLRL RQVRRRFLRS SPLQQLQD

Best Arabidopsis Sequence Match ( AT3G48360.1 )
(BLAST)

001: MEAVLVAMSV PATTEDDGFS LITDKLSYNL TPTSDVEIVT SDNRRIPAHS GVLASASPVL MNIMKKPMRR YRGCGSKRVI KILGVPCDAV SVFIKFLYSS
101: SLTEDEMERY GIHLLALSHV YMVTQLKQRC SKGVVQRLTT ENVVDVLQLA RLCDAPDVCL RSMRLIHSQF KTVEQTEGWK FIQEHDPFLE LDILQFIDDA
201: ESRKKRRRRH RKEQDLYMQL SEAMECIEHI CTQGCTLVGP SNVVDNNKKS MTAEKSEPCK AFSTCYGLQL LIRHFAVCKR RNNDKGCLRC KRMLQLFRLH
301: SLICDQPDSC RVPLCRQFRK RGEQDKKMGE DTKWKLLVTR VVSAKAMTSL CQSKKNKCEQ AQGV

Arabidopsis Description

BT2BTB/POZ and TAZ domain-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q94BN0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.