Factsheet for Os02t0601800-03

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0908200-01
Os02t0596700-00
Os04t0482300-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G01770.1	Os01t0908200-01	AT3G48360.1	15316289
AT3G01770.1	Os02t0596700-00	AT3G48360.1	15316289
AT3G01770.1	Os04t0482300-01	AT3G48360.1	15316289
AT3G01770.1	Os01t0908200-01	AT5G63160.1	15316289
AT3G01770.1	Os02t0596700-00	AT5G63160.1	15316289
AT3G01770.1	Os04t0482300-01	AT5G63160.1	15316289

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G214000.1	Wheat	nucleus	80.95	81.87
TraesCS6D01G196600.3	Wheat	nucleus	80.53	81.79
EES07108	Sorghum	nucleus	81.37	81.72
TraesCS3D01G087900.4	Wheat	nucleus	80.53	80.31
HORVU6Hr1G054560.16	Barley	nucleus	80.39	80.28
Zm00001d017126_P001	Maize	nucleus	78.01	80.03
TraesCS6B01G244000.2	Wheat	plastid	80.39	79.72
TraesCS3B01G103200.2	Wheat	nucleus	79.55	79.44
TraesCS3A01G087800.1	Wheat	plastid	67.65	79.18
HORVU3Hr1G015760.1	Barley	nucleus	60.36	78.08
TraesCS3A01G122200.1	Wheat	nucleus	77.59	77.7
TraesCS3B01G141400.2	Wheat	nucleus, plastid	77.45	77.56
TraesCS3D01G124100.1	Wheat	nucleus	77.17	77.28
HORVU3Hr1G022660.1	Barley	nucleus	76.89	77.11
Os08t0127300-01	Rice	cytosol	3.36	58.54
VIT_17s0000g01830.t01	Wine grape	nucleus	47.34	44.77
GSMUA_Achr8P01140_001	Banana	nucleus	46.78	44.47
VIT_14s0171g00380.t01	Wine grape	nucleus	45.24	43.83
Bra025262.1-P	Field mustard	nucleus	32.77	43.25
GSMUA_Achr8P08920_001	Banana	nucleus	39.08	42.92
Bra038624.1-P	Field mustard	nucleus	14.43	42.56
KRH63729	Soybean	nucleus	46.22	42.15
KRH57199	Soybean	nucleus	43.42	41.95
KRH07021	Soybean	nucleus	43.7	41.94
KRG94435	Soybean	nucleus	43.0	41.37
Solyc03g111090.2.1	Tomato	nucleus	45.1	41.23
CDY20057	Canola	nucleus	36.97	40.93
PGSC0003DMT400039290	Potato	nucleus	44.96	40.84
KRH54219	Soybean	nucleus	44.82	40.61
Bra039088.1-P	Field mustard	nucleus	36.97	40.55
GSMUA_Achr2P20970_001	Banana	nucleus	40.2	39.86
GSMUA_Achr10P...	Banana	nucleus	35.43	39.66
GSMUA_Achr3P02660_001	Banana	plasma membrane	36.27	39.6
PGSC0003DMT400052108	Potato	nucleus	39.78	38.96
CDY13699	Canola	nucleus	24.65	38.51
Solyc02g093880.2.1	Tomato	nucleus	39.08	38.48
AT3G01770.1	Thale cress	nucleus	33.19	38.23
AT5G14270.2	Thale cress	nucleus	35.99	37.3
KRH07022	Soybean	nucleus	40.48	36.77
GSMUA_Achr3P02670_001	Banana	nucleus	35.57	36.03
CDX83673	Canola	nucleus	24.93	35.74
AT3G27260.3	Thale cress	nucleus	39.08	33.94
CDX84396	Canola	nucleus	28.71	33.44
Os07t0507700-01	Rice	nucleus	22.69	26.96
Os04t0622800-00	Rice	cytosol	11.62	26.69
Os08t0192800-01	Rice	nucleus	17.79	26.4
AT5G63320.1	Thale cress	nucleus	39.22	26.39
Os04t0623100-01	Rice	cytosol, mitochondrion, nucleus, plastid	16.81	26.32
Os01t0648700-01	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	8.68	26.05
CDY48139	Canola	nucleus	30.81	24.89
Os06t0138000-01	Rice	cytosol, nucleus	3.92	22.58
Os01t0214300-01	Rice	cytosol, nucleus	5.18	22.29
CDY16729	Canola	nucleus	32.49	20.32
Os02t0250300-01	Rice	nucleus	18.35	19.97
Bra035848.1-P	Field mustard	nucleus	32.49	19.48

Protein Annotations

Gene3D:1.20.1270.220	Gene3D:1.20.920.10	MapMan:15.5.54	EntrezGene:4329897	ProteinID:BAD19337.1	ProteinID:BAD22163.1
ProteinID:BAF09267.1	ProteinID:BAS79618.1	InterPro:Bromodomain	InterPro:Bromodomain-like_sf	ncoils:Coil	ProteinID:EEE57320.1
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:GTE_bromo	InterPro:IPR001487	InterPro:IPR027353
InterPro:IPR036427	InterPro:IPR038336	InterPro:NET_dom	InterPro:NET_sf	EnsemblPlantsGene:Os02g0601800	EnsemblPlants:Os02t0601800-03
PFAM:PF00439	PFAM:PF17035	PRINTS:PR00503	PFscan:PS50014	PFscan:PS51525	PANTHER:PTHR22880
PANTHER:PTHR22880:SF231	UniProt:Q6K5G2	SMART:SM00297	SUPFAM:SSF47370	UniParc:UPI0000375820	RefSeq:XP_015625406.1
SEG:seg	:	:	:	:	:

Description

Bromodomain containing protein. (Os02t0601800-01);Similar to Kinase-like protein. (Os02t0601800-02);Bromodomain containing protein. (Os02t0601800-03);Similar to Kinase-like protein. (Os02t0601800-04)

Coordinates

chr2:-:23549175..23554380

Molecular Weight (calculated)

78634.6 Da

IEP (calculated)

4.841

GRAVY (calculated)

-0.818

Length

714 amino acids

Sequence
(BLAST)

001: MTPTVLMEFG QQRQIKRGYD EMAFRGMASA APRGYAETVG ESEGAAGSPV RVDSEDSSAP KRKCISLNSD GFDVKREIFV PAKMSSSERR HLRKRFRTEL
101: DSVRNLLKKP EFAVPVPVNR APALSSSAAP RGKKGQRGNH VVRGAKGRFL PTKPRPEAST VLTEDAIFKQ CDAILKKLMT QKCSNIFDSP VDAVKLNIPD
201: YFQIIKKPMD LGTIRNKLDS GSYTSPSEFA ADVRLTFSNA MTYNPRGHVV HDYAIQLNKM FESRWRTIEK KLASIATEAH VEVDRADSKR RKTPPVDCSE
301: VSTECVRPTE SVRPTESVKP KMTFEEKESF GNCLASLSED PEVPSHIIDL LQQCIDNNTD QLGDGEIEID IHAVSDDLLF ELKKHVDKYL QEREQSQQAK
401: SEPSENEAAN VSGLSHSSTN PCKGGDPVEE DVDICGNASP ILIEKDAHNN PNKCGSPSSS SSDSGSSSSD SESGSDSESE QEKGGSPGKP KGSKRSEQLV
501: EQEKSDVISP VDAIRPADDV ELREQDNESK PAPEGENSKP DRQVSPDKLL RAALLRSRYA DVIVKAQGIL SQGGDKQEEL EKLQKEEKAR LLAEGNAAME
601: ARRAEAEAEA KRKRDLEREK ARQALQEMER TVEINDNLHL KDLEMLGTAT TEHIVSSVDE TSPEHSQDGM PSFLPGSGNP LEQLGLFMKA DEEEEEEDPS
701: SVPSTKDAEE GEIN

Best Arabidopsis Sequence Match ( AT5G14270.2 )
(BLAST)

001: MTERNGGFPG DYCFEAPGGD YDEGSDSPRV SEGSNCSKRK VGETFGVSKM VLPLSGLSSS DRKELIRRLR QELEQIRVFQ KNFELSRTVA LTSSSASGLT
101: RVKSFGMSRC STGPGKTVNP ISAASKPTPV TTAVMLLMKQ CEALLKRLMS HQYGWVFNTP VDVVKLNILD YFNVIEHPMD LGTVKNKLTS GTYSCPSEFA
201: ADVRLTFSNA MTYNPPGNDV YVMADTLRKF FEVRWKTLEK KLSGTKVHTE PSNLDAHKEK HIVIPVPMAK KRKTTAVDCE NVVDPAKRVM TDEDRLKLGK
301: DLESLTEFPA QLINFLRDHN SNEGGIGDDE IEIDINDLSD HALFQLRDLL DEHLREIQNK KSSVEPCEIE LLHGSVPGNS SMQHCDGSEL DDEVVDIGEN
401: EHPTSSISPV TIEKDLVLGN SNGNSLGSVS GDPKMSSLPR ASKGLGTIDL EPMLDGATSA SPTRGLASVG GLDQLESASP EKISSVEADC QQDGNSAQNE
501: KQLPPEKSYR AAILKNRFAD IILKAREKPL NQNDTRDPEK LQREREELEL QKKKEKARLQ AEAKAAEEAR RKAEAQAAAE AAAEAKRKLE LEREAARQAL
601: MEMEQSVELN ENAKFLEDLE LLKTVDTDHL TNTIEEEDGP DVGLRSFSFG GSNPLEQLGL FMKQDEDEEE ADPLTSPAPE IDIEEGEID

Arabidopsis Description

BET9Bromodomain and extraterminal domain protein 9 [Source:UniProtKB/TrEMBL;Acc:F4K6Q7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.