CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
EES01931
EES05370
EES11006

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G01770.1	EES01931	AT3G48360.1	15316289
AT3G01770.1	EES05370	AT3G48360.1	15316289
AT3G01770.1	EES11006	AT3G48360.1	15316289
AT3G01770.1	EES01931	AT5G63160.1	15316289
AT3G01770.1	EES05370	AT5G63160.1	15316289
AT3G01770.1	EES11006	AT5G63160.1	15316289

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d017126_P001	Maize	nucleus	91.0	92.96
Os02t0601800-03	Rice	nucleus	81.72	81.37
TraesCS6D01G196600.3	Wheat	nucleus	77.92	78.81
TraesCS6A01G214000.1	Wheat	nucleus	78.06	78.61
TraesCS6B01G244000.2	Wheat	plastid	78.06	77.08
HORVU6Hr1G054560.16	Barley	nucleus	76.79	76.36
TraesCS3D01G087900.4	Wheat	nucleus	76.51	75.98
TraesCS3B01G103200.2	Wheat	nucleus	75.95	75.52
TraesCS3A01G087800.1	Wheat	plastid	64.14	74.75
HORVU3Hr1G015760.1	Barley	nucleus	57.95	74.64
TraesCS3A01G122200.1	Wheat	nucleus	73.7	73.49
TraesCS3D01G124100.1	Wheat	nucleus	73.42	73.21
TraesCS3B01G141400.2	Wheat	nucleus, plastid	73.28	73.07
HORVU3Hr1G022660.1	Barley	nucleus	72.86	72.75
VIT_17s0000g01830.t01	Wine grape	nucleus	46.41	43.71
GSMUA_Achr8P01140_001	Banana	nucleus	45.15	42.74
VIT_14s0171g00380.t01	Wine grape	nucleus	43.74	42.2
Bra025262.1-P	Field mustard	nucleus	31.65	41.59
GSMUA_Achr8P08920_001	Banana	nucleus	37.97	41.54
Bra038624.1-P	Field mustard	nucleus	13.92	40.91
KRH63729	Soybean	nucleus	44.87	40.74
KRH54219	Soybean	nucleus	44.44	40.1
KRH07021	Soybean	nucleus	41.91	40.05
KRG94435	Soybean	nucleus	41.35	39.62
Bra039088.1-P	Field mustard	nucleus	36.15	39.48
Solyc03g111090.2.1	Tomato	nucleus	43.32	39.44
KRH57199	Soybean	nucleus	40.79	39.24
CDY20057	Canola	nucleus	35.58	39.22
GSMUA_Achr10P...	Banana	nucleus	34.74	38.71
PGSC0003DMT400039290	Potato	nucleus	42.76	38.68
PGSC0003DMT400052108	Potato	nucleus	38.82	37.86
CDY13699	Canola	nucleus	24.19	37.64
GSMUA_Achr2P20970_001	Banana	nucleus	37.97	37.5
AT3G01770.1	Thale cress	nucleus	32.49	37.26
Solyc02g093880.2.1	Tomato	nucleus	37.83	37.1
GSMUA_Achr3P02660_001	Banana	plasma membrane	33.19	36.09
AT5G14270.2	Thale cress	nucleus	34.32	35.41
KXG24325	Sorghum	nucleus	34.88	35.03
KRH07022	Soybean	nucleus	38.54	34.86
CDX83673	Canola	nucleus	24.05	34.34
GSMUA_Achr3P02670_001	Banana	nucleus	32.77	33.05
AT3G27260.3	Thale cress	nucleus	37.69	32.6
CDX84396	Canola	nucleus	27.85	32.3
EER97261	Sorghum	nucleus	20.82	30.39
KXG33001	Sorghum	plastid	8.86	27.75
OQU82367	Sorghum	nucleus	11.25	26.49
AT5G63320.1	Thale cress	nucleus	37.55	25.16
KXG24660	Sorghum	plastid	17.3	25.0
EES09393	Sorghum	nucleus	21.24	24.96
CDY48139	Canola	nucleus	29.82	23.98
EER87804	Sorghum	nucleus	11.53	23.7
EES02258	Sorghum	plastid	14.35	22.87
CDY16729	Canola	nucleus	30.38	18.91
Bra035848.1-P	Field mustard	nucleus	30.38	18.14
OQU84709	Sorghum	nucleus	16.88	16.85
EES09391	Sorghum	cytosol, mitochondrion, nucleus	9.56	15.63

Protein Annotations

Gene3D:1.20.1270.220	Gene3D:1.20.920.10	MapMan:15.5.54	EntrezGene:8072149	InterPro:Bromodomain	InterPro:Bromodomain-like_sf
UniProt:C5XX56	ncoils:Coil	EnsemblPlants:EES07108	ProteinID:EES07108	ProteinID:EES07108.1	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:GTE_bromo	InterPro:IPR001487	InterPro:IPR027353	InterPro:IPR036427
InterPro:IPR038336	InterPro:NET_dom	InterPro:NET_sf	PFAM:PF00439	PFAM:PF17035	PRINTS:PR00503
PFscan:PS50014	PFscan:PS51525	PANTHER:PTHR22880	PANTHER:PTHR22880:SF231	SMART:SM00297	EnsemblPlantsGene:SORBI_3004G205600
SUPFAM:SSF47370	unigene:Sbi.3920	UniParc:UPI0001A85E41	RefSeq:XP_002454132.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr4:-:55669358..55674799

Molecular Weight (calculated)

78310.5 Da

IEP (calculated)

4.924

GRAVY (calculated)

-0.784

Length

711 amino acids

Sequence
(BLAST)

001: MTPTVLMEFG QHRPIKRGYE EMAFRGVAAA TSRGYTETVG ESEVAAGSPV RVDSEDSWAP KRKCISLNSD GFDVKREIFV PSKMSSSERR YLRKRFRAEL
101: DSVRDLLKKP EFAAPVPLSR APALSSSAAP RAKKPQKSQR GVTNVIRGAK GRFLPTKPRP EPTTVLSEAA VFKQCEAILK KLMTQKYSHI FNVPVDVDKL
201: QIPDYFDIVK TPMDLGTVQK KLESGSYTSP SDFAADVRLT FNNAMAYNPK GHAVHDMAIQ LNKMFESRWR PIEKKLASAA TEKHVEVDRA DSKRRKTPPV
301: DRSDVSTEGV RQTEPEKPKM TAEEREAFGN SLASISDELP PHIFELLQQC IDSNTDMPGD GEIEIDIQAV SDDMLFELKK HVDKYLQERE QSQQVKSEPS
401: ENEAVNVSGL SHSSTNPCKG GEPIEEDVDI CGNASPIMLD KDAQIRSSKC GSPSSSSSDS ESSSSDSDSG SDSESESEKV GSPGKLAKGT KKPDQLVEQE
501: KSDVISPADA NRPADIVGLH GEDSESKPAP GGENSKPDSQ VSPDRLLRAA LLRSRYADVI VKARGILSQG GDKQEELEKL QKEEKARLLA EGNAAMEARR
601: AEAEAEAKRK RDFEREKARQ ALQEMERTVE INDNLHIKDL EMLGTATTEH IVSSVDETSP ERSQDGMAGY HPGSVNPLEQ LGLFIKADDE EDDEEPSSVP
701: SIKEPEEGEI N

Best Arabidopsis Sequence Match ( AT5G14270.1 )
(BLAST)

001: MTERNGGFPG DYCFEAPGGD YDEGSDSPRV SEGSNCSKRK VGETFGVSKM VLPLSGLSSS DRKELIRRLR QELEQIRVFQ KNFELSRTVA LTSSSASGLT
101: RVKSFGMSRC STGPGKTVNP ISAASKPTPV TTAVMLLMKQ CEALLKRLMS HQYGWVFNTP VDVVKLNILD YFNVIEHPMD LGTVKNKLTS GTYSCPSEFA
201: ADVRLTFSNA MTYNPPGNDV YVMADTLRKF FEVRWKTLEK KLSGTKVHTE PSNLDAHKEK HIVIPVPMAK KRKTTAVDCE NVVDPAKRVM TDEDRLKLGK
301: DLESLTEFPA QLINFLRDHN SNEGGIGDDE IEIDINDLSD HALFQLRDLL DEHLREIQNK KSSVEPCEIE LLHGSVPGNS SMQHCDGSEL DDEVVDIGEN
401: EHPTSSISPV TIEKDLVLGN SNGNSLGSVS GDPKMSSLPR ASKGLGTIDL EPMLDGATSA SPTRGSSVGG LDQLESASPE KISSVEADCQ QDGNSAQNEK
501: QLPPEKSYRA AILKNRFADI ILKAREKPLN QNDTRDPEKL QREREELELQ KKKEKARLQA EAKAAEEARR KAEAQAAAEA AAEAKRKLEL EREAARQALM
601: EMEQSVELNE NAKFLEDLEL LKTVDTDHLT NTIEEEDGPD VGLRSFSFGG SNPLEQLGLF MKQDEDEEEA DPLTSPAPEI DIEEGEID

Arabidopsis Description

BET9Bromodomain and extraterminal domain protein 9 [Source:UniProtKB/TrEMBL;Acc:F4K6Q7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.