Factsheet for Bra035848.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
plastid 1
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
EpiLoc:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY16729	Canola	nucleus	95.55	99.65
Bra038624.1-P	Field mustard	nucleus	17.04	83.88
AT5G63320.1	Thale cress	nucleus	46.68	52.4
Bra025262.1-P	Field mustard	nucleus	21.07	46.4
VIT_17s0000g01830.t01	Wine grape	nucleus	26.87	42.38
Solyc03g111090.2.1	Tomato	nucleus	26.11	39.82
KRH57199	Soybean	nucleus	24.6	39.65
KRH54219	Soybean	nucleus	25.78	38.96
KRH63729	Soybean	nucleus	25.61	38.95
PGSC0003DMT400039290	Potato	nucleus	25.69	38.93
GSMUA_Achr8P01140_001	Banana	nucleus	23.59	37.42
TraesCS3A01G087800.1	Wheat	plastid	18.98	37.05
Bra039088.1-P	Field mustard	nucleus	19.82	36.25
GSMUA_Achr8P08920_001	Banana	nucleus	19.73	36.15
KXG24325	Sorghum	nucleus	21.16	35.59
GSMUA_Achr10P...	Banana	nucleus	18.89	35.27
GSMUA_Achr2P20970_001	Banana	nucleus	20.15	33.33
TraesCS7D01G309100.1	Wheat	nucleus	20.91	33.2
TraesCS6A01G214000.1	Wheat	nucleus	19.56	33.0
Zm00001d035167_P001	Maize	nucleus	20.99	32.98
TraesCS7A01G312700.2	Wheat	nucleus	20.74	32.93
TraesCS6D01G196600.3	Wheat	nucleus	19.4	32.86
TraesCS7B01G212400.2	Wheat	nucleus	20.65	32.8
Os02t0601800-03	Rice	nucleus	19.48	32.49
TraesCS6B01G244000.2	Wheat	plastid	19.4	32.08
HORVU6Hr1G054560.16	Barley	nucleus	19.14	31.89
HORVU7Hr1G074620.7	Barley	cytosol, mitochondrion, nucleus	20.82	31.84
TraesCS3D01G087900.4	Wheat	nucleus	18.98	31.56
TraesCS3B01G103200.2	Wheat	nucleus	18.81	31.33
TraesCS3B01G141400.2	Wheat	nucleus, plastid	18.39	30.72
Zm00001d049638_P009	Maize	nucleus	19.98	30.63
TraesCS3D01G124100.1	Wheat	nucleus	18.3	30.57
TraesCS3A01G122200.1	Wheat	nucleus	18.22	30.43
EES07108	Sorghum	nucleus	18.14	30.38
Zm00001d017126_P001	Maize	nucleus	17.63	30.17
HORVU3Hr1G022660.1	Barley	nucleus	17.97	30.06
GSMUA_Achr3P02660_001	Banana	plasma membrane	15.95	29.05
GSMUA_Achr3P02670_001	Banana	nucleus	16.54	27.94
Bra022044.1-P	Field mustard	nucleus	12.09	27.43
HORVU3Hr1G015760.1	Barley	nucleus	12.43	26.81
Bra025948.1-P	Field mustard	mitochondrion	8.56	24.64
Bra008074.1-P	Field mustard	nucleus, plastid	7.72	23.47
Bra031004.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	6.72	22.54
Bra016586.1-P	Field mustard	nucleus, plastid	8.31	22.5
Bra024402.1-P	Field mustard	nucleus, plastid	9.4	20.55
Bra005311.1-P	Field mustard	cytosol, plastid	3.95	20.17
Bra006068.1-P	Field mustard	nucleus	9.24	20.04
Bra005383.1-P	Field mustard	nucleus	5.71	17.66
Bra032431.1-P	Field mustard	nucleus	9.74	17.66
Bra030643.1-P	Field mustard	nucleus	9.66	15.56
Bra012810.1-P	Field mustard	cytosol	4.53	15.17
Bra015485.1-P	Field mustard	nucleus	9.49	15.09
Bra034451.1-P	Field mustard	cytosol	4.95	11.17

Protein Annotations

KEGG:00230+2.7.4.6	KEGG:00240+2.7.4.6	KEGG:00983+2.7.4.6	Gene3D:1.20.1270.220	Gene3D:1.20.920.10	MapMan:15.5.54
Gene3D:3.30.70.141	MapMan:6.3.2.4	EnsemblPlantsGene:Bra035848	EnsemblPlants:Bra035848.1	EnsemblPlants:Bra035848.1-P	InterPro:Bromodomain
InterPro:Bromodomain-like_sf	ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0004550	GO:GO:0005488
GO:GO:0005515	GO:GO:0006139	GO:GO:0006165	GO:GO:0006183	GO:GO:0006228	GO:GO:0006241
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
InterPro:GTE_bromo	InterPro:IPR001487	InterPro:IPR027353	InterPro:IPR036427	InterPro:IPR036850	InterPro:IPR038336
UniProt:M4F448	HAMAP:MF_00451	InterPro:NDK-like_dom	InterPro:NDK-like_dom_sf	InterPro:NET_dom	InterPro:NET_sf
InterPro:Nucleoside_diP_kinase	InterPro:Nucleoside_diP_kinase_AS	PFAM:PF00334	PFAM:PF00439	PFAM:PF17035	PRINTS:PR00503
PRINTS:PR01243	ScanProsite:PS00469	PFscan:PS50014	PFscan:PS51525	PANTHER:PTHR22880	PANTHER:PTHR22880:SF228
SMART:SM00297	SMART:SM00562	SUPFAM:SSF47370	SUPFAM:SSF54919	UniParc:UPI0002541A55	SEG:seg

Description

AT5G63320 (E=2e-203) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: ATBET9 (Arabidopsis thaliana Bromodomain and Extraterminal Domain protein 9); DNA binding (TAIR:AT5G14270.1); Has 44558 Blast hits to 24285 proteins in 1236 species: Archae - 185; Bacteria - 3450; Metazoa - 19774; Fungi - 4003; Plants - 1404; Viruses - 349; Other Eukaryotes - 15393 (source: NCBI BLink).

Coordinates

chrA09:-:3315167..3321018

Molecular Weight (calculated)

133855.0 Da

IEP (calculated)

4.193

GRAVY (calculated)

-0.838

Length

1191 amino acids

Sequence
(BLAST)

0001: MKECQTLVDR LWSHKLGFPF RIPVDPVLLN IPDYFTVIKH PMDLGTIRSR LRNGEYSSPL DFAADVRLTF SNSMAYNPPG NQYHKMARDL SAYFESRWKT
0101: IEKKIPVMEP PVTYLTSSAS LESEVPYNVP PPRKNTASVN ESKLRVEPPK LVMTDDEKKK LSQDLDALEE FPQNIVDLLK EQIGNDDLSG EVEIEIDIET
0201: LSDETLFMVR KLLDDYLKDR KKSQEKSEHC EMEIAHDSGF SNSTLQPSKG DLLIDEDVDI IGGNDPPVSS HPPHKIEKDD ACRNNECSSS SSSSRESGSS
0301: SSDSDSCSSS RSETDFTKAS NPTSTEEPGV DINGEKIVVN DSLNESCQVE HDVREKSTSM AALNVLTEEE TAPLERQDSP GKRQRAALLK NRFADTIMKA
0401: REKTLTKGEK GDPEKLRIER EKFEKRLREE NLRLQAEAKA VEEARRKAKA EAAEKARRER EQEREAARQA LQKLEKTVEI DEGRRFMEDL EMLRATGAEG
0501: DQLPTFMEEM SPKCSPDMLG SFKMEGNSNP LEQLGLYMKM DEDEDDEEDE PHFRQGEVDE QTLDRKERFT LSPHGVERED QLDNGNKKPA SQKAQDNGNQ
0601: EDEKFINQKE GEEQIENGPV SLHGEEGEDR VGSGSEGREE VVSEKAQDSV NHEDEELINQ NEGGREQLEI VPEQEIGVED KGDEEAGIVD MVGVETEVVE
0701: MVKVDTEEVD TREQETEVVG NGEKETEVGG MGEQDNGIED KGDEEAEMYN KDEEAGIVDM EGKETEVVDM VKVETEVVDM REQETEVVDM VKVENEIGGM
0801: GEQDNGIEYK GDEEVEVVDN KDEEAGIVDM GEEETEGVDM VKEVETEGVD MREQEETEAV DNVEKETEVV VMGKKENEIG GIREEETEVV HKREEETEVV
0901: ENGEEETEVV DMGDEETEVV QTREEEEVVG KGQEGNRVIN DSLSQYFWID PEVSETVREA EGNKMAVVGQ WTLCVASPRL TPAICSSTSS PTTVNLRAEL
1001: AAFRPQFRLF SRTSPSRRRL RASTSSAESG IFLPHLVASM EQVEETYIMV KPDGIQRGLV GEIISRFEKK GFKLIGLKMF QCPRELAEEH YKDLSSKSFF
1101: SSLIEYITSG PVVCMAWEGV GVVASARKMI GKTDPLQAEP GTIRGDLAVQ TGRNIVHGSD SPENGKREIA LWFKEGELCE WDSVLAKWLR E

Best Arabidopsis Sequence Match ( AT5G63320.1 )
(BLAST)

0001: MGKARKHSRG RPSGFVPDYM QAVEPDEFVY SERMNSEASP PLKRRRFGLN GDNNGVSKEV LSLSKMSRSE RKNLVHKLKM ELQQVRDLSK KIASFSSDTV
0101: LLSPYNDHSC SDGPRRPPPE NFATFVGSQG KKRPPVRSDK QRNKKGPSRL NVPTSYTVAS VMKECETLLN RLWSHKSGWP FRTPVDPVML NIPDYFNVIK
0201: HPMDLGTIRS RLCKGEYSSP LDFAADVRLT FSNSIAYNPP GNQFHTMAQG ISKYFESGWK SIEKKIPMSK PPVIPLTSSA SLESEIPFEV APMRKKEAAM
0301: NDNKLRVEPA KLVMTDGEKK KLGQDLMALE EDFPQKIADL LREQSGSDGQ SGEGEIEIDI EALSDEILFM VRKLLDDYLR EKKKSMEKSE PCEMEIVHDS
0401: GFSNSPLQPS KGDLQIDEDV DIVGGNDPSV SSHPPLKIEK DAACRNNESS SSSSSSSESG SSSSDSDSCS SSGSETDSIK ASKPTSREEK KQPGVGIDKK
0501: EDDSNSEKIV VNDSLNELDQ LEHTVGEKST TMDAVVLVPD EETAPPERQI SPDSPDKRYR AAFLKNRFAD TIMKAREKAF TKGEKGDPEK LRIEREEFEK
0601: RLREEKERLQ AEAKAAEEAR RKAKAEAAEK ARREREQERE AARQALQKME KTVEINEGIR FMEDLQMLRA TGTEGDQLPT SMEVMSPKFS EDMLGLGSFK
0701: MESNSNPLEH LGLYMKMDED EDEEEDPPHF SQRKVEDNPF DRSEKQEHSP HRVEGEDQLV SGNEEPVSQE AHDNGDQEDG KPINPNEIER QLENMPEQES
0801: GVGDKEEQET EVVDMRKQEN EVVDMGVEEV HPLDRSEGRT LSPHRKERED PRASGNEESV SEKAQDYENQ RDEKINQSER EEQLENVLEQ ESSRDDDTGE
0901: QETEVVGVGK ELSLDKSEGQ TLSPHREEGE NQLDCGNEEL VSQKTQDNGN QEDEKSINKI EGEEQLANVP EQESRVTEKE EQETGVVDLG EQKSEVVEKG
1001: VEENEAVDNG EGVQGTEVSD KGGNETVVDG NGKVETEVVD KAGQKTDLVD QGEEDIDVEI D

Arabidopsis Description

GTE10NPX1 [Source:UniProtKB/TrEMBL;Acc:A0A178UIE5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.