Factsheet for Bra032431.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY06203	Canola	nucleus	95.59	97.52
CDY09981	Canola	nucleus	89.35	91.86
Bra015485.1-P	Field mustard	nucleus	84.63	74.23
Bra030643.1-P	Field mustard	nucleus	81.28	72.26
AT1G06230.2	Thale cress	nucleus	82.65	70.89
KRH22304	Soybean	nucleus	50.23	51.56
KRH27020	Soybean	nucleus	50.53	51.39
Solyc10g008070.2.1	Tomato	nucleus	27.25	49.45
PGSC0003DMT400027387	Potato	nucleus	42.31	48.26
VIT_12s0028g02510.t01	Wine grape	nucleus	47.79	48.01
GSMUA_Achr10P...	Banana	nucleus, plastid	32.57	47.87
GSMUA_Achr11P...	Banana	nucleus	29.07	45.15
GSMUA_Achr7P09350_001	Banana	nucleus, plastid	34.4	43.97
Zm00001d008922_P001	Maize	plastid	32.72	43.88
Bra025948.1-P	Field mustard	mitochondrion	26.48	42.03
TraesCS3D01G146600.1	Wheat	nucleus, plastid	32.27	41.9
TraesCS3B01G164100.1	Wheat	nucleus, plastid	32.42	41.76
TraesCS3A01G140500.1	Wheat	nucleus, plastid	32.27	41.57
Bra008074.1-P	Field mustard	nucleus, plastid	24.66	41.33
EES02258	Sorghum	plastid	28.01	41.26
Os01t0214300-01	Rice	cytosol, nucleus	10.2	40.36
GSMUA_Achr1P11660_001	Banana	nucleus	31.35	40.16
Os02t0250300-01	Rice	nucleus	39.27	39.33
KRH25703	Soybean	nucleus	52.21	39.24
Bra016586.1-P	Field mustard	nucleus, plastid	26.03	38.86
Zm00001d016131_P006	Maize	nucleus	38.51	37.7
HORVU6Hr1G045030.1	Barley	nucleus	35.92	37.28
HORVU6Hr1G045070.4	Barley	nucleus	36.07	37.26
TraesCS6D01G177700.1	Wheat	cytosol, plastid	35.46	36.69
OQU84709	Sorghum	nucleus	39.73	36.66
Bra031004.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	19.63	36.34
KRH55813	Soybean	nucleus	52.21	34.82
Zm00001d053427_P007	Maize	nucleus	33.49	32.21
Bra038624.1-P	Field mustard	nucleus	11.57	31.41
Bra005311.1-P	Field mustard	cytosol, plastid	10.81	30.47
Bra024402.1-P	Field mustard	nucleus, plastid	24.66	29.72
Bra006068.1-P	Field mustard	nucleus	24.05	28.78
Bra012810.1-P	Field mustard	cytosol	11.72	21.63
Zm00001d039369_P004	Maize	plastid	30.59	21.45
Bra005383.1-P	Field mustard	nucleus	12.33	21.04
Bra025262.1-P	Field mustard	nucleus	15.37	18.67
Bra039088.1-P	Field mustard	nucleus	17.81	17.97
Bra022044.1-P	Field mustard	nucleus	13.85	17.33
Bra034451.1-P	Field mustard	cytosol	11.87	14.77
Bra035848.1-P	Field mustard	nucleus	17.66	9.74

Protein Annotations

Gene3D:1.20.1270.220	Gene3D:1.20.920.10	MapMan:15.5.54	EnsemblPlantsGene:Bra032431	EnsemblPlants:Bra032431.1	EnsemblPlants:Bra032431.1-P
InterPro:Bromodomain	InterPro:Bromodomain-like_sf	ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:GTE_bromo	InterPro:IPR001487	InterPro:IPR027353	InterPro:IPR036427	InterPro:IPR038336	UniProt:M4EUE9
InterPro:NET_dom	InterPro:NET_sf	PFAM:PF00439	PFAM:PF17035	PRINTS:PR00503	PFscan:PS50014
PFscan:PS51525	PANTHER:PTHR22880	PANTHER:PTHR22880:SF147	SMART:SM00297	SUPFAM:SSF47370	UniParc:UPI00025434CB
SEG:seg	:	:	:	:	:

Description

AT1G06230 (E=3e-223) GTE4 | GTE4 (GLOBAL TRANSCRIPTION FACTOR GROUP E 4); DNA binding

Coordinates

chrA09:-:36030210..36032456

Molecular Weight (calculated)

72980.5 Da

IEP (calculated)

6.739

GRAVY (calculated)

-0.841

Length

657 amino acids

Sequence
(BLAST)

001: MASEPVNGDG AREKKQSIRV YTRKGKGQRK HSPYFAFDGG DKPENNHVSP PETLARESLD PLHEARATAP DARAILDDVN TVVVDENSIK ELPKSLSLED
101: ATTMVVDKKA IEAPSEDVVD KNLIEVSSED EEYVHEDHLI KETHPENAAA ESVPMEEDVD GRIRIHVASK SKQQKEEIRK RLEDQLNVVR GLVKKIEDKE
201: GEINDSPLTN GGGRILSGFA SAGLPREVIR VPRALNQLSI SVLENTQGVN DYVEKEKRTP KANQFYRTSE FLLGDKLPPA ESNKKSKSSS KKYGGEAGHG
301: FGAGSKVFKN CSALLERLMK HKHGWVFNTP VDVKGLGLHD YFTIIEHPMD LGTVKSTLTN NMYKSPREFA EDVRLTFHNA MTYNPPGQDV HIMAQVLLQM
401: FEERWAVIES DYNREMRFVT AYEMNLPAST MRSRLGPTMP PPPINVRNST MDWSSRPADV QHPKPNTTTP GRTPTSARTP ALKKPKANEP NKRDMTYEEK
501: QKLSGHLQNL PPDKLDAIVQ IVNRRNTAVN LKDEEIEVDI DSVDPETLWE LDRFVINYKK GLSKKKRKAE LAMQARAEAE RNGQQQMAPA PVAREFSREG
601: GNTAKKTLPT SLPSQVEKQN NEPSRSSSSS SSSSGSSSSS SDSDSDSSSS SSGSDQT

Best Arabidopsis Sequence Match ( AT1G06230.2 )
(BLAST)

001: MASEPVNGGE GIDGAREKQI IKVYKRKGKG QRKQSSFFAL EAAIEKPEGL LENENDNNDV SPAETLAPEF EDPIVVVKNS IEEAALGTNS HGDKNLTEAP
101: SENLPGDDSD KVIDKPLVEA FSQAQPQDDA SLAAMDKSEE VPSQIPKAQD DVNTVVVDEN SIKEPPKSLA QEDVTTVIVD KNPIEAPSQT LSLEDGDTLV
201: VDKNPIEVSS EEDVHVIDAD NLIKEAHPEN FVERDTTDAQ QPAGLTSDSA HATAAGSMPM EEDADGRIRI HVASTTKQQK EEIRKKLEDQ LNVVRGMVKK
301: IEDKEGEIGA YNDSRVLINT GINNGGGRIL SGFASAGLPR EVIRAPRPVN QLSISVLENT QGVNEHVEKE KRTPKANQFY RNSEFLLGDK LPPAESNKKS
401: KSSSKKQGGD VGHGFGAGTK VFKNCSALLE RLMKHKHGWV FNAPVDVKGL GLLDYYTIIE HPMDLGTIKS ALMKNLYKSP REFAEDVRLT FHNAMTYNPE
501: GQDVHLMAVT LLQIFEERWA VIEADYNREM RFVTGYEMNL PTPTMRSRLG PTMPPPPINV RNTIDRADWS NRQPTTTPGR TPTSATPSGR TPALKKPKAN
601: EPNKRDMTYE EKQKLSGHLQ NLPPDKLDAI VQIVNKRNTA VKLRDEEIEV DIDSVDPETL WELDRFVTNY KKGLSKKKRK AELAIQARAE AERNSQQQMA
701: PAPAAHEFSR EGGNTAKKTL PTPLPSQVEK QNNETSRSSS SSSSSSSSSS SDSDSDSSSS SGSDQT

Arabidopsis Description

GTE4Transcription factor GTE4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNC4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.