Factsheet for TraesCS3B01G164100.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 3
cytosol 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G146600.1	Wheat	nucleus, plastid	98.43	99.21
TraesCS3A01G140500.1	Wheat	nucleus, plastid	98.82	98.82
Zm00001d008922_P001	Maize	plastid	75.88	78.98
EES02258	Sorghum	plastid	67.06	76.68
Os01t0214300-01	Rice	cytosol, nucleus	24.71	75.9
CDY15568	Canola	nucleus	33.92	54.57
CDY66497	Canola	nucleus	15.69	51.61
CDX96751	Canola	nucleus, plastid	32.75	45.63
CDX83890	Canola	nucleus, plastid	32.75	45.63
CDY19175	Canola	nucleus, plastid	33.53	44.53
CDY26219	Canola	nucleus	15.88	43.55
CDY48040	Canola	nucleus, plastid	33.14	43.11
Bra008074.1-P	Field mustard	nucleus, plastid	33.14	43.11
CDX82101	Canola	nucleus	15.1	42.08
CDX82103	Canola	plastid	25.69	41.85
Bra025948.1-P	Field mustard	mitochondrion	33.92	41.79
CDY26215	Canola	mitochondrion	33.73	41.55
AT1G73150.1	Thale cress	plastid	37.45	41.43
Bra016586.1-P	Field mustard	nucleus, plastid	34.9	40.45
GSMUA_Achr1P11660_001	Banana	nucleus	40.59	40.35
PGSC0003DMT400027387	Potato	nucleus	44.31	39.24
Bra031004.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	27.25	39.15
VIT_19s0014g01650.t01	Wine grape	nucleus	45.69	39.03
AT1G17790.1	Thale cress	nucleus, plastid	37.25	39.01
Zm00001d039369_P004	Maize	plastid	70.59	38.42
Solyc10g008070.2.1	Tomato	nucleus	27.25	38.4
KRH27020	Soybean	nucleus	47.65	37.62
KRH22304	Soybean	nucleus	46.67	37.19
VIT_12s0028g02510.t01	Wine grape	nucleus	47.06	36.7
PGSC0003DMT400061991	Potato	cytoskeleton, cytosol, nucleus	22.16	36.33
CDY21732	Canola	cytosol	17.84	35.83
TraesCS3B01G265200.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	14.71	34.88
TraesCS3B01G265300.1	Wheat	cytosol, nucleus, plastid	14.51	33.64
CDY06203	Canola	nucleus	41.76	33.07
CDY09981	Canola	nucleus	40.98	32.71
Bra032431.1-P	Field mustard	nucleus	41.76	32.42
TraesCS2B01G489500.1	Wheat	plastid	28.43	31.32
TraesCS5B01G052900.1	Wheat	plastid	14.51	31.09
Solyc12g014170.1.1	Tomato	nucleus	41.37	30.1
CDX86532	Canola	nucleus	41.37	29.93
PGSC0003DMT400039787	Potato	nucleus	41.18	29.83
PGSC0003DMT400032373	Potato	nucleus	42.75	29.42
Bra030643.1-P	Field mustard	nucleus	41.96	28.96
Bra015485.1-P	Field mustard	nucleus	41.96	28.57
CDX81848	Canola	cytosol, nucleus, plastid	15.1	28.0
Solyc07g062660.2.1	Tomato	nucleus	40.59	27.53
AT1G06230.2	Thale cress	nucleus	40.78	27.15
KRH25703	Soybean	nucleus	45.88	26.77
KRH55813	Soybean	nucleus	45.1	23.35
TraesCS1B01G385900.1	Wheat	cytosol	15.49	23.1
CDY72432	Canola	cytosol	20.78	20.99
CDY68605	Canola	cytosol	21.96	20.4
TraesCS3B01G141400.2	Wheat	nucleus, plastid	22.94	16.41
TraesCS7B01G212400.2	Wheat	nucleus	23.92	16.27
TraesCS7B01G461100.3	Wheat	nucleus, plastid	17.25	16.09
TraesCS3B01G103200.2	Wheat	nucleus	22.55	16.08
TraesCS6B01G244000.2	Wheat	plastid	22.55	15.97

Protein Annotations

Gene3D:1.20.1270.220	Gene3D:1.20.920.10	MapMan:15.5.54	InterPro:Bromodomain	InterPro:Bromodomain-like_sf	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:GTE_bromo	InterPro:IPR001487	InterPro:IPR027353	InterPro:IPR036427
InterPro:IPR038336	InterPro:NET_dom	InterPro:NET_sf	PFAM:PF00439	PFAM:PF17035	PRINTS:PR00503
PFscan:PS50014	PFscan:PS51525	PANTHER:PTHR22880	PANTHER:PTHR22880:SF181	SMART:SM00297	SUPFAM:SSF47370
EnsemblPlantsGene:TraesCS3B01G164100	EnsemblPlants:TraesCS3B01G164100.1	TIGR:cd05506	SEG:seg	:	:

Description

No Description!

Coordinates

chr3B:-:161642491..161644388

Molecular Weight (calculated)

56362.7 Da

IEP (calculated)

7.647

GRAVY (calculated)

-0.907

Length

510 amino acids

Sequence
(BLAST)

001: MTSGPPSPSG KAYSRKSHGP GPKSSKARSF DAHNGPLIPT VTFSLPSTPA TRRELRRRLS AELAQVRAAY KRISSLPAPA PSSALSATDP STPLPPHPSV
101: SKHKSKKGPP NPSGSAEARR KLYAPVFRSC AVVLARLMKH KHGWVFNVPV DASALGLHDY HTIITKPMDL GTVKSRLAAG HYKSPREFAT EVRLTFQNAM
201: KYNPKGQDVY FMAEQLLNMF EEKWPEIEAE MAQLSPQPHT PSSAPPKKQK QREREREREM DNARVLERSD STAHAAALEA PPKPHTGTAR PPVLKKPKAR
301: DPNKREMTFW EKQRLSNDLQ DLPAEKLDNV VQIIKKRNSS LNQHDDEIEV DIDSFDVETL WELDRFVTNY KKSITKNKRK AELSVVRQDE SDHEPDLEKI
401: EHARHDEGEQ DQMRTVHNTI PEPEAVDVVD VVDVEPPMVE AEPHKEIAAD DNGRYMGSSS PAHLEDQKGD NVGRSSSSGS SSSESGSSSS DTDSDSSSAD
501: GSDAAQSPKS

Best Arabidopsis Sequence Match ( AT1G06230.2 )
(BLAST)

001: MASEPVNGGE GIDGAREKQI IKVYKRKGKG QRKQSSFFAL EAAIEKPEGL LENENDNNDV SPAETLAPEF EDPIVVVKNS IEEAALGTNS HGDKNLTEAP
101: SENLPGDDSD KVIDKPLVEA FSQAQPQDDA SLAAMDKSEE VPSQIPKAQD DVNTVVVDEN SIKEPPKSLA QEDVTTVIVD KNPIEAPSQT LSLEDGDTLV
201: VDKNPIEVSS EEDVHVIDAD NLIKEAHPEN FVERDTTDAQ QPAGLTSDSA HATAAGSMPM EEDADGRIRI HVASTTKQQK EEIRKKLEDQ LNVVRGMVKK
301: IEDKEGEIGA YNDSRVLINT GINNGGGRIL SGFASAGLPR EVIRAPRPVN QLSISVLENT QGVNEHVEKE KRTPKANQFY RNSEFLLGDK LPPAESNKKS
401: KSSSKKQGGD VGHGFGAGTK VFKNCSALLE RLMKHKHGWV FNAPVDVKGL GLLDYYTIIE HPMDLGTIKS ALMKNLYKSP REFAEDVRLT FHNAMTYNPE
501: GQDVHLMAVT LLQIFEERWA VIEADYNREM RFVTGYEMNL PTPTMRSRLG PTMPPPPINV RNTIDRADWS NRQPTTTPGR TPTSATPSGR TPALKKPKAN
601: EPNKRDMTYE EKQKLSGHLQ NLPPDKLDAI VQIVNKRNTA VKLRDEEIEV DIDSVDPETL WELDRFVTNY KKGLSKKKRK AELAIQARAE AERNSQQQMA
701: PAPAAHEFSR EGGNTAKKTL PTPLPSQVEK QNNETSRSSS SSSSSSSSSS SDSDSDSSSS SGSDQT

Arabidopsis Description

GTE4Transcription factor GTE4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNC4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.