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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, plastid, cytosol, plasma membrane, golgi, nucleus

Predictor Summary:
  • plastid 2
  • cytosol 1
  • mitochondrion 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, nucleus, plastid, secretory
Any Predictor:cytosol, mitochondrion, nucleus, plastid, secretory
iPSORT:plastid
MultiLoc:cytosol
PProwler:mitochondrion
TargetP:secretory
WoLF PSORT:plastid
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3D01G235000.1 Wheat cytosol, nucleus, plastid 93.49 93.06
TraesCS3A01G234100.1 Wheat cytosol, nucleus, plastid 92.56 92.56
TraesCS3A01G234600.1 Wheat cytosol, nucleus, plastid 92.09 92.09
TraesCS3B01G265300.1 Wheat cytosol, nucleus, plastid 84.65 82.73
TraesCS5B01G052900.1 Wheat plastid 85.58 77.31
Os01t0648700-01 Rice cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole 53.02 47.9
KXG33001 Sorghum plastid 45.58 43.17
TraesCS3B01G164100.1 Wheat nucleus, plastid 34.88 14.71
TraesCS1B01G385900.1 Wheat cytosol 22.79 14.33
TraesCS2B01G489500.1 Wheat plastid 29.3 13.61
TraesCS7B01G461100.3 Wheat nucleus, plastid 23.72 9.32
TraesCS3B01G141400.2 Wheat nucleus, plastid 28.37 8.56
TraesCS6B01G244000.2 Wheat plastid 26.98 8.06
TraesCS3B01G103200.2 Wheat nucleus 26.51 7.97
TraesCS7B01G212400.2 Wheat nucleus 27.44 7.87
Protein Annotations
EnsemblPlants:TraesCS3B01G265200.1EnsemblPlantsGene:TraesCS3B01G265200Gene3D:1.20.920.10GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:BromodomainInterPro:Bromodomain-like_sfInterPro:IPR001487InterPro:IPR036427PANTHER:PTHR22880PANTHER:PTHR22880:SF147
PFAM:PF00439PFscan:PS50014PRINTS:PR00503SMART:SM00297SUPFAM:SSF47370MapMan:15.5.54
Description
No Description!
Coordinates
chr3B:+:424738846..424740947
Molecular Weight (calculated)
24055.0 Da
IEP (calculated)
5.413
GRAVY (calculated)
-0.227
Length
215 amino acids
Sequence
(BLAST)
001: MSSQSSPAGA LPGFPKPMCY LAAADLPRAL ERCRMLLDKL LQHEDGWVFA KPVDTYELGL RDYHSIIAEP MDLGTVSRRL ELRRYPNLLC FAKDVRRTFS
101: NAMTYNNKGD DVYESAAKLS RIFESGWASI LAALPSPSPV AMRRARLKDE LPRLPVDLQG KAVVIMNDIG GWIQEVDGRV EVDFDKADEA TLDKLEWLLA
201: LATMRKEAGA LDNQI
Best Arabidopsis Sequence Match ( AT1G73150.2 )
(BLAST)
001: MASGPIAGGG VSKTKHKWSD SGNKSQKRSK PTVANSNSLG LEDNHQMMKI SLSSISKLEV RNLKRKLQAE LEEVRSLIKR LEPQGNNFAP VPNKKLKTAN
101: GGKKGGVHGA AADKGTVQIL KSCNNLLTKL MKHKSGWIFN TPVDVVTLGL HDYHNIIKEP MDLGTVKTRL SKSLYKSPLE FAEDVRLTFN NAMLYNPVGH
201: DVYHMAEILL NLFEEKWVPL ETQYELLIRK QQPVRDIDFH APVSTNTHNV EALPLPAPTP SLSPPPPPKV VENRTLERAE SMTNPVKPAV LPVVPEKLVE
301: EASANRDLTF DEKRQLSEDL QDLPYDKLEA VVQIIKKRTP ELSQQDDEIE LDIDSLDLET LWELFRFVTE YKESLSKKKE EQGLDSERDA ESFHNSVHES
401: NTLVTGLESS KVTELGEILI LKIVSSSSIL VV
Arabidopsis Description
GTE3Transcription factor GTE3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9S7T1]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.