Factsheet for TraesCS2B01G489500.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 2
mitochondrion 3
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G466700.3	Wheat	cytosol, mitochondrion, nucleus, plastid	95.68	94.86
TraesCS2D01G466700.1	Wheat	cytosol, mitochondrion, nucleus, plastid	95.46	94.04
Zm00001d046528_P001	Maize	cytosol	23.97	74.0
OQU82367	Sorghum	nucleus	47.52	72.85
Os04t0622800-00	Rice	cytosol	46.87	69.77
Os04t0623100-01	Rice	cytosol, mitochondrion, nucleus, plastid	68.03	69.08
Zm00001d002267_P001	Maize	plastid	66.74	68.51
Zm00001d026333_P001	Maize	cytosol	64.79	63.69
CDY08771	Canola	nucleus	27.0	35.31
GSMUA_Achr1P15650_001	Banana	nucleus	36.72	34.55
KRH21702	Soybean	nucleus	39.09	34.09
GSMUA_Achr3P00480_001	Banana	nucleus	38.23	33.91
KRH10646	Soybean	nucleus	38.66	33.84
KRH10648	Soybean	nucleus	38.66	33.4
VIT_03s0097g00570.t01	Wine grape	nucleus	39.52	33.15
CDX70356	Canola	nucleus, plastid	16.63	31.17
CDY65645	Canola	nucleus, plastid	34.13	31.04
CDX78390	Canola	nucleus	15.98	30.96
CDY65656	Canola	cytosol	13.39	29.95
PGSC0003DMT400008041	Potato	nucleus	38.44	29.57
Bra024402.1-P	Field mustard	nucleus, plastid	34.77	29.54
TraesCS3B01G265200.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	13.61	29.3
Solyc01g106280.2.1	Tomato	nucleus	37.8	29.07
TraesCS3B01G164100.1	Wheat	nucleus, plastid	31.32	28.43
AT5G65630.1	Thale cress	nucleus	35.85	28.14
Bra005311.1-P	Field mustard	cytosol, plastid	14.04	27.9
AT5G10550.1	Thale cress	nucleus	34.13	27.19
TraesCS3B01G265300.1	Wheat	cytosol, nucleus, plastid	12.74	26.82
Bra006068.1-P	Field mustard	nucleus	31.75	26.78
PGSC0003DMT400078795	Potato	nucleus	32.83	25.68
Solyc02g091660.2.1	Tomato	nucleus	29.16	25.23
TraesCS5B01G052900.1	Wheat	plastid	12.74	24.79
CDX70357	Canola	plastid	18.36	21.63
TraesCS1B01G385900.1	Wheat	cytosol	14.69	19.88
TraesCS3B01G141400.2	Wheat	nucleus, plastid	26.78	17.39
TraesCS6B01G244000.2	Wheat	plastid	26.78	17.22
TraesCS3B01G103200.2	Wheat	nucleus	26.35	17.06
TraesCS7B01G212400.2	Wheat	nucleus	22.03	13.6
TraesCS7B01G461100.3	Wheat	nucleus, plastid	14.25	12.07

Protein Annotations

Gene3D:1.20.1270.220	Gene3D:1.20.920.10	MapMan:15.5.54	InterPro:Bromodomain	InterPro:Bromodomain-like_sf	ncoils:Coil
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001487	InterPro:IPR027353	InterPro:IPR036427
InterPro:IPR038336	InterPro:NET_dom	InterPro:NET_sf	PFAM:PF00439	PFAM:PF17035	PRINTS:PR00503
PFscan:PS50014	PFscan:PS51525	PANTHER:PTHR22880	PANTHER:PTHR22880:SF162	SMART:SM00297	SUPFAM:SSF47370
EnsemblPlantsGene:TraesCS2B01G489500	EnsemblPlants:TraesCS2B01G489500.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr2B:-:686818413..686820009

Molecular Weight (calculated)

50346.5 Da

IEP (calculated)

6.459

GRAVY (calculated)

-0.507

Length

463 amino acids

Sequence
(BLAST)

001: MASALIAGRR AQSHHWGDNR GPLAPAPSPN PGHRALPPAD SSRTHHPLAS PGVGYVTFRP SGLTHREAGA LRERLAGELG QVRALLSRID AWQLELEQQQ
101: QQPRRGQPRD DGLPAPPPKL RAAMRKRCAQ ILSKLRKDKR SIWFNAPVEV ETLGLHDYHA VIKSPMDLGT VKANLAARNY PSHDAFAADV RLTFSNALRY
201: NPAGHTVHTF AGDLLALFEK MYAAAVSWFE EECRRLPPPV PVPVPVSAEL PPPVVPLPAQ VKPRAVRMPK PKARELNKRQ MSLEEKNMLR AGLESLPEEK
301: MHSVLQIVRK RNVNNPELLG DEIELDIDEM DIETQWELDR FVNNFNKALK KSRRAAMING DIADVNNADG AGVVNGAVPI LVDHADVESE NPENTVVPEQ
401: VDEYVDIDDE MPTATYQSVE IEKGAEATSV SGGSGSGSSS SSGTGSGSSG DSASEAGDAR SLV

Best Arabidopsis Sequence Match ( AT1G73150.1 )
(BLAST)

001: MASGPIAGGG VSKTKHKWSD SGNKSQKRSK PTVANSNSLG LEDNHQMMKI SLSSISKLEV RNLKRKLQAE LEEVRSLIKR LEPQGNNFAP VPNKKLKTAN
101: GGKKGGVHGA AADKGTVQIL KSCNNLLTKL MKHKSGWIFN TPVDVVTLGL HDYHNIIKEP MDLGTVKTRL SKSLYKSPLE FAEDVRLTFN NAMLYNPVGH
201: DVYHMAEILL NLFEEKWVPL ETQYELLIRK QQPVRDIDFH APVSTNTHNV EALPLPAPTP SLSPPPPPKV VENRTLERAE SMTNPVKPAV LPVVPEKLVE
301: EASANRDLTF DEKRQLSEDL QDLPYDKLEA VVQIIKKRTP ELSQQDDEIE LDIDSLDLET LWELFRFVTE YKESLSKKKE EQGLDSERDA ESFHNSVHES
401: NTLVTGLESS KVTELGHVAS TVRQEVNVGG SSSSNSSSSG SGSGSSGSDS DSSGHESDTG N

Arabidopsis Description

GTE3Transcription factor GTE3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9S7T1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.