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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plastid, nucleus, cytosol

Predictor Summary:
  • mitochondrion 3
  • cytosol 1
  • plastid 1
  • nucleus 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2D01G466700.1 Wheat cytosol, mitochondrion, nucleus, plastid 96.36 95.74
TraesCS2B01G489500.1 Wheat plastid 94.86 95.68
Zm00001d046528_P001 Maize cytosol 24.41 76.0
OQU82367 Sorghum nucleus 47.54 73.51
Os04t0622800-00 Rice cytosol 46.25 69.45
Zm00001d002267_P001 Maize plastid 66.81 69.18
Os04t0623100-01 Rice cytosol, mitochondrion, nucleus, plastid 67.45 69.08
Zm00001d026333_P001 Maize cytosol 64.67 64.12
CDY08771 Canola nucleus 26.98 35.59
GSMUA_Achr1P15650_001 Banana nucleus 36.62 34.76
KRH21702 Soybean nucleus 39.4 34.65
KRH10646 Soybean nucleus 38.54 34.03
KRH10648 Soybean nucleus 38.97 33.96
GSMUA_Achr3P00480_001 Banana nucleus 37.9 33.91
VIT_03s0097g00570.t01 Wine grape nucleus 39.19 33.15
CDX70356 Canola nucleus, plastid 16.7 31.58
CDY65645 Canola nucleus, plastid 34.26 31.43
CDX78390 Canola nucleus 16.06 31.38
PGSC0003DMT400008041 Potato nucleus 38.97 30.23
Bra024402.1-P Field mustard nucleus, plastid 35.12 30.09
Solyc01g106280.2.1 Tomato nucleus 38.33 29.73
CDY65656 Canola cytosol 13.06 29.47
TraesCS3A01G234100.1 Wheat cytosol, nucleus, plastid 13.49 29.3
TraesCS3A01G234600.1 Wheat cytosol, nucleus, plastid 13.28 28.84
AT5G65630.1 Thale cress nucleus 36.19 28.64
TraesCS3A01G234000.1 Wheat cytosol 13.49 28.64
TraesCS3A01G140500.1 Wheat nucleus, plastid 30.62 28.04
TraesCS3A01G234500.1 Wheat cytosol 13.06 27.73
Bra005311.1-P Field mustard cytosol, plastid 13.7 27.47
AT5G10550.1 Thale cress nucleus 33.83 27.19
Bra006068.1-P Field mustard nucleus 31.48 26.78
PGSC0003DMT400078795 Potato nucleus 32.33 25.51
Solyc02g091660.2.1 Tomato nucleus 28.91 25.23
CDX70357 Canola plastid 17.99 21.37
TraesCS1A01G367300.1 Wheat cytosol 15.2 20.34
TraesCS7A01G080900.1 Wheat nucleus 14.99 19.94
TraesCS4A01G377900.2 Wheat cytosol 14.78 19.66
TraesCS6A01G214000.1 Wheat nucleus 26.77 17.71
TraesCS3A01G087800.1 Wheat plastid 22.91 17.54
TraesCS3A01G122200.1 Wheat nucleus 26.55 17.39
TraesCS7A01G312700.2 Wheat nucleus 22.06 13.73
TraesCS7A01G539800.2 Wheat nucleus, plastid 14.13 12.02
Protein Annotations
Gene3D:1.20.1270.220Gene3D:1.20.920.10MapMan:15.5.54InterPro:BromodomainInterPro:Bromodomain-like_sfncoils:Coil
GO:GO:0003674GO:GO:0005488GO:GO:0005515InterPro:IPR001487InterPro:IPR027353InterPro:IPR036427
InterPro:IPR038336InterPro:NET_domInterPro:NET_sfPFAM:PF00439PFAM:PF17035PRINTS:PR00503
PFscan:PS50014PFscan:PS51525PANTHER:PTHR22880PANTHER:PTHR22880:SF162SMART:SM00297SUPFAM:SSF47370
EnsemblPlantsGene:TraesCS2A01G466700EnsemblPlants:TraesCS2A01G466700.3SEG:seg:::
Description
No Description!
Coordinates
chr2A:-:711066757..711068361
Molecular Weight (calculated)
50586.8 Da
IEP (calculated)
6.715
GRAVY (calculated)
-0.503
Length
467 amino acids
Sequence
(BLAST)
001: MASALIAGRR AQSHHWGDNR GPLAPAPSPN PGHRALPPAD GSRAQHPLAS PGVGYATFRP SGLTHREAGA LRDRLAGELG QVRALLSRID AWQQELELEQ
101: QHRQPRRGQP REGGLPAPPS KLRAAMRKRC AQILSKLRKD KRSIWFNAPV EVETLGLHDY HAVIKSPMDL GTVKANLAAR NYPSHDAFAA DVRLTFANAL
201: RYNPAGHTVH TFAGDLLASF EKMYAAAVSW FEEECRRLPS LVPVPVPLPV PAELPPPVVP LPAQVKPRAV RMPKPKAREL NKRQMSLEEK NMLRAGLESL
301: PEEKMHNVLQ IVRKRNVNNP ELLGDEIELD IDEMDIETQW ELDRFVNNFN KALKKSRRAA MINGGIADVN NADGAGAVNG AVPILVDHAD VESENPENTV
401: VPEQVDEYVD IDDEMPTATY QSVEIEKGAE ATSVSGGSGS GSSSSSGSGS GSSGDSASEA GDARSLV
Best Arabidopsis Sequence Match ( AT1G17790.1 )
(BLAST)
001: MSSEHISGGG ASKTKKHKWS SSQNRPKPMG VSRQERSVPL VSPSNSFASE DDHHMLKISL SSISKLEVRN LKRKLKSELD EVRSLIKRFD PEANPGGSMA
101: KSGVVGRSKK VKTGNGGGKK SGHGADKGTV QIFKNCNSLL TKLMKHKSAW VFNVPVDAKG LGLHDYHNIV KEPMDLGTVK TKLGKSLYKS PLDFAEDVRL
201: TFNNAILYNP IGHDVYRFAE LLLNMFEDKW VSIEMQYDNL HRKFKPTRDI EFPAPAPSIA PIVEPLPAIV PSPSPSSPPP PPPPPVAAPV LENRTWEREE
301: SMTIPVEPEA VITAPEKAEE EEAPVNNRDL TLEEKRRLSE ELQDLPYDKL ETVVQIIKKS NPELSQKDDE IELDIDSLDI NTLWELYRFV TGYKESLSKK
401: NEAHGFGSER DAESVHNSIQ EPTTLVSGTT TSRVTESGKA IRTSSPARQE NNASGSSSSN SSSSDSGSCS SDTDSDSSSG RGSDNGN
Arabidopsis Description
GTE5Transcription factor GTE5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8H1D7]
SUBAcon: [plastid,nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.