Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- cytosol 1
- plastid 1
- nucleus 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS2D01G466700.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 96.36 | 95.74 |
TraesCS2B01G489500.1 | Wheat | plastid | 94.86 | 95.68 |
Zm00001d046528_P001 | Maize | cytosol | 24.41 | 76.0 |
OQU82367 | Sorghum | nucleus | 47.54 | 73.51 |
Os04t0622800-00 | Rice | cytosol | 46.25 | 69.45 |
Zm00001d002267_P001 | Maize | plastid | 66.81 | 69.18 |
Os04t0623100-01 | Rice | cytosol, mitochondrion, nucleus, plastid | 67.45 | 69.08 |
Zm00001d026333_P001 | Maize | cytosol | 64.67 | 64.12 |
CDY08771 | Canola | nucleus | 26.98 | 35.59 |
GSMUA_Achr1P15650_001 | Banana | nucleus | 36.62 | 34.76 |
KRH21702 | Soybean | nucleus | 39.4 | 34.65 |
KRH10646 | Soybean | nucleus | 38.54 | 34.03 |
KRH10648 | Soybean | nucleus | 38.97 | 33.96 |
GSMUA_Achr3P00480_001 | Banana | nucleus | 37.9 | 33.91 |
VIT_03s0097g00570.t01 | Wine grape | nucleus | 39.19 | 33.15 |
CDX70356 | Canola | nucleus, plastid | 16.7 | 31.58 |
CDY65645 | Canola | nucleus, plastid | 34.26 | 31.43 |
CDX78390 | Canola | nucleus | 16.06 | 31.38 |
PGSC0003DMT400008041 | Potato | nucleus | 38.97 | 30.23 |
Bra024402.1-P | Field mustard | nucleus, plastid | 35.12 | 30.09 |
Solyc01g106280.2.1 | Tomato | nucleus | 38.33 | 29.73 |
CDY65656 | Canola | cytosol | 13.06 | 29.47 |
TraesCS3A01G234100.1 | Wheat | cytosol, nucleus, plastid | 13.49 | 29.3 |
TraesCS3A01G234600.1 | Wheat | cytosol, nucleus, plastid | 13.28 | 28.84 |
AT5G65630.1 | Thale cress | nucleus | 36.19 | 28.64 |
TraesCS3A01G234000.1 | Wheat | cytosol | 13.49 | 28.64 |
TraesCS3A01G140500.1 | Wheat | nucleus, plastid | 30.62 | 28.04 |
TraesCS3A01G234500.1 | Wheat | cytosol | 13.06 | 27.73 |
Bra005311.1-P | Field mustard | cytosol, plastid | 13.7 | 27.47 |
AT5G10550.1 | Thale cress | nucleus | 33.83 | 27.19 |
Bra006068.1-P | Field mustard | nucleus | 31.48 | 26.78 |
PGSC0003DMT400078795 | Potato | nucleus | 32.33 | 25.51 |
Solyc02g091660.2.1 | Tomato | nucleus | 28.91 | 25.23 |
CDX70357 | Canola | plastid | 17.99 | 21.37 |
TraesCS1A01G367300.1 | Wheat | cytosol | 15.2 | 20.34 |
TraesCS7A01G080900.1 | Wheat | nucleus | 14.99 | 19.94 |
TraesCS4A01G377900.2 | Wheat | cytosol | 14.78 | 19.66 |
TraesCS6A01G214000.1 | Wheat | nucleus | 26.77 | 17.71 |
TraesCS3A01G087800.1 | Wheat | plastid | 22.91 | 17.54 |
TraesCS3A01G122200.1 | Wheat | nucleus | 26.55 | 17.39 |
TraesCS7A01G312700.2 | Wheat | nucleus | 22.06 | 13.73 |
TraesCS7A01G539800.2 | Wheat | nucleus, plastid | 14.13 | 12.02 |
Protein Annotations
Gene3D:1.20.1270.220 | Gene3D:1.20.920.10 | MapMan:15.5.54 | InterPro:Bromodomain | InterPro:Bromodomain-like_sf | ncoils:Coil |
GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR001487 | InterPro:IPR027353 | InterPro:IPR036427 |
InterPro:IPR038336 | InterPro:NET_dom | InterPro:NET_sf | PFAM:PF00439 | PFAM:PF17035 | PRINTS:PR00503 |
PFscan:PS50014 | PFscan:PS51525 | PANTHER:PTHR22880 | PANTHER:PTHR22880:SF162 | SMART:SM00297 | SUPFAM:SSF47370 |
EnsemblPlantsGene:TraesCS2A01G466700 | EnsemblPlants:TraesCS2A01G466700.3 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr2A:-:711066757..711068361
Molecular Weight (calculated)
50586.8 Da
IEP (calculated)
6.715
GRAVY (calculated)
-0.503
Length
467 amino acids
Sequence
(BLAST)
(BLAST)
001: MASALIAGRR AQSHHWGDNR GPLAPAPSPN PGHRALPPAD GSRAQHPLAS PGVGYATFRP SGLTHREAGA LRDRLAGELG QVRALLSRID AWQQELELEQ
101: QHRQPRRGQP REGGLPAPPS KLRAAMRKRC AQILSKLRKD KRSIWFNAPV EVETLGLHDY HAVIKSPMDL GTVKANLAAR NYPSHDAFAA DVRLTFANAL
201: RYNPAGHTVH TFAGDLLASF EKMYAAAVSW FEEECRRLPS LVPVPVPLPV PAELPPPVVP LPAQVKPRAV RMPKPKAREL NKRQMSLEEK NMLRAGLESL
301: PEEKMHNVLQ IVRKRNVNNP ELLGDEIELD IDEMDIETQW ELDRFVNNFN KALKKSRRAA MINGGIADVN NADGAGAVNG AVPILVDHAD VESENPENTV
401: VPEQVDEYVD IDDEMPTATY QSVEIEKGAE ATSVSGGSGS GSSSSSGSGS GSSGDSASEA GDARSLV
101: QHRQPRRGQP REGGLPAPPS KLRAAMRKRC AQILSKLRKD KRSIWFNAPV EVETLGLHDY HAVIKSPMDL GTVKANLAAR NYPSHDAFAA DVRLTFANAL
201: RYNPAGHTVH TFAGDLLASF EKMYAAAVSW FEEECRRLPS LVPVPVPLPV PAELPPPVVP LPAQVKPRAV RMPKPKAREL NKRQMSLEEK NMLRAGLESL
301: PEEKMHNVLQ IVRKRNVNNP ELLGDEIELD IDEMDIETQW ELDRFVNNFN KALKKSRRAA MINGGIADVN NADGAGAVNG AVPILVDHAD VESENPENTV
401: VPEQVDEYVD IDDEMPTATY QSVEIEKGAE ATSVSGGSGS GSSSSSGSGS GSSGDSASEA GDARSLV
001: MSSEHISGGG ASKTKKHKWS SSQNRPKPMG VSRQERSVPL VSPSNSFASE DDHHMLKISL SSISKLEVRN LKRKLKSELD EVRSLIKRFD PEANPGGSMA
101: KSGVVGRSKK VKTGNGGGKK SGHGADKGTV QIFKNCNSLL TKLMKHKSAW VFNVPVDAKG LGLHDYHNIV KEPMDLGTVK TKLGKSLYKS PLDFAEDVRL
201: TFNNAILYNP IGHDVYRFAE LLLNMFEDKW VSIEMQYDNL HRKFKPTRDI EFPAPAPSIA PIVEPLPAIV PSPSPSSPPP PPPPPVAAPV LENRTWEREE
301: SMTIPVEPEA VITAPEKAEE EEAPVNNRDL TLEEKRRLSE ELQDLPYDKL ETVVQIIKKS NPELSQKDDE IELDIDSLDI NTLWELYRFV TGYKESLSKK
401: NEAHGFGSER DAESVHNSIQ EPTTLVSGTT TSRVTESGKA IRTSSPARQE NNASGSSSSN SSSSDSGSCS SDTDSDSSSG RGSDNGN
101: KSGVVGRSKK VKTGNGGGKK SGHGADKGTV QIFKNCNSLL TKLMKHKSAW VFNVPVDAKG LGLHDYHNIV KEPMDLGTVK TKLGKSLYKS PLDFAEDVRL
201: TFNNAILYNP IGHDVYRFAE LLLNMFEDKW VSIEMQYDNL HRKFKPTRDI EFPAPAPSIA PIVEPLPAIV PSPSPSSPPP PPPPPVAAPV LENRTWEREE
301: SMTIPVEPEA VITAPEKAEE EEAPVNNRDL TLEEKRRLSE ELQDLPYDKL ETVVQIIKKS NPELSQKDDE IELDIDSLDI NTLWELYRFV TGYKESLSKK
401: NEAHGFGSER DAESVHNSIQ EPTTLVSGTT TSRVTESGKA IRTSSPARQE NNASGSSSSN SSSSDSGSCS SDTDSDSSSG RGSDNGN
Arabidopsis Description
GTE5Transcription factor GTE5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8H1D7]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.