Factsheet for GSMUA_Achr3P00480_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 2
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P15650_001	Banana	nucleus	66.86	70.94
CDY08771	Canola	nucleus	30.84	45.48
VIT_03s0097g00570.t01	Wine grape	nucleus	46.93	44.38
KRH10646	Soybean	nucleus	43.49	42.91
KRH21702	Soybean	nucleus	43.1	42.37
CDX78390	Canola	nucleus	19.35	42.26
KRH10648	Soybean	nucleus	43.3	42.16
CDX70356	Canola	nucleus, plastid	19.73	41.7
CDY65645	Canola	nucleus, plastid	39.66	40.67
OQU82367	Sorghum	nucleus	23.37	40.4
PGSC0003DMT400008041	Potato	nucleus	46.36	40.2
Os04t0622800-00	Rice	cytosol	23.75	39.87
Solyc01g106280.2.1	Tomato	nucleus	45.98	39.87
Os04t0623100-01	Rice	cytosol, mitochondrion, nucleus, plastid	34.29	39.25
Os08t0192800-01	Rice	nucleus	35.82	38.88
Bra024402.1-P	Field mustard	nucleus, plastid	40.42	38.72
Zm00001d046528_P001	Maize	cytosol	11.11	38.67
TraesCS2B01G489500.1	Wheat	plastid	33.91	38.23
Zm00001d002267_P001	Maize	plastid	32.95	38.14
TraesCS2A01G466700.3	Wheat	cytosol, mitochondrion, nucleus, plastid	33.91	37.9
TraesCS2D01G466700.1	Wheat	cytosol, mitochondrion, nucleus, plastid	34.1	37.87
CDY65656	Canola	cytosol	14.94	37.68
AT5G65630.1	Thale cress	nucleus	42.34	37.46
GSMUA_Achr10P...	Banana	nucleus, plastid	31.8	37.14
Bra006068.1-P	Field mustard	nucleus	38.89	36.98
Zm00001d049400_P001	Maize	plastid	34.1	36.78
AT5G10550.1	Thale cress	nucleus	40.8	36.66
KXG24660	Sorghum	plastid	34.48	36.59
Bra005311.1-P	Field mustard	cytosol, plastid	16.28	36.48
Zm00001d026333_P001	Maize	cytosol	32.38	35.88
Zm00001d024251_P001	Maize	cytosol	32.57	34.91
GSMUA_Achr11P...	Banana	nucleus	27.59	34.04
PGSC0003DMT400078795	Potato	nucleus	37.16	32.77
Solyc02g091660.2.1	Tomato	nucleus	33.52	32.71
GSMUA_Achr7P09350_001	Banana	nucleus, plastid	31.8	32.3
GSMUA_Achr1P11660_001	Banana	nucleus	30.08	30.6
CDX70357	Canola	plastid	21.84	29.01
GSMUA_Achr8P29340_001	Banana	nucleus	16.09	21.48
GSMUA_Achr8P08920_001	Banana	nucleus	26.25	21.08
GSMUA_Achr10P...	Banana	nucleus	23.95	19.59
GSMUA_Achr8P01140_001	Banana	nucleus	27.2	18.91
GSMUA_Achr8P34430_001	Banana	nucleus	15.33	18.6
GSMUA_Achr2P20970_001	Banana	nucleus	23.95	17.36
GSMUA_Achr3P02660_001	Banana	plasma membrane	21.46	17.13
GSMUA_Achr3P02670_001	Banana	nucleus	22.61	16.74
GSMUA_Achr4P27780_001	Banana	nucleus	13.98	10.83

Protein Annotations

Gene3D:1.20.1270.220	Gene3D:1.20.920.10	MapMan:15.5.54	InterPro:Bromodomain	InterPro:Bromodomain-like_sf	ncoils:Coil
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSMUA_Achr3G00480_001	EnsemblPlants:GSMUA_Achr3P00480_001	EnsemblPlants:GSMUA_Achr3T00480_001
InterPro:IPR001487	InterPro:IPR027353	InterPro:IPR036427	InterPro:IPR038336	UniProt:M0SAL6	InterPro:NET_dom
InterPro:NET_sf	PFAM:PF00439	PFAM:PF17035	PRINTS:PR00503	PFscan:PS50014	PFscan:PS51525
PANTHER:PTHR22880	PANTHER:PTHR22880:SF147	SMART:SM00297	SUPFAM:SSF47370	UniParc:UPI000295B6B7	SEG:seg

Description

Putative Bromodomain-containing protein GTE3, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr3G00480_001]

Coordinates

chr3:+:371698..373817

Molecular Weight (calculated)

57000.2 Da

IEP (calculated)

6.520

GRAVY (calculated)

-0.636

Length

522 amino acids

Sequence
(BLAST)

001: MASALLASSN EPCWGEPKVY MRKNPISNPN PRPCPNLCTV DYAGDRTARF RTMEQEEAPP VATAVVSDDS SSFNRRPADL NHRRDPAAGG SGSYVTFNIS
101: AYSKTELREL KRRLVSELDQ VRSLMIRIQS REIQSSTRSA GFGASGIYPG GTFSAKTNKE SESDKLLAAM MKKCGQILSK LMKHKKSIWF NTPVDVIGMG
201: LHDYFQIIKT PMDLGTVKKN LHKGLYPSPA EFASDVRLTF NNALLYNPKG HEVHKLAEQF LRHFEGLFGP AFHKYEKQEE QCRVSTEAAP SPGPLLPIPA
301: SPPVQSPAPF PQPKPKAKDP NKRPMSMEEK QKLSEGLQNL PPEKMSHVLH IVRKGNVSTT QNGDEIELDI DTMDTETLWA LDRFLCNCKK MMSKMKRQEA
401: IANGLLLHAG HSAAVADAQL PAEGGGEMSP VLVDASEVVA AKKSKKGDTA EEDVDIGDEL PITNYPPVEI QKDTGYATSS SSSDSDSSSS SGSDSGSSSE
501: GDSDEEENEA RSPAAGVRSQ RD

Best Arabidopsis Sequence Match ( AT5G65630.1 )
(BLAST)

001: MAPAVFATLN EPSYQEQCGA VFMRKFTNQS VTENTNNLPL FNPNPNPNFE RSNSSKQCDD SSEFGSYATF NLAGYTSSQL RELKKRFTSE LKQIRILRER
101: IESGTFETQQ GYTIPEVPAV RSAPLNNFTG EKNDLGPKKK KQKKNVSGLK RSNQFGPSDP ESEKLLAGML NTCSQILVKL MKHKWAWVFN TPVDVVGLGL
201: HDYHQVVKKP MDLGTVKLNL DKGFYVSPID FATDVRLTFD NAMTYNPKGQ DVYFMADKLL DHFDGMFNPA FKKFEAQQLK LTGSSSRPEP DFKPDFKQRQ
301: WNQNPPMVAN PRKGTEQISI AKKLDSVKPP QPTLPPQLVE PSRVQSPSPP PPPPVIQPEL PQPQPPPPQL EIEVEAPPDV SEVSKGRKGK LPKPKAKDPN
401: KRLMTMEEKS KLGMNLQDLP PEKLGQLLQI LRKRNGHLAQ DGDEIELDIE AVDNETLWEL DRFVTNYKKM ASKIKRQGFI RNVSTPPRNM ASVAEMGSAE
501: KRTRRGDAGE EDVDIGEDIP IEDYPSVEIE RDGTAVAAAA SSGSSSSGSS SSSGGSSSSS DSGSGGSSSG SDSDADSVQS PFVEAKEAQC

Arabidopsis Description

GTE7Transcription factor GTE7 [Source:UniProtKB/Swiss-Prot;Acc:Q7Y214]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.