Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 2
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX70356 | Canola | nucleus, plastid | 36.32 | 85.43 |
| CDX78390 | Canola | nucleus | 35.11 | 85.36 |
| Bra006068.1-P | Field mustard | nucleus | 72.12 | 76.32 |
| AT5G65630.1 | Thale cress | nucleus | 70.4 | 69.32 |
| CDY65656 | Canola | cytosol | 22.2 | 62.32 |
| Bra005311.1-P | Field mustard | cytosol, plastid | 23.06 | 57.51 |
| KRH10648 | Soybean | nucleus | 43.37 | 47.01 |
| KRH10646 | Soybean | nucleus | 42.34 | 46.5 |
| KRH21702 | Soybean | nucleus | 41.65 | 45.57 |
| VIT_03s0097g00570.t01 | Wine grape | nucleus | 43.03 | 45.29 |
| GSMUA_Achr3P00480_001 | Banana | nucleus | 36.66 | 40.8 |
| GSMUA_Achr1P15650_001 | Banana | nucleus | 34.08 | 40.24 |
| CDX70357 | Canola | plastid | 27.02 | 39.95 |
| PGSC0003DMT400078795 | Potato | nucleus | 40.28 | 39.53 |
| OQU82367 | Sorghum | nucleus | 20.14 | 38.74 |
| Solyc02g091660.2.1 | Tomato | nucleus | 35.46 | 38.5 |
| Zm00001d002267_P001 | Maize | plastid | 28.57 | 36.81 |
| Os04t0622800-00 | Rice | cytosol | 19.62 | 36.66 |
| Os04t0623100-01 | Rice | cytosol, mitochondrion, nucleus, plastid | 27.37 | 34.87 |
| TraesCS2B01G489500.1 | Wheat | plastid | 27.19 | 34.13 |
| Zm00001d046528_P001 | Maize | cytosol | 8.78 | 34.0 |
| Os08t0192800-01 | Rice | nucleus | 28.06 | 33.89 |
| TraesCS2A01G466700.3 | Wheat | cytosol, mitochondrion, nucleus, plastid | 27.19 | 33.83 |
| Zm00001d049400_P001 | Maize | plastid | 27.88 | 33.47 |
| TraesCS2D01G466700.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 27.02 | 33.4 |
| KXG24660 | Sorghum | plastid | 28.06 | 33.13 |
| Zm00001d026333_P001 | Maize | cytosol | 26.68 | 32.91 |
| AT1G73150.1 | Thale cress | plastid | 25.99 | 32.75 |
| Zm00001d024251_P001 | Maize | cytosol | 27.19 | 32.44 |
| AT1G17790.1 | Thale cress | nucleus, plastid | 24.96 | 29.77 |
| AT2G34900.1 | Thale cress | nucleus | 14.11 | 21.24 |
| AT3G52280.2 | Thale cress | nucleus | 13.94 | 20.98 |
| AT1G06230.2 | Thale cress | nucleus | 27.02 | 20.5 |
| AT5G14270.2 | Thale cress | nucleus | 22.55 | 19.01 |
| AT3G01770.1 | Thale cress | nucleus | 18.93 | 17.74 |
| AT3G27260.3 | Thale cress | nucleus | 20.65 | 14.6 |
| AT5G46550.1 | Thale cress | cytosol | 12.39 | 14.57 |
| AT5G63320.1 | Thale cress | nucleus | 21.86 | 11.97 |
Protein Annotations
| Gene3D:1.20.1270.220 | Gene3D:1.20.920.10 | MapMan:15.5.54 | EntrezGene:830920 | UniProt:A0A178UQD6 | ProteinID:AED91562.2 |
| EMBL:AK117955 | ArrayExpress:AT5G10550 | EnsemblPlantsGene:AT5G10550 | RefSeq:AT5G10550 | TAIR:AT5G10550 | RefSeq:AT5G10550-TAIR-G |
| EnsemblPlants:AT5G10550.1 | TAIR:AT5G10550.1 | InterPro:Bromodomain | InterPro:Bromodomain-like_sf | ProteinID:CAB89388.1 | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | Symbol:GTE2 | InterPro:GTE_bromo | InterPro:IPR001487 | InterPro:IPR027353 |
| InterPro:IPR036427 | InterPro:IPR038336 | InterPro:NET_dom | InterPro:NET_sf | RefSeq:NP_196617.2 | ProteinID:OAO96038.1 |
| PFAM:PF00439 | PFAM:PF17035 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PRINTS:PR00503 |
| PFscan:PS50014 | PFscan:PS51525 | PANTHER:PTHR22880 | PANTHER:PTHR22880:SF147 | UniProt:Q9LXA7 | SMART:SM00297 |
| SUPFAM:SSF47370 | UniParc:UPI0001FEF4DD | SEG:seg | : | : | : |
Description
GTE2Transcription factor GTE2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXA7]
Coordinates
chr5:-:3332995..3334913
Molecular Weight (calculated)
64106.7 Da
IEP (calculated)
6.556
GRAVY (calculated)
-0.713
Length
581 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPAVLANLN EPLFLGQCGA VFMRKYTNQP LSGDINNPLF NPNPNPNSIS AYGNNSSKHF DDSSAYGDYV SFDLDGYTSN QLRELKKRLN SELEEVRFLR
101: ERIESGTFVS GSVYTTQARS FAGETNDVGV KKTKTKKKKI GHGQKRSNPF ATDEPSLKRH VALDLMSEKV LKSMMTTCGQ ILVKLMKHKW SWVFLNPVDV
201: VGLGLHDYHR IVDKPMDLGT VKMNLEKGLY RSPIDFASDV RLTFTNAMSY NPKGQDVYLM AEKLLSQFDV WFNPTLKRFE AQEVKVMGSS SRPGPEDNQR
301: VWNQNNVAEN ARKGPEQISI AKKLDSVKPL LPTLPPPPVI EITRDPSPPP SPVQPPPPPS PPPQPVNQVE ASLEVRETNK GRKGKLPKPK AKDPNKREMT
401: MDEKGKLGVN LQELPPEKLG QLIQILRKRT RDLPQDGDEI ELDIEALDNE TLWELDRFVT NYRKMASKIK RQGFIQNVST PPRNMPPVTE MGSAEKRGRK
501: GGEAGEEDVD IGEDIPVEDY PSVEIERDGT AAAASGGSSS SGSFSSSGSS SSSDSESGSS SGSDSDADSV QSPFVEAKEA P
101: ERIESGTFVS GSVYTTQARS FAGETNDVGV KKTKTKKKKI GHGQKRSNPF ATDEPSLKRH VALDLMSEKV LKSMMTTCGQ ILVKLMKHKW SWVFLNPVDV
201: VGLGLHDYHR IVDKPMDLGT VKMNLEKGLY RSPIDFASDV RLTFTNAMSY NPKGQDVYLM AEKLLSQFDV WFNPTLKRFE AQEVKVMGSS SRPGPEDNQR
301: VWNQNNVAEN ARKGPEQISI AKKLDSVKPL LPTLPPPPVI EITRDPSPPP SPVQPPPPPS PPPQPVNQVE ASLEVRETNK GRKGKLPKPK AKDPNKREMT
401: MDEKGKLGVN LQELPPEKLG QLIQILRKRT RDLPQDGDEI ELDIEALDNE TLWELDRFVT NYRKMASKIK RQGFIQNVST PPRNMPPVTE MGSAEKRGRK
501: GGEAGEEDVD IGEDIPVEDY PSVEIERDGT AAAASGGSSS SGSFSSSGSS SSSDSESGSS SGSDSDADSV QSPFVEAKEA P
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.