Factsheet for Bra005311.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY65656	Canola	cytosol	86.7	97.58
Bra006068.1-P	Field mustard	nucleus	62.66	26.59
AT5G10550.1	Thale cress	nucleus	57.51	23.06
Bra024402.1-P	Field mustard	nucleus, plastid	51.5	22.02
OQU82367	Sorghum	nucleus	27.04	20.86
Os04t0622800-00	Rice	cytosol	25.75	19.29
KRH21702	Soybean	nucleus	39.48	17.33
KRH10646	Soybean	nucleus	39.06	17.2
KRH10648	Soybean	nucleus	39.06	16.98
GSMUA_Achr3P00480_001	Banana	nucleus	36.48	16.28
VIT_03s0097g00570.t01	Wine grape	nucleus	38.2	16.12
Bra038624.1-P	Field mustard	nucleus	16.31	15.7
Os04t0623100-01	Rice	cytosol, mitochondrion, nucleus, plastid	29.18	14.91
Bra008074.1-P	Field mustard	nucleus, plastid	24.89	14.8
Solyc02g091660.2.1	Tomato	nucleus	33.91	14.77
Bra031004.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	22.32	14.65
GSMUA_Achr1P15650_001	Banana	nucleus	30.47	14.43
Zm00001d002267_P001	Maize	plastid	27.9	14.41
PGSC0003DMT400078795	Potato	nucleus	36.05	14.19
TraesCS2B01G489500.1	Wheat	plastid	27.9	14.04
Bra025948.1-P	Field mustard	mitochondrion	24.89	14.01
Zm00001d046528_P001	Maize	cytosol	9.01	14.0
Os08t0192800-01	Rice	nucleus	28.33	13.72
TraesCS2A01G466700.3	Wheat	cytosol, mitochondrion, nucleus, plastid	27.47	13.7
TraesCS2D01G466700.1	Wheat	cytosol, mitochondrion, nucleus, plastid	27.47	13.62
Zm00001d026333_P001	Maize	cytosol	27.47	13.59
KXG24660	Sorghum	plastid	27.9	13.21
Zm00001d024251_P001	Maize	cytosol	27.47	13.14
Zm00001d049400_P001	Maize	plastid	27.04	13.02
Bra016586.1-P	Field mustard	nucleus, plastid	24.03	12.73
Bra032431.1-P	Field mustard	nucleus	30.47	10.81
Bra005383.1-P	Field mustard	nucleus	16.74	10.13
Bra030643.1-P	Field mustard	nucleus	31.33	9.88
Bra012810.1-P	Field mustard	cytosol	15.02	9.83
Bra015485.1-P	Field mustard	nucleus	30.47	9.48
Bra025262.1-P	Field mustard	nucleus	21.03	9.06
Bra034451.1-P	Field mustard	cytosol	17.6	7.77
Bra039088.1-P	Field mustard	nucleus	21.03	7.53
Bra022044.1-P	Field mustard	nucleus	16.31	7.24
Bra035848.1-P	Field mustard	nucleus	20.17	3.95

Protein Annotations

Gene3D:1.20.1270.220	Gene3D:1.20.920.10	MapMan:35.1	EnsemblPlantsGene:Bra005311	EnsemblPlants:Bra005311.1	EnsemblPlants:Bra005311.1-P
InterPro:Bromodomain	InterPro:Bromodomain-like_sf	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001487
InterPro:IPR027353	InterPro:IPR036427	InterPro:IPR038336	UniProt:M4CM74	InterPro:NET_dom	InterPro:NET_sf
PFAM:PF00439	PFAM:PF17035	PRINTS:PR00503	PFscan:PS51525	PANTHER:PTHR22880	PANTHER:PTHR22880:SF147
SUPFAM:SSF47370	UniParc:UPI0002547D44	SEG:seg	:	:	:

Description

AT5G10550 (E=4e-021) GTE2 | GTE2 (Global transcription factor group E 2); DNA binding

Coordinates

chrA05:+:4741879..4742739

Molecular Weight (calculated)

26320.1 Da

IEP (calculated)

10.585

GRAVY (calculated)

-0.430

Length

233 amino acids

Sequence
(BLAST)

001: MMTLATHSIS FFVPNFMRSD LGEADEAQVV VGVQHARRRV RTNLEKGFHR SPVDFASDVR LTFTNALAYN SKGQDVYKMA EKLLSQFDPL PTLPLPRAHL
101: LLHRHLPSRW LAKWKHLLRT SQPVNQVEAS PLEVGEAPKG RKGKLPKPKA KDPNKREMTM EEKAKLGVNL QELPPEKLGQ LIQILKKRTT NLSQDGDDIA
201: LDIAFCNLHS INQSMIMKSV QISSKSPVAL YRI

Best Arabidopsis Sequence Match ( AT5G10550.1 )
(BLAST)

001: MAPAVLANLN EPLFLGQCGA VFMRKYTNQP LSGDINNPLF NPNPNPNSIS AYGNNSSKHF DDSSAYGDYV SFDLDGYTSN QLRELKKRLN SELEEVRFLR
101: ERIESGTFVS GSVYTTQARS FAGETNDVGV KKTKTKKKKI GHGQKRSNPF ATDEPSLKRH VALDLMSEKV LKSMMTTCGQ ILVKLMKHKW SWVFLNPVDV
201: VGLGLHDYHR IVDKPMDLGT VKMNLEKGLY RSPIDFASDV RLTFTNAMSY NPKGQDVYLM AEKLLSQFDV WFNPTLKRFE AQEVKVMGSS SRPGPEDNQR
301: VWNQNNVAEN ARKGPEQISI AKKLDSVKPL LPTLPPPPVI EITRDPSPPP SPVQPPPPPS PPPQPVNQVE ASLEVRETNK GRKGKLPKPK AKDPNKREMT
401: MDEKGKLGVN LQELPPEKLG QLIQILRKRT RDLPQDGDEI ELDIEALDNE TLWELDRFVT NYRKMASKIK RQGFIQNVST PPRNMPPVTE MGSAEKRGRK
501: GGEAGEEDVD IGEDIPVEDY PSVEIERDGT AAAASGGSSS SGSFSSSGSS SSSDSESGSS SGSDSDADSV QSPFVEAKEA P

Arabidopsis Description

GTE2Transcription factor GTE2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXA7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.