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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • plasma membrane 1
  • mitochondrion 2
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY13699 Canola nucleus 84.1 99.56
CDX83673 Canola nucleus 80.78 87.75
Bra039088.1-P Field mustard nucleus 81.52 67.74
AT3G27260.3 Thale cress nucleus 84.84 55.84
VIT_14s0171g00380.t01 Wine grape nucleus 58.41 42.88
KRH07021 Soybean nucleus 58.96 42.88
KRG94435 Soybean nucleus 58.6 42.72
PGSC0003DMT400052108 Potato nucleus 56.56 41.98
Solyc02g093880.2.1 Tomato nucleus 54.34 40.55
Bra038624.1-P Field mustard nucleus 17.93 40.08
KRH07022 Soybean nucleus 56.19 38.68
TraesCS3A01G087800.1 Wheat plastid 41.22 36.56
GSMUA_Achr8P01140_001 Banana nucleus 49.72 35.82
KXG24325 Sorghum nucleus 46.03 35.17
GSMUA_Achr10P... Banana nucleus 41.04 34.8
GSMUA_Achr2P20970_001 Banana nucleus 46.03 34.58
Os02t0601800-03 Rice nucleus 43.25 32.77
GSMUA_Achr3P02660_001 Banana plasma membrane 39.56 32.72
Zm00001d035167_P001 Maize nucleus 45.84 32.72
GSMUA_Achr8P08920_001 Banana nucleus 39.19 32.62
TraesCS7D01G309100.1 Wheat nucleus 44.73 32.27
TraesCS6D01G196600.3 Wheat nucleus 41.59 32.01
TraesCS7A01G312700.2 Wheat nucleus 44.18 31.87
EES07108 Sorghum nucleus 41.59 31.65
TraesCS7B01G212400.2 Wheat nucleus 43.81 31.6
TraesCS6A01G214000.1 Wheat nucleus 41.22 31.59
TraesCS6B01G244000.2 Wheat plastid 41.59 31.25
HORVU6Hr1G054560.16 Barley nucleus 41.22 31.19
TraesCS3D01G087900.4 Wheat nucleus 41.22 31.15
TraesCS3B01G141400.2 Wheat nucleus, plastid 41.04 31.14
TraesCS3D01G124100.1 Wheat nucleus 41.04 31.14
TraesCS3A01G122200.1 Wheat nucleus 40.85 31.0
TraesCS3B01G103200.2 Wheat nucleus 40.85 30.91
Zm00001d017126_P001 Maize nucleus 39.74 30.89
HORVU7Hr1G074620.7 Barley cytosol, mitochondrion, nucleus 44.36 30.81
HORVU3Hr1G022660.1 Barley nucleus 40.48 30.76
Zm00001d049638_P009 Maize nucleus 43.81 30.5
GSMUA_Achr3P02670_001 Banana nucleus 36.78 28.23
Bra022044.1-P Field mustard nucleus 26.43 27.24
HORVU3Hr1G015760.1 Barley nucleus 25.69 25.18
Bra031004.1-P Field mustard cytosol, mitochondrion, nucleus, plastid 14.97 22.82
Bra008074.1-P Field mustard nucleus, plastid 16.27 22.45
Bra025948.1-P Field mustard mitochondrion 16.82 21.98
Bra016586.1-P Field mustard nucleus, plastid 17.19 21.14
Bra035848.1-P Field mustard nucleus 46.4 21.07
Bra005311.1-P Field mustard cytosol, plastid 9.06 21.03
Bra006068.1-P Field mustard nucleus 19.41 19.13
Bra024402.1-P Field mustard nucleus, plastid 18.11 17.98
Bra005383.1-P Field mustard nucleus 12.57 17.66
Bra012810.1-P Field mustard cytosol 10.91 16.57
Bra032431.1-P Field mustard nucleus 18.67 15.37
Bra030643.1-P Field mustard nucleus 19.22 14.07
Bra015485.1-P Field mustard nucleus 19.22 13.89
Bra034451.1-P Field mustard cytosol 10.91 11.17
Protein Annotations
Gene3D:1.20.1270.220Gene3D:1.20.920.10MapMan:15.5.54EnsemblPlantsGene:Bra025262EnsemblPlants:Bra025262.1EnsemblPlants:Bra025262.1-P
InterPro:BromodomainInterPro:Bromodomain-like_sfncoils:CoilGO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:GTE_bromoInterPro:IPR001487InterPro:IPR027353InterPro:IPR036427InterPro:IPR038336UniProt:M4E906
InterPro:NET_domInterPro:NET_sfPFAM:PF00439PFAM:PF17035PRINTS:PR00503PFscan:PS50014
PFscan:PS51525PANTHER:PTHR22880PANTHER:PTHR22880:SF227SMART:SM00297SUPFAM:SSF47370UniParc:UPI000253F5B0
SEG:seg:::::
Description
AT3G27260 (E=1e-187) GTE8 | GTE8; DNA binding
Coordinates
chrA06:-:22504826..22507555
Molecular Weight (calculated)
60207.6 Da
IEP (calculated)
4.528
GRAVY (calculated)
-0.768
Length
541 amino acids
Sequence
(BLAST)
001: MKQCDTLLKK LWSHPHSWVF QAPVDVVKLN IPDYLTIIKH PMDLGTIKKN LASGVYSSPH EFAADVRLTF TNAMTYNPPG HDVHIMGDIL SKLFEARWKA
101: IEKKLPVTLP AVTVEPREEK RAAVFVPPAK KRKMASSPVR ESVPEPVKAL VMTAEERHRL GRQLESLLEE LPAQIIDFLK KHSSNGGEIA EDEIEIDIDV
201: LSDEVLFSLK KLLDEHIQDK EAKQSNVEPC EIELPKGSGP SSSLLQRGNE MADEYVGGNE PPISRSSSDS ESGSSEDQSD DAKPIIQEGG SKIPETTNSE
301: AQRDEDTRID DLLNGSESNG APEQMDISTQ QKPSSDETDG QPDGNTLENP VSSEKKYRAA LLKNKFADII LKAREKTLPQ NSNKGDPEKL RKEREELELK
401: KKKERARLQA EAEAAENARR QAEAEAAAEA AAESKRQREV EREAARQALL KMEKTVEINE NSRFLEDLEM LRSSVPEQLL SSVDEISPER TLDALGSFNL
501: GGMNPLEQLG LYMKQDDDED EPEAPPTVPK LATDVEEGEI D
Best Arabidopsis Sequence Match ( AT3G27260.4 )
(BLAST)
001: MVESAAFPGG YYRNTFEAPE ESEGSGSSAQ IDTEVTASEN SSTPARKCIM LNSNDEDPYG VQRQVISLYN MSQSERKDLI YRLKLELEQT KIVLKNAELQ
101: RMNPAAVSST SDRVGFSTGQ KISSRVSNSK KPSDFAVGSG KKVRHQNGTS RGWNRGTSGK FESSKETMTS TPNITLMKQC DTLLRKLWSH PHSWVFQAPV
201: DVVKLNIPDY LTTIKHPMDL GTVKKNLASG VYSSPHEFAA DVRLTFTNAM TYNPPGHDVH IMGDILSKLF EARWKTIKKK LPPCSMQTLP AVTLEPNDER
301: KAAISVPPAK KRKMASPVRE SVPEPVKPLM TEVERHRLGR QLESLLDELP AHIIDFLKKH NSNGGEIAED EIEIDIDVLS DEVLVTLRNL LDEYIQNKEA
401: KQTNVEPCEI ELINGSRPSN SSLQRGNEMA DEYVDGNEPP ISRSSSDSDS GSSEDQSDDA KPMVQGDSSK MPETANSEAQ RDENTRIDDL FVGSQSTGAL
501: EQMDICSQQK LSSDESDGQH EGNILETPAS SEKRYRAALL KNRFADIILK AREKPLPQNG IKGDPERLRK EREELVLQKK KEKARLQAEA EAAEDARRQA
601: EAEAAAEAAA EAKRKRELER EAARQALLKM EKTVEINENS RFLEDLEMLS SSAPEQLPSS AEETSPERPL DALGSFNLRG SNPLEQLGLY MKQDDDEEEP
701: EAPAVPNLAN DVEEGEID
Arabidopsis Description
GTE8Global transcription factor group E8 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LS77]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.