Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY13699 | Canola | nucleus | 87.75 | 95.62 |
| Bra025262.1-P | Field mustard | nucleus | 87.75 | 80.78 |
| CDY20057 | Canola | nucleus | 71.69 | 55.35 |
| AT3G27260.3 | Thale cress | nucleus | 74.9 | 45.38 |
| KRH07021 | Soybean | nucleus | 52.61 | 35.22 |
| KRG94435 | Soybean | nucleus | 52.21 | 35.04 |
| VIT_14s0171g00380.t01 | Wine grape | nucleus | 50.6 | 34.19 |
| PGSC0003DMT400052108 | Potato | nucleus | 48.39 | 33.06 |
| Solyc02g093880.2.1 | Tomato | nucleus | 47.19 | 32.41 |
| KRH07022 | Soybean | nucleus | 50.4 | 31.93 |
| CDX84396 | Canola | nucleus | 38.55 | 31.32 |
| GSMUA_Achr8P01140_001 | Banana | nucleus | 42.37 | 28.1 |
| GSMUA_Achr2P20970_001 | Banana | nucleus | 39.56 | 27.36 |
| KXG24325 | Sorghum | nucleus | 38.76 | 27.26 |
| TraesCS3A01G087800.1 | Wheat | plastid | 33.33 | 27.21 |
| GSMUA_Achr10P... | Banana | nucleus | 32.53 | 25.39 |
| TraesCS7D01G309100.1 | Wheat | nucleus | 38.15 | 25.33 |
| Zm00001d035167_P001 | Maize | nucleus | 38.55 | 25.33 |
| TraesCS7A01G312700.2 | Wheat | nucleus | 37.55 | 24.93 |
| Os02t0601800-03 | Rice | nucleus | 35.74 | 24.93 |
| TraesCS7B01G212400.2 | Wheat | nucleus | 37.35 | 24.8 |
| GSMUA_Achr8P08920_001 | Banana | nucleus | 31.73 | 24.31 |
| TraesCS6D01G196600.3 | Wheat | nucleus | 34.14 | 24.18 |
| TraesCS6A01G214000.1 | Wheat | nucleus | 34.14 | 24.08 |
| EES07108 | Sorghum | nucleus | 34.34 | 24.05 |
| HORVU7Hr1G074620.7 | Barley | cytosol, mitochondrion, nucleus | 37.55 | 24.01 |
| TraesCS6B01G244000.2 | Wheat | plastid | 34.14 | 23.61 |
| Zm00001d049638_P009 | Maize | nucleus | 36.55 | 23.42 |
| GSMUA_Achr3P02660_001 | Banana | plasma membrane | 30.72 | 23.39 |
| HORVU6Hr1G054560.16 | Barley | nucleus | 33.53 | 23.36 |
| TraesCS3D01G124100.1 | Wheat | nucleus | 33.33 | 23.28 |
| TraesCS3B01G141400.2 | Wheat | nucleus, plastid | 33.33 | 23.28 |
| TraesCS3D01G087900.4 | Wheat | nucleus | 33.33 | 23.18 |
| TraesCS3A01G122200.1 | Wheat | nucleus | 33.13 | 23.14 |
| TraesCS3B01G103200.2 | Wheat | nucleus | 33.13 | 23.08 |
| Zm00001d017126_P001 | Maize | nucleus | 32.13 | 22.99 |
| HORVU3Hr1G022660.1 | Barley | nucleus | 32.73 | 22.89 |
| CDY43984 | Canola | endoplasmic reticulum | 18.27 | 20.82 |
| CDX78390 | Canola | nucleus | 9.84 | 20.5 |
| CDX70356 | Canola | nucleus, plastid | 10.04 | 20.24 |
| GSMUA_Achr3P02670_001 | Banana | nucleus | 27.71 | 19.57 |
| CDY66497 | Canola | nucleus | 5.82 | 18.71 |
| CDY16729 | Canola | nucleus | 39.56 | 17.25 |
| CDY48139 | Canola | nucleus | 29.12 | 16.4 |
| CDY26219 | Canola | nucleus | 5.82 | 15.59 |
| CDY15568 | Canola | nucleus | 9.44 | 14.83 |
| HORVU3Hr1G015760.1 | Barley | nucleus | 16.27 | 14.67 |
| CDX82101 | Canola | nucleus | 5.02 | 13.66 |
| CDY65656 | Canola | cytosol | 5.62 | 13.53 |
| CDY08771 | Canola | nucleus | 9.44 | 13.28 |
| CDX81848 | Canola | cytosol, nucleus, plastid | 6.02 | 10.91 |
| CDY21732 | Canola | cytosol | 5.42 | 10.63 |
| CDY26215 | Canola | mitochondrion | 8.63 | 10.39 |
| CDX83890 | Canola | nucleus, plastid | 7.63 | 10.38 |
| CDX96751 | Canola | nucleus, plastid | 7.43 | 10.11 |
| CDY48040 | Canola | nucleus, plastid | 7.43 | 9.44 |
| CDY65645 | Canola | nucleus, plastid | 9.44 | 9.23 |
| CDY19175 | Canola | nucleus, plastid | 7.03 | 9.11 |
| CDX82103 | Canola | plastid | 5.22 | 8.31 |
| CDX90608 | Canola | cytosol | 5.62 | 7.87 |
| CDY09981 | Canola | nucleus | 9.64 | 7.51 |
| CDY06203 | Canola | nucleus | 9.64 | 7.45 |
| CDY29075 | Canola | cytoskeleton, cytosol, nucleus | 5.42 | 7.42 |
| CDY31648 | Canola | nucleus | 6.22 | 7.29 |
| CDX84278 | Canola | nucleus | 6.22 | 7.08 |
| CDX86532 | Canola | nucleus | 9.44 | 6.67 |
| CDY72432 | Canola | cytosol | 2.41 | 2.38 |
| CDY68605 | Canola | cytosol | 2.41 | 2.19 |
| CDX70357 | Canola | plastid | 1.2 | 1.53 |
Protein Annotations
| EnsemblPlants:CDX83673 | EnsemblPlantsGene:GSBRNA2T00139377001 | Gene3D:1.20.1270.220 | InterPro:IPR027353 | InterPro:IPR038336 | InterPro:NET_dom |
| InterPro:NET_sf | ncoils:Coil | PANTHER:PTHR22880 | PANTHER:PTHR22880:SF227 | PFAM:PF17035 | PFscan:PS51525 |
| ProteinID:CDX83673 | ProteinID:CDX83673.1 | SEG:seg | UniParc:UPI0004EEBFD9 | MapMan:35.1 | : |
Description
BnaC07g24130D
Coordinates
chrLK031833:+:1547050..1549781
Molecular Weight (calculated)
55522.1 Da
IEP (calculated)
4.477
GRAVY (calculated)
-0.747
Length
498 amino acids
Sequence
(BLAST)
(BLAST)
001: MGDILSKLFE ARWKAIEKKL PVTLPAITVE PRDEKRAAVF VPPAKKRKMA SSPVRESVPE PVKALVMTAE ERHRLGRQLE SLLEELPAQI IDFLKKHSSN
101: GGEIAEDEIE IDIDVLSDEV LFSLKKLLDE HIRDKEAKQS NVEPIEIELL NGSGPSNSLL QRGNDMADEY VGGNEPPISR SSSEPLHSAS ALMFYHQLVA
201: QIYFLSIKFH IFIRSHLDSM VVVDRQPNSE SGSSEDQSAD AKPMIQEGAS KIPETTNSEA QRDEDVRIDD GSESNGAPEQ MDLSTQQKPS SDETDGQPDG
301: NTLENPVSSE KKYRAALLKN KFADIILKAR EKTLPQQNSS KGDPEKLRKE REELELKKKK ERARLQAEAE AAENARRQAE AEAAAEAAAE SKRQREVERE
401: AARQALLKME KTVEINENSR FLEDLEMLRS SVPEQLLSSV DEISPERTLD ALGSFNLGGM NPLEQLGLYM KQDDDEDEPE APPAVPKLAT DVEEGEID
101: GGEIAEDEIE IDIDVLSDEV LFSLKKLLDE HIRDKEAKQS NVEPIEIELL NGSGPSNSLL QRGNDMADEY VGGNEPPISR SSSEPLHSAS ALMFYHQLVA
201: QIYFLSIKFH IFIRSHLDSM VVVDRQPNSE SGSSEDQSAD AKPMIQEGAS KIPETTNSEA QRDEDVRIDD GSESNGAPEQ MDLSTQQKPS SDETDGQPDG
301: NTLENPVSSE KKYRAALLKN KFADIILKAR EKTLPQQNSS KGDPEKLRKE REELELKKKK ERARLQAEAE AAENARRQAE AEAAAEAAAE SKRQREVERE
401: AARQALLKME KTVEINENSR FLEDLEMLRS SVPEQLLSSV DEISPERTLD ALGSFNLGGM NPLEQLGLYM KQDDDEDEPE APPAVPKLAT DVEEGEID
001: MVESAAFPGG YYRNTFEAPE ESEGSGSSAQ IDTEVTASEN SSTPARKCIM LNSNDEDPYG VQRQVISLYN MSQSERKDLI YRLKLELEQT KIVLKNAELQ
101: RMNPAAVSST SDRVGFSTGQ KISSRVSNSK KPSDFAVGSG KKVRHQNGTS RGWNRGTSGK FESSKETMTS TPNITLMKQC DTLLRKLWSH PHSWVFQAPV
201: DVVKLNIPDY LTTIKHPMDL GTVKKNLASG VYSSPHEFAA DVRLTFTNAM TYNPPGHDVH IMGDILSKLF EARWKTIKKK LPPCSMQTLP AVTLEPNDER
301: KAAISVPPAK KRKMASPVRE SVPEPVKPLM TEVERHRLGR QLESLLDELP AHIIDFLKKH NSNGGEIAED EIEIDIDVLS DEVLVTLRNL LDEYIQNKEA
401: KQTNVEPCEI ELINGSRPSN SSLQRGNEMA DEYVDGNEPP ISRSSSDSDS GSSEDQSDDA KPMVQGDSSK MPETANSEAQ RDENTRIDDL FVGSQSTGAL
501: EQMDICSQQK LSSDESDGQH EGNILETPAS SEKRYRAALL KNRFADIILK AREKPLPQNG IKGDPERLRK EREELVLQKK KEKARLQAEA EAAEDARRQA
601: EAEAAAEAAA EAKRKRELER EAARQALLKM EKTVEINENS RFLEDLEMLS SSAPEQLPSS AEETSPERPL DALGSFNLRG SNPLEQLGLY MKQDDDEEEP
701: EAPAVPNLAN DVEEGEID
101: RMNPAAVSST SDRVGFSTGQ KISSRVSNSK KPSDFAVGSG KKVRHQNGTS RGWNRGTSGK FESSKETMTS TPNITLMKQC DTLLRKLWSH PHSWVFQAPV
201: DVVKLNIPDY LTTIKHPMDL GTVKKNLASG VYSSPHEFAA DVRLTFTNAM TYNPPGHDVH IMGDILSKLF EARWKTIKKK LPPCSMQTLP AVTLEPNDER
301: KAAISVPPAK KRKMASPVRE SVPEPVKPLM TEVERHRLGR QLESLLDELP AHIIDFLKKH NSNGGEIAED EIEIDIDVLS DEVLVTLRNL LDEYIQNKEA
401: KQTNVEPCEI ELINGSRPSN SSLQRGNEMA DEYVDGNEPP ISRSSSDSDS GSSEDQSDDA KPMVQGDSSK MPETANSEAQ RDENTRIDDL FVGSQSTGAL
501: EQMDICSQQK LSSDESDGQH EGNILETPAS SEKRYRAALL KNRFADIILK AREKPLPQNG IKGDPERLRK EREELVLQKK KEKARLQAEA EAAEDARRQA
601: EAEAAAEAAA EAKRKRELER EAARQALLKM EKTVEINENS RFLEDLEMLS SSAPEQLPSS AEETSPERPL DALGSFNLRG SNPLEQLGLY MKQDDDEEEP
701: EAPAVPNLAN DVEEGEID
Arabidopsis Description
GTE8Global transcription factor group E8 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LS77]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.