Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX83673 | Canola | nucleus | 95.62 | 87.75 |
| Bra025262.1-P | Field mustard | nucleus | 99.56 | 84.1 |
| CDY20057 | Canola | nucleus | 79.21 | 56.12 |
| AT3G27260.3 | Thale cress | nucleus | 82.28 | 45.74 |
| KRH07021 | Soybean | nucleus | 57.33 | 35.22 |
| KRG94435 | Soybean | nucleus | 56.89 | 35.04 |
| VIT_14s0171g00380.t01 | Wine grape | nucleus | 54.92 | 34.06 |
| PGSC0003DMT400052108 | Potato | nucleus | 53.17 | 33.33 |
| Solyc02g093880.2.1 | Tomato | nucleus | 51.42 | 32.41 |
| KRH07022 | Soybean | nucleus | 54.27 | 31.55 |
| CDX84396 | Canola | nucleus | 41.58 | 31.0 |
| GSMUA_Achr8P01140_001 | Banana | nucleus | 45.3 | 27.56 |
| KXG24325 | Sorghum | nucleus | 42.67 | 27.54 |
| TraesCS3A01G087800.1 | Wheat | plastid | 36.1 | 27.05 |
| GSMUA_Achr2P20970_001 | Banana | nucleus | 42.01 | 26.67 |
| Zm00001d035167_P001 | Maize | nucleus | 42.45 | 25.59 |
| TraesCS7D01G309100.1 | Wheat | nucleus | 41.58 | 25.33 |
| TraesCS7A01G312700.2 | Wheat | nucleus | 40.92 | 24.93 |
| GSMUA_Achr10P... | Banana | nucleus | 34.79 | 24.92 |
| TraesCS7B01G212400.2 | Wheat | nucleus | 40.7 | 24.8 |
| Os02t0601800-03 | Rice | nucleus | 38.51 | 24.65 |
| EES07108 | Sorghum | nucleus | 37.64 | 24.19 |
| TraesCS6D01G196600.3 | Wheat | nucleus | 37.2 | 24.18 |
| HORVU7Hr1G074620.7 | Barley | cytosol, mitochondrion, nucleus | 41.14 | 24.13 |
| TraesCS6A01G214000.1 | Wheat | nucleus | 37.2 | 24.08 |
| GSMUA_Achr8P08920_001 | Banana | nucleus | 34.14 | 24.0 |
| TraesCS6B01G244000.2 | Wheat | plastid | 37.2 | 23.61 |
| Zm00001d049638_P009 | Maize | nucleus | 40.04 | 23.55 |
| HORVU6Hr1G054560.16 | Barley | nucleus | 36.54 | 23.36 |
| TraesCS3D01G124100.1 | Wheat | nucleus | 36.1 | 23.14 |
| TraesCS3B01G141400.2 | Wheat | nucleus, plastid | 36.1 | 23.14 |
| Zm00001d017126_P001 | Maize | nucleus | 35.23 | 23.13 |
| TraesCS3D01G087900.4 | Wheat | nucleus | 36.1 | 23.04 |
| TraesCS3A01G122200.1 | Wheat | nucleus | 35.89 | 23.0 |
| TraesCS3B01G103200.2 | Wheat | nucleus | 35.89 | 22.94 |
| GSMUA_Achr3P02660_001 | Banana | plasma membrane | 32.82 | 22.94 |
| HORVU3Hr1G022660.1 | Barley | nucleus | 35.45 | 22.75 |
| CDY43984 | Canola | endoplasmic reticulum | 20.13 | 21.05 |
| CDX78390 | Canola | nucleus | 10.72 | 20.5 |
| CDX70356 | Canola | nucleus, plastid | 10.94 | 20.24 |
| CDY66497 | Canola | nucleus | 6.56 | 19.35 |
| GSMUA_Achr3P02670_001 | Banana | nucleus | 29.54 | 19.15 |
| CDY16729 | Canola | nucleus | 43.11 | 17.25 |
| CDY48139 | Canola | nucleus | 31.51 | 16.29 |
| CDY26219 | Canola | nucleus | 6.56 | 16.13 |
| HORVU3Hr1G015760.1 | Barley | nucleus | 17.72 | 14.67 |
| CDY15568 | Canola | nucleus | 10.07 | 14.51 |
| CDX82101 | Canola | nucleus | 5.47 | 13.66 |
| CDY65656 | Canola | cytosol | 6.13 | 13.53 |
| CDY08771 | Canola | nucleus | 10.28 | 13.28 |
| CDX81848 | Canola | cytosol, nucleus, plastid | 6.56 | 10.91 |
| CDX83890 | Canola | nucleus, plastid | 8.53 | 10.66 |
| CDY21732 | Canola | cytosol | 5.91 | 10.63 |
| CDY26215 | Canola | mitochondrion | 9.63 | 10.63 |
| CDX96751 | Canola | nucleus, plastid | 8.32 | 10.38 |
| CDY48040 | Canola | nucleus, plastid | 8.53 | 9.95 |
| CDY19175 | Canola | nucleus, plastid | 7.88 | 9.38 |
| CDY65645 | Canola | nucleus, plastid | 10.28 | 9.23 |
| CDX82103 | Canola | plastid | 5.69 | 8.31 |
| CDX90608 | Canola | cytosol | 6.13 | 7.87 |
| CDY29075 | Canola | cytoskeleton, cytosol, nucleus | 5.91 | 7.42 |
| CDY09981 | Canola | nucleus | 10.28 | 7.36 |
| CDY06203 | Canola | nucleus | 10.28 | 7.3 |
| CDY31648 | Canola | nucleus | 6.78 | 7.29 |
| CDX84278 | Canola | nucleus | 6.78 | 7.08 |
| CDX86532 | Canola | nucleus | 10.07 | 6.52 |
| CDY72432 | Canola | cytosol | 2.63 | 2.38 |
| CDY68605 | Canola | cytosol | 2.63 | 2.19 |
| CDX70357 | Canola | plastid | 1.31 | 1.53 |
Protein Annotations
| EnsemblPlants:CDY13699 | EnsemblPlantsGene:GSBRNA2T00078124001 | Gene3D:1.20.1270.220 | InterPro:IPR027353 | InterPro:IPR038336 | InterPro:NET_dom |
| InterPro:NET_sf | ncoils:Coil | PANTHER:PTHR22880 | PANTHER:PTHR22880:SF227 | PFAM:PF17035 | PFscan:PS51525 |
| ProteinID:CDY13699 | ProteinID:CDY13699.1 | SEG:seg | UniParc:UPI0004EE9216 | UniProt:A0A078FLA5 | MapMan:35.1 |
Description
BnaA06g32240DBnaA06g32240D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FLA5]
Coordinates
chrLK032037:+:660941..663691
Molecular Weight (calculated)
50743.1 Da
IEP (calculated)
4.350
GRAVY (calculated)
-0.890
Length
457 amino acids
Sequence
(BLAST)
(BLAST)
001: MGDILSKLFE ARWKAIEKKL PVTLPAVTVE PREEKRAAVF VPPTKKRKMA SSPVRESVPE PVKALVMTAE ERHRLGRQLE SLLEELPAQI IDFLKKHSSN
101: GGEIAEDEIE IDIDVLSDEV LFSLKKLLDE HIQDKEAKQS NVEPCEIELP KGSGPSSSLL QRGNEMADEY VGGNEPPISR SSSDSESGSS EDQSDDAKPI
201: IQEGGSKIPE TTNSEAQRDE DTRIDDLLNG SESNGAPEQM DISTQQKPSS DETDGQPDGN TLENPVSSEK KYRAALLKNK FADIILKARE KTLPQQNSNK
301: GDPEKLRKER EELELKKKKE RARLQAEAEA AENARRQAEA EAAAEAAAES KRQREVEREA ARQALLKMEK TVEINENSRF LEDLEMLRSS VPEQLLSSVD
401: EISPERTLDA LGSFNLGGMN PLEQLGLYMK QDDDEDEPEA PPTVPKLATD VEEGEID
101: GGEIAEDEIE IDIDVLSDEV LFSLKKLLDE HIQDKEAKQS NVEPCEIELP KGSGPSSSLL QRGNEMADEY VGGNEPPISR SSSDSESGSS EDQSDDAKPI
201: IQEGGSKIPE TTNSEAQRDE DTRIDDLLNG SESNGAPEQM DISTQQKPSS DETDGQPDGN TLENPVSSEK KYRAALLKNK FADIILKARE KTLPQQNSNK
301: GDPEKLRKER EELELKKKKE RARLQAEAEA AENARRQAEA EAAAEAAAES KRQREVEREA ARQALLKMEK TVEINENSRF LEDLEMLRSS VPEQLLSSVD
401: EISPERTLDA LGSFNLGGMN PLEQLGLYMK QDDDEDEPEA PPTVPKLATD VEEGEID
001: MVESAAFPGG YYRNTFEAPE ESEGSGSSAQ IDTEVTASEN SSTPARKCIM LNSNDEDPYG VQRQVISLYN MSQSERKDLI YRLKLELEQT KIVLKNAELQ
101: RMNPAAVSST SDRVGFSTGQ KISSRVSNSK KPSDFAVGSG KKVRHQNGTS RGWNRGTSGK FESSKETMTS TPNITLMKQC DTLLRKLWSH PHSWVFQAPV
201: DVVKLNIPDY LTTIKHPMDL GTVKKNLASG VYSSPHEFAA DVRLTFTNAM TYNPPGHDVH IMGDILSKLF EARWKTIKKK LPPCSMQTLP AVTLEPNDER
301: KAAISVPPAK KRKMASPVRE SVPEPVKPLM TEVERHRLGR QLESLLDELP AHIIDFLKKH NSNGGEIAED EIEIDIDVLS DEVLVTLRNL LDEYIQNKEA
401: KQTNVEPCEI ELINGSRPSN SSLQRGNEMA DEYVDGNEPP ISRSSSDSDS GSSEDQSDDA KPMVQGDSSK MPETANSEAQ RDENTRIDDL FVGSQSTGAL
501: EQMDICSQQK LSSDESDGQH EGNILETPAS SEKRYRAALL KNRFADIILK AREKPLPQNG IKGDPERLRK EREELVLQKK KEKARLQAEA EAAEDARRQA
601: EAEAAAEAAA EAKRKRELER EAARQALLKM EKTVEINENS RFLEDLEMLS SSAPEQLPSS AEETSPERPL DALGSFNLRG SNPLEQLGLY MKQDDDEEEP
701: EAPAVPNLAN DVEEGEID
101: RMNPAAVSST SDRVGFSTGQ KISSRVSNSK KPSDFAVGSG KKVRHQNGTS RGWNRGTSGK FESSKETMTS TPNITLMKQC DTLLRKLWSH PHSWVFQAPV
201: DVVKLNIPDY LTTIKHPMDL GTVKKNLASG VYSSPHEFAA DVRLTFTNAM TYNPPGHDVH IMGDILSKLF EARWKTIKKK LPPCSMQTLP AVTLEPNDER
301: KAAISVPPAK KRKMASPVRE SVPEPVKPLM TEVERHRLGR QLESLLDELP AHIIDFLKKH NSNGGEIAED EIEIDIDVLS DEVLVTLRNL LDEYIQNKEA
401: KQTNVEPCEI ELINGSRPSN SSLQRGNEMA DEYVDGNEPP ISRSSSDSDS GSSEDQSDDA KPMVQGDSSK MPETANSEAQ RDENTRIDDL FVGSQSTGAL
501: EQMDICSQQK LSSDESDGQH EGNILETPAS SEKRYRAALL KNRFADIILK AREKPLPQNG IKGDPERLRK EREELVLQKK KEKARLQAEA EAAEDARRQA
601: EAEAAAEAAA EAKRKRELER EAARQALLKM EKTVEINENS RFLEDLEMLS SSAPEQLPSS AEETSPERPL DALGSFNLRG SNPLEQLGLY MKQDDDEEEP
701: EAPAVPNLAN DVEEGEID
Arabidopsis Description
GTE8Global transcription factor group E8 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LS77]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.