Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY16729 | Canola | nucleus | 75.34 | 58.32 |
| CDX84396 | Canola | nucleus | 39.48 | 56.93 |
| AT5G63320.1 | Thale cress | nucleus | 61.2 | 50.99 |
| VIT_17s0000g01830.t01 | Wine grape | nucleus | 36.09 | 42.25 |
| KRH57199 | Soybean | nucleus | 32.35 | 38.7 |
| KRH63729 | Soybean | nucleus | 33.71 | 38.06 |
| Solyc03g111090.2.1 | Tomato | nucleus | 33.48 | 37.9 |
| PGSC0003DMT400039290 | Potato | nucleus | 33.26 | 37.4 |
| KRH54219 | Soybean | nucleus | 33.26 | 37.31 |
| GSMUA_Achr8P01140_001 | Banana | nucleus | 31.22 | 36.75 |
| GSMUA_Achr8P08920_001 | Banana | nucleus | 25.57 | 34.77 |
| CDY20057 | Canola | nucleus | 25.0 | 34.26 |
| GSMUA_Achr10P... | Banana | nucleus | 23.53 | 32.6 |
| Zm00001d035167_P001 | Maize | nucleus | 27.83 | 32.45 |
| GSMUA_Achr2P20970_001 | Banana | nucleus | 25.91 | 31.81 |
| KXG24325 | Sorghum | nucleus | 25.45 | 31.78 |
| CDY13699 | Canola | nucleus | 16.29 | 31.51 |
| TraesCS7D01G309100.1 | Wheat | nucleus | 26.58 | 31.33 |
| TraesCS7A01G312700.2 | Wheat | nucleus | 26.47 | 31.2 |
| TraesCS6A01G214000.1 | Wheat | nucleus | 24.77 | 31.02 |
| Os02t0601800-03 | Rice | nucleus | 24.89 | 30.81 |
| TraesCS7B01G212400.2 | Wheat | nucleus | 26.13 | 30.8 |
| TraesCS6D01G196600.3 | Wheat | nucleus | 24.43 | 30.73 |
| TraesCS6B01G244000.2 | Wheat | plastid | 24.66 | 30.28 |
| HORVU6Hr1G054560.16 | Barley | nucleus | 24.32 | 30.07 |
| HORVU7Hr1G074620.7 | Barley | cytosol, mitochondrion, nucleus | 26.47 | 30.04 |
| EES07108 | Sorghum | nucleus | 23.98 | 29.82 |
| Zm00001d017126_P001 | Maize | nucleus | 23.42 | 29.74 |
| TraesCS3A01G087800.1 | Wheat | plastid | 20.48 | 29.67 |
| Zm00001d049638_P009 | Maize | nucleus | 25.68 | 29.21 |
| TraesCS3A01G122200.1 | Wheat | nucleus | 23.53 | 29.17 |
| CDX83673 | Canola | nucleus | 16.4 | 29.12 |
| TraesCS3D01G087900.4 | Wheat | nucleus | 23.53 | 29.05 |
| TraesCS3B01G141400.2 | Wheat | nucleus, plastid | 23.42 | 29.03 |
| TraesCS3D01G124100.1 | Wheat | nucleus | 23.42 | 29.03 |
| TraesCS3B01G103200.2 | Wheat | nucleus | 23.42 | 28.95 |
| GSMUA_Achr3P02660_001 | Banana | plasma membrane | 21.38 | 28.9 |
| HORVU3Hr1G022660.1 | Barley | nucleus | 23.08 | 28.65 |
| GSMUA_Achr3P02670_001 | Banana | nucleus | 21.27 | 26.67 |
| HORVU3Hr1G015760.1 | Barley | nucleus | 15.05 | 24.09 |
| CDX83890 | Canola | nucleus, plastid | 9.73 | 23.5 |
| CDX96751 | Canola | nucleus, plastid | 9.62 | 23.22 |
| CDY43984 | Canola | endoplasmic reticulum | 11.2 | 22.65 |
| CDY19175 | Canola | nucleus, plastid | 9.62 | 22.14 |
| CDY08771 | Canola | nucleus | 8.6 | 21.47 |
| CDY15568 | Canola | nucleus | 7.69 | 21.45 |
| CDY26215 | Canola | mitochondrion | 9.16 | 19.57 |
| CDX82103 | Canola | plastid | 6.9 | 19.49 |
| CDY48040 | Canola | nucleus, plastid | 8.6 | 19.39 |
| CDY65645 | Canola | nucleus, plastid | 10.63 | 18.47 |
| CDY66497 | Canola | nucleus | 2.83 | 16.13 |
| CDY26219 | Canola | nucleus | 3.17 | 15.05 |
| CDX70357 | Canola | plastid | 6.67 | 15.01 |
| CDX78390 | Canola | nucleus | 3.96 | 14.64 |
| CDY06203 | Canola | nucleus | 10.52 | 14.44 |
| CDY09981 | Canola | nucleus | 10.41 | 14.4 |
| CDY21732 | Canola | cytosol | 3.96 | 13.78 |
| CDX70356 | Canola | nucleus, plastid | 3.85 | 13.77 |
| CDX82101 | Canola | nucleus | 2.83 | 13.66 |
| CDY31648 | Canola | nucleus | 6.56 | 13.65 |
| CDX86532 | Canola | nucleus | 10.63 | 13.33 |
| CDX84278 | Canola | nucleus | 6.56 | 13.24 |
| CDX90608 | Canola | cytosol | 5.32 | 13.2 |
| CDY72432 | Canola | cytosol | 7.47 | 13.07 |
| CDY65656 | Canola | cytosol | 3.05 | 13.04 |
| CDY29075 | Canola | cytoskeleton, cytosol, nucleus | 5.32 | 12.91 |
| CDY68605 | Canola | cytosol | 7.47 | 12.02 |
| CDX81848 | Canola | cytosol, nucleus, plastid | 2.26 | 7.27 |
Protein Annotations
| Gene3D:1.20.920.10 | MapMan:15.5.54 | UniProt:A0A078IFP6 | InterPro:Bromodomain | InterPro:Bromodomain-like_sf | EnsemblPlants:CDY48139 |
| ProteinID:CDY48139 | ProteinID:CDY48139.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| EnsemblPlantsGene:GSBRNA2T00088936001 | InterPro:IPR001487 | InterPro:IPR036427 | PFAM:PF00439 | PRINTS:PR00503 | PFscan:PS50014 |
| PANTHER:PTHR22880 | PANTHER:PTHR22880:SF228 | SMART:SM00297 | SUPFAM:SSF47370 | UniParc:UPI0004EED946 | SEG:seg |
Description
BnaCnng15810DBnaCnng15810D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IFP6]
Coordinates
chrLK032755:-:108887..113611
Molecular Weight (calculated)
99277.6 Da
IEP (calculated)
4.281
GRAVY (calculated)
-1.040
Length
884 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKARKHSRG MQAVERDDFG YPRGTDSEME EEAPVSKRSR FSLNGGDRFG VPKEVLSLSN MLRSEREHLV HKLRMELEQV RELRRKVECF SSDKVMLSPY
101: SDLHSCSDGS RRMPTQGKKR RPLRNDKQRN VTTSSTVASL MKECQTLVDR LWSHKLGFPF RIPVDPVLLN IPDYFTVIKH PMDLGTIRSR LRNGEYSSPL
201: DFAADVRLTF SNSMAYNPPG NQYHKMARDL STLLSVFSDC FNSTLQPSKG DMLIDEDVDI IGGNDPPVSS HPPHKIDKDA ACRNNERSSS SSSSRDSGSS
301: SSDSDSCSSS RSETDFTKAS NPTSTEDKKE PGVDINGEKI VVNDSLNELC QVEHDVGEKS AAIDAVHVIP EEETAPCERQ DSPGKRQRAA LLKNRFADTI
401: MKAREKTLTK GEKGDPEKLR IEREKFEKRL REENLRLQAE AKAVEEARRK AKAEAAEKAR REREQEREAA RQALQKLEKT VEIDEGRRFM EDLEMLRATG
501: AEGDQLPTFM EEMSPKRSPD MLGSFKMEGN SNPLEQLGLY MKMDEDEDDE EDEPHFSQGE VDEQTLDRKE RLMLSPHGVE REDQLDNGNK KPASQRAQQD
601: GGNQEDEKSI NQKEGEEQIE NGPGDDETGI VDMVGVETEV VEMVKVDTEE VDMREQETEV VGNGEKETEV GGMGEQDNGI EDKGDEEAEM YNKDEETGIV
701: DMEGKETEVV DMVKADTEVV DMREQETEVV DMGEEGNEIG GMGEQENGIE DKGGEEAGIV DMGEEETEGV DIVKVETEVV DMREQETEAV DKVEKETEVV
801: VMGKKETDVV DSGEEETKVV HKREEETGVV ENGEEGNENG DNGDEETEAV QTREEEKVVG KGQEVSEALQ KREEESEVVE EQIE
101: SDLHSCSDGS RRMPTQGKKR RPLRNDKQRN VTTSSTVASL MKECQTLVDR LWSHKLGFPF RIPVDPVLLN IPDYFTVIKH PMDLGTIRSR LRNGEYSSPL
201: DFAADVRLTF SNSMAYNPPG NQYHKMARDL STLLSVFSDC FNSTLQPSKG DMLIDEDVDI IGGNDPPVSS HPPHKIDKDA ACRNNERSSS SSSSRDSGSS
301: SSDSDSCSSS RSETDFTKAS NPTSTEDKKE PGVDINGEKI VVNDSLNELC QVEHDVGEKS AAIDAVHVIP EEETAPCERQ DSPGKRQRAA LLKNRFADTI
401: MKAREKTLTK GEKGDPEKLR IEREKFEKRL REENLRLQAE AKAVEEARRK AKAEAAEKAR REREQEREAA RQALQKLEKT VEIDEGRRFM EDLEMLRATG
501: AEGDQLPTFM EEMSPKRSPD MLGSFKMEGN SNPLEQLGLY MKMDEDEDDE EDEPHFSQGE VDEQTLDRKE RLMLSPHGVE REDQLDNGNK KPASQRAQQD
601: GGNQEDEKSI NQKEGEEQIE NGPGDDETGI VDMVGVETEV VEMVKVDTEE VDMREQETEV VGNGEKETEV GGMGEQDNGI EDKGDEEAEM YNKDEETGIV
701: DMEGKETEVV DMVKADTEVV DMREQETEVV DMGEEGNEIG GMGEQENGIE DKGGEEAGIV DMGEEETEGV DIVKVETEVV DMREQETEAV DKVEKETEVV
801: VMGKKETDVV DSGEEETKVV HKREEETGVV ENGEEGNENG DNGDEETEAV QTREEEKVVG KGQEVSEALQ KREEESEVVE EQIE
0001: MGKARKHSRG RPSGFVPDYM QAVEPDEFVY SERMNSEASP PLKRRRFGLN GDNNGVSKEV LSLSKMSRSE RKNLVHKLKM ELQQVRDLSK KIASFSSDTV
0101: LLSPYNDHSC SDGPRRPPPE NFATFVGSQG KKRPPVRSDK QRNKKGPSRL NVPTSYTVAS VMKECETLLN RLWSHKSGWP FRTPVDPVML NIPDYFNVIK
0201: HPMDLGTIRS RLCKGEYSSP LDFAADVRLT FSNSIAYNPP GNQFHTMAQG ISKYFESGWK SIEKKIPMSK PPVIPLTSSA SLESEIPFEV APMRKKEAAM
0301: NDNKLRVEPA KLVMTDGEKK KLGQDLMALE EDFPQKIADL LREQSGSDGQ SGEGEIEIDI EALSDEILFM VRKLLDDYLR EKKKSMEKSE PCEMEIVHDS
0401: GFSNSPLQPS KGDLQIDEDV DIVGGNDPSV SSHPPLKIEK DAACRNNESS SSSSSSSESG SSSSDSDSCS SSGSETDSIK ASKPTSREEK KQPGVGIDKK
0501: EDDSNSEKIV VNDSLNELDQ LEHTVGEKST TMDAVVLVPD EETAPPERQI SPDSPDKRYR AAFLKNRFAD TIMKAREKAF TKGEKGDPEK LRIEREEFEK
0601: RLREEKERLQ AEAKAAEEAR RKAKAEAAEK ARREREQERE AARQALQKME KTVEINEGIR FMEDLQMLRA TGTEGDQLPT SMEVMSPKFS EDMLGLGSFK
0701: MESNSNPLEH LGLYMKMDED EDEEEDPPHF SQRKVEDNPF DRSEKQEHSP HRVEGEDQLV SGNEEPVSQE AHDNGDQEDG KPINPNEIER QLENMPEQES
0801: GVGDKEEQET EVVDMRKQEN EVVDMGVEEV HPLDRSEGRT LSPHRKERED PRASGNEESV SEKAQDYENQ RDEKINQSER EEQLENVLEQ ESSRDDDTGE
0901: QETEVVGVGK ELSLDKSEGQ TLSPHREEGE NQLDCGNEEL VSQKTQDNGN QEDEKSINKI EGEEQLANVP EQESRVTEKE EQETGVVDLG EQKSEVVEKG
1001: VEENEAVDNG EGVQGTEVSD KGGNETVVDG NGKVETEVVD KAGQKTDLVD QGEEDIDVEI D
0101: LLSPYNDHSC SDGPRRPPPE NFATFVGSQG KKRPPVRSDK QRNKKGPSRL NVPTSYTVAS VMKECETLLN RLWSHKSGWP FRTPVDPVML NIPDYFNVIK
0201: HPMDLGTIRS RLCKGEYSSP LDFAADVRLT FSNSIAYNPP GNQFHTMAQG ISKYFESGWK SIEKKIPMSK PPVIPLTSSA SLESEIPFEV APMRKKEAAM
0301: NDNKLRVEPA KLVMTDGEKK KLGQDLMALE EDFPQKIADL LREQSGSDGQ SGEGEIEIDI EALSDEILFM VRKLLDDYLR EKKKSMEKSE PCEMEIVHDS
0401: GFSNSPLQPS KGDLQIDEDV DIVGGNDPSV SSHPPLKIEK DAACRNNESS SSSSSSSESG SSSSDSDSCS SSGSETDSIK ASKPTSREEK KQPGVGIDKK
0501: EDDSNSEKIV VNDSLNELDQ LEHTVGEKST TMDAVVLVPD EETAPPERQI SPDSPDKRYR AAFLKNRFAD TIMKAREKAF TKGEKGDPEK LRIEREEFEK
0601: RLREEKERLQ AEAKAAEEAR RKAKAEAAEK ARREREQERE AARQALQKME KTVEINEGIR FMEDLQMLRA TGTEGDQLPT SMEVMSPKFS EDMLGLGSFK
0701: MESNSNPLEH LGLYMKMDED EDEEEDPPHF SQRKVEDNPF DRSEKQEHSP HRVEGEDQLV SGNEEPVSQE AHDNGDQEDG KPINPNEIER QLENMPEQES
0801: GVGDKEEQET EVVDMRKQEN EVVDMGVEEV HPLDRSEGRT LSPHRKERED PRASGNEESV SEKAQDYENQ RDEKINQSER EEQLENVLEQ ESSRDDDTGE
0901: QETEVVGVGK ELSLDKSEGQ TLSPHREEGE NQLDCGNEEL VSQKTQDNGN QEDEKSINKI EGEEQLANVP EQESRVTEKE EQETGVVDLG EQKSEVVEKG
1001: VEENEAVDNG EGVQGTEVSD KGGNETVVDG NGKVETEVVD KAGQKTDLVD QGEEDIDVEI D
Arabidopsis Description
GTE10NPX1 [Source:UniProtKB/TrEMBL;Acc:A0A178UIE5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.