Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d017101_P001 | |
| Zm00001d025707_P001 | |
| Zm00001d042443_P001 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES07108 | Sorghum | nucleus | 92.96 | 91.0 |
| Os02t0601800-03 | Rice | nucleus | 80.03 | 78.01 |
| TraesCS6D01G196600.3 | Wheat | nucleus | 76.87 | 76.1 |
| TraesCS6A01G214000.1 | Wheat | nucleus | 76.87 | 75.78 |
| TraesCS6B01G244000.2 | Wheat | plastid | 76.87 | 74.31 |
| HORVU3Hr1G015760.1 | Barley | nucleus | 58.76 | 74.09 |
| HORVU6Hr1G054560.16 | Barley | nucleus | 76.01 | 73.99 |
| TraesCS3D01G087900.4 | Wheat | nucleus | 76.01 | 73.88 |
| TraesCS3B01G103200.2 | Wheat | nucleus | 75.43 | 73.43 |
| TraesCS3A01G087800.1 | Wheat | plastid | 63.94 | 72.95 |
| TraesCS3D01G124100.1 | Wheat | nucleus | 73.28 | 71.53 |
| TraesCS3A01G122200.1 | Wheat | nucleus | 73.28 | 71.53 |
| HORVU3Hr1G022660.1 | Barley | nucleus | 73.13 | 71.49 |
| TraesCS3B01G141400.2 | Wheat | nucleus, plastid | 72.56 | 70.83 |
| VIT_17s0000g01830.t01 | Wine grape | nucleus | 46.55 | 42.91 |
| Bra038624.1-P | Field mustard | nucleus | 14.51 | 41.74 |
| VIT_14s0171g00380.t01 | Wine grape | nucleus | 43.53 | 41.11 |
| GSMUA_Achr8P08920_001 | Banana | nucleus | 38.36 | 41.08 |
| GSMUA_Achr8P01140_001 | Banana | nucleus | 44.25 | 41.01 |
| Zm00001d021185_P001 | Maize | cytosol, nucleus, plastid | 4.45 | 39.74 |
| Bra025262.1-P | Field mustard | nucleus | 30.89 | 39.74 |
| KRH63729 | Soybean | nucleus | 44.25 | 39.34 |
| KRH54219 | Soybean | nucleus | 43.53 | 38.45 |
| GSMUA_Achr10P... | Banana | nucleus | 35.2 | 38.4 |
| KRH07021 | Soybean | nucleus | 40.66 | 38.04 |
| Bra039088.1-P | Field mustard | nucleus | 35.49 | 37.94 |
| KRH57199 | Soybean | nucleus | 40.09 | 37.75 |
| KRG94435 | Soybean | nucleus | 40.23 | 37.74 |
| CDY20057 | Canola | nucleus | 34.91 | 37.67 |
| Solyc03g111090.2.1 | Tomato | nucleus | 41.81 | 37.26 |
| PGSC0003DMT400039290 | Potato | nucleus | 41.67 | 36.9 |
| GSMUA_Achr2P20970_001 | Banana | nucleus | 37.64 | 36.39 |
| AT3G01770.1 | Thale cress | nucleus | 32.33 | 36.29 |
| PGSC0003DMT400052108 | Potato | nucleus | 37.5 | 35.8 |
| CDY13699 | Canola | nucleus | 23.13 | 35.23 |
| Solyc02g093880.2.1 | Tomato | nucleus | 36.64 | 35.17 |
| GSMUA_Achr3P02660_001 | Banana | plasma membrane | 33.05 | 35.17 |
| AT5G14270.2 | Thale cress | nucleus | 34.2 | 34.54 |
| Zm00001d035167_P001 | Maize | nucleus | 37.36 | 34.3 |
| KRH07022 | Soybean | nucleus | 38.07 | 33.72 |
| GSMUA_Achr3P02670_001 | Banana | nucleus | 33.62 | 33.19 |
| CDX83673 | Canola | nucleus | 22.99 | 32.13 |
| Zm00001d049638_P009 | Maize | nucleus | 35.2 | 31.53 |
| AT3G27260.3 | Thale cress | nucleus | 37.21 | 31.51 |
| CDX84396 | Canola | nucleus | 27.73 | 31.48 |
| Zm00001d002267_P001 | Maize | plastid | 16.38 | 25.28 |
| Zm00001d004790_P008 | Maize | nucleus | 20.69 | 24.91 |
| Zm00001d049400_P001 | Maize | plastid | 17.24 | 24.79 |
| Zm00001d008922_P001 | Maize | plastid | 17.39 | 24.69 |
| AT5G63320.1 | Thale cress | nucleus | 37.5 | 24.6 |
| Zm00001d053022_P001 | Maize | nucleus | 20.83 | 23.65 |
| Zm00001d026333_P001 | Maize | cytosol | 15.95 | 23.57 |
| CDY48139 | Canola | nucleus | 29.74 | 23.42 |
| Zm00001d024251_P001 | Maize | cytosol | 16.09 | 23.0 |
| Zm00001d036092_P004 | Maize | endoplasmic reticulum, nucleus, plastid | 11.49 | 21.92 |
| Zm00001d046528_P001 | Maize | cytosol | 4.02 | 18.67 |
| CDY16729 | Canola | nucleus | 30.17 | 18.39 |
| Zm00001d016131_P006 | Maize | nucleus | 17.39 | 18.03 |
| Bra035848.1-P | Field mustard | nucleus | 30.17 | 17.63 |
| Zm00001d053427_P007 | Maize | nucleus | 13.94 | 14.2 |
| Zm00001d039369_P004 | Maize | plastid | 17.39 | 12.91 |
Protein Annotations
| Gene3D:1.20.1270.220 | Gene3D:1.20.920.10 | MapMan:15.5.54 | UniProt:A0A1D6HCG5 | ProteinID:AQK72392.1 | InterPro:Bromodomain |
| InterPro:Bromodomain-like_sf | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:GTE_bromo |
| InterPro:IPR001487 | InterPro:IPR027353 | InterPro:IPR036427 | InterPro:IPR038336 | InterPro:NET_dom | InterPro:NET_sf |
| PFAM:PF00439 | PFAM:PF17035 | PRINTS:PR00503 | PFscan:PS50014 | PFscan:PS51525 | PANTHER:PTHR22880 |
| PANTHER:PTHR22880:SF231 | SMART:SM00297 | SUPFAM:SSF47370 | UniParc:UPI000220AAD4 | EnsemblPlantsGene:Zm00001d017126 | EnsemblPlants:Zm00001d017126_P001 |
| EnsemblPlants:Zm00001d017126_T001 | SEG:seg | : | : | : | : |
Description
Transcription factor GTE8
Coordinates
chr5:-:186218474..186226285
Molecular Weight (calculated)
76606.9 Da
IEP (calculated)
5.251
GRAVY (calculated)
-0.725
Length
696 amino acids
Sequence
(BLAST)
(BLAST)
001: MTPTVLMEFG QQRPMKRGYE EMVFRAASSR GYAETVGESG VAAGSPLRVD SEDSSVPKRK CISLNSVGFD VKREILVPSK MSSSERRYLR KRFRAELDSV
101: RDLLKKPEFA APVPLNRAPA LSSSAAPRAK KPQKSQRGGT NVIRGAKGRF LPTKPRPETS TVLSEAAAFK QCEAILKKLM TQKYSHIFNV PVDIVKLQIP
201: DYFDIVKTPM DLGTVKKKLE SGSYTSPSDF AADVRLTFNN AMAYNPRGHA VHDMAIQLNK MFESRWRPIE KKLASAATEK HVEVDRADSK RRKTPPVDRS
301: DVSMECARQT EPETPKMTAE EREAFGNCLA SISDELPPHI FELLQQCIDS NADLSGDGEI EIDIHAVSDD LLFELKKHVD KYLQEKEQSQ QVKSEPSENE
401: AVNVSGLSHS STNPCKGGEP IEEDVDICGN ASPIMLDKDA QIRNSKCGSP SSSSSDSESS SSDSDSGSDS ESESEKVGSP GKLAKGTKKP DQLVEQEKSD
501: VISPADANRP AAIVGLHGED SESKPAPGGE NSEPDTQVSP DRLLRAALLR SRYADVIVKA RGILSQGGDK QEELEKLQKE EKERLLAEGT AAMEACRAEA
601: EAEKKRKRNF EREKARQALQ EMERTVEIND NLHLKDLELL GTATTEHIVS SVDETSPERS HDGMAGYHPG AVNPLEQLGL FIKVDDEEDD EQCSLH
101: RDLLKKPEFA APVPLNRAPA LSSSAAPRAK KPQKSQRGGT NVIRGAKGRF LPTKPRPETS TVLSEAAAFK QCEAILKKLM TQKYSHIFNV PVDIVKLQIP
201: DYFDIVKTPM DLGTVKKKLE SGSYTSPSDF AADVRLTFNN AMAYNPRGHA VHDMAIQLNK MFESRWRPIE KKLASAATEK HVEVDRADSK RRKTPPVDRS
301: DVSMECARQT EPETPKMTAE EREAFGNCLA SISDELPPHI FELLQQCIDS NADLSGDGEI EIDIHAVSDD LLFELKKHVD KYLQEKEQSQ QVKSEPSENE
401: AVNVSGLSHS STNPCKGGEP IEEDVDICGN ASPIMLDKDA QIRNSKCGSP SSSSSDSESS SSDSDSGSDS ESESEKVGSP GKLAKGTKKP DQLVEQEKSD
501: VISPADANRP AAIVGLHGED SESKPAPGGE NSEPDTQVSP DRLLRAALLR SRYADVIVKA RGILSQGGDK QEELEKLQKE EKERLLAEGT AAMEACRAEA
601: EAEKKRKRNF EREKARQALQ EMERTVEIND NLHLKDLELL GTATTEHIVS SVDETSPERS HDGMAGYHPG AVNPLEQLGL FIKVDDEEDD EQCSLH
001: MTERNGGFPG DYCFEAPGGD YDEGSDSPRV SEGSNCSKRK VGETFGVSKM VLPLSGLSSS DRKELIRRLR QELEQIRVFQ KNFELSRTVA LTSSSASGLT
101: RVKSFGMSRC STGPGKTVNP ISAASKPTPV TTAVMLLMKQ CEALLKRLMS HQYGWVFNTP VDVVKLNILD YFNVIEHPMD LGTVKNKLTS GTYSCPSEFA
201: ADVRLTFSNA MTYNPPGNDV YVMADTLRKF FEVRWKTLEK KLSGTKVHTE PSNLDAHKEK HIVIPVPMAK KRKTTAVDCE NVVDPAKRVM TDEDRLKLGK
301: DLESLTEFPA QLINFLRDHN SNEGGIGDDE IEIDINDLSD HALFQLRDLL DEHLREIQNK KSSVEPCEIE LLHGSVPGNS SMQHCDGSEL DDEVVDIGEN
401: EHPTSSISPV TIEKDLVLGN SNGNSLGSVS GDPKMSSLPR ASKGLGTIDL EPMLDGATSA SPTRGSSVGG LDQLESASPE KISSVEADCQ QDGNSAQNEK
501: QLPPEKSYRA AILKNRFADI ILKAREKPLN QNDTRDPEKL QREREELELQ KKKEKARLQA EAKAAEEARR KAEAQAAAEA AAEAKRKLEL EREAARQALM
601: EMEQSVELNE NAKFLEDLEL LKTVDTDHLT NTIEEEDGPD VGLRSFSFGG SNPLEQLGLF MKQDEDEEEA DPLTSPAPEI DIEEGEID
101: RVKSFGMSRC STGPGKTVNP ISAASKPTPV TTAVMLLMKQ CEALLKRLMS HQYGWVFNTP VDVVKLNILD YFNVIEHPMD LGTVKNKLTS GTYSCPSEFA
201: ADVRLTFSNA MTYNPPGNDV YVMADTLRKF FEVRWKTLEK KLSGTKVHTE PSNLDAHKEK HIVIPVPMAK KRKTTAVDCE NVVDPAKRVM TDEDRLKLGK
301: DLESLTEFPA QLINFLRDHN SNEGGIGDDE IEIDINDLSD HALFQLRDLL DEHLREIQNK KSSVEPCEIE LLHGSVPGNS SMQHCDGSEL DDEVVDIGEN
401: EHPTSSISPV TIEKDLVLGN SNGNSLGSVS GDPKMSSLPR ASKGLGTIDL EPMLDGATSA SPTRGSSVGG LDQLESASPE KISSVEADCQ QDGNSAQNEK
501: QLPPEKSYRA AILKNRFADI ILKAREKPLN QNDTRDPEKL QREREELELQ KKKEKARLQA EAKAAEEARR KAEAQAAAEA AAEAKRKLEL EREAARQALM
601: EMEQSVELNE NAKFLEDLEL LKTVDTDHLT NTIEEEDGPD VGLRSFSFGG SNPLEQLGLF MKQDEDEEEA DPLTSPAPEI DIEEGEID
Arabidopsis Description
BET9Bromodomain and extraterminal domain protein 9 [Source:UniProtKB/TrEMBL;Acc:F4K6Q7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.