Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU84709 | Sorghum | nucleus | 91.21 | 85.96 |
| Zm00001d053427_P007 | Maize | nucleus | 83.16 | 81.7 |
| Os02t0250300-01 | Rice | nucleus | 70.49 | 72.1 |
| HORVU6Hr1G045030.1 | Barley | nucleus | 67.36 | 71.41 |
| HORVU6Hr1G045070.4 | Barley | nucleus | 67.51 | 71.23 |
| TraesCS6D01G177700.1 | Wheat | cytosol, plastid | 66.92 | 70.71 |
| GSMUA_Achr11P... | Banana | nucleus | 33.83 | 53.66 |
| CDY15568 | Canola | nucleus | 25.19 | 53.31 |
| CDY66497 | Canola | nucleus | 11.18 | 48.39 |
| Zm00001d008922_P001 | Maize | plastid | 35.17 | 48.16 |
| KRH22304 | Soybean | nucleus | 42.92 | 45.0 |
| KRH27020 | Soybean | nucleus | 42.47 | 44.12 |
| CDX83890 | Canola | nucleus, plastid | 23.99 | 43.99 |
| PGSC0003DMT400027387 | Potato | nucleus | 37.56 | 43.75 |
| VIT_19s0014g01650.t01 | Wine grape | nucleus | 38.6 | 43.38 |
| CDX96751 | Canola | nucleus, plastid | 23.55 | 43.17 |
| CDY26219 | Canola | nucleus | 11.92 | 43.01 |
| Solyc10g008070.2.1 | Tomato | nucleus | 22.95 | 42.54 |
| CDY19175 | Canola | nucleus, plastid | 24.14 | 42.19 |
| VIT_12s0028g02510.t01 | Wine grape | nucleus | 40.98 | 42.05 |
| CDY26215 | Canola | mitochondrion | 24.89 | 40.34 |
| CDY48040 | Canola | nucleus, plastid | 23.55 | 40.31 |
| PGSC0003DMT400061991 | Potato | cytoskeleton, cytosol, nucleus | 18.63 | 40.19 |
| Bra025948.1-P | Field mustard | mitochondrion | 24.74 | 40.1 |
| Bra008074.1-P | Field mustard | nucleus, plastid | 23.4 | 40.05 |
| CDY06203 | Canola | nucleus | 38.3 | 39.91 |
| CDX82103 | Canola | plastid | 18.33 | 39.3 |
| CDY09981 | Canola | nucleus | 37.26 | 39.12 |
| Bra031004.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 20.57 | 38.87 |
| AT1G73150.1 | Thale cress | plastid | 26.68 | 38.83 |
| Bra032431.1-P | Field mustard | nucleus | 37.7 | 38.51 |
| Bra016586.1-P | Field mustard | nucleus, plastid | 25.19 | 38.41 |
| CDX82101 | Canola | nucleus | 10.43 | 38.25 |
| Solyc12g014170.1.1 | Tomato | nucleus | 38.75 | 37.09 |
| PGSC0003DMT400039787 | Potato | nucleus | 38.75 | 36.93 |
| CDY21732 | Canola | cytosol | 13.86 | 36.61 |
| AT1G17790.1 | Thale cress | nucleus, plastid | 26.53 | 36.55 |
| PGSC0003DMT400032373 | Potato | nucleus | 39.49 | 35.76 |
| CDX86532 | Canola | nucleus | 37.26 | 35.46 |
| Bra015485.1-P | Field mustard | nucleus | 39.49 | 35.38 |
| Solyc07g062660.2.1 | Tomato | nucleus | 38.15 | 34.04 |
| Bra030643.1-P | Field mustard | nucleus | 37.41 | 33.96 |
| AT1G06230.2 | Thale cress | nucleus | 37.85 | 33.16 |
| KRH25703 | Soybean | nucleus | 41.73 | 32.04 |
| Zm00001d002267_P001 | Maize | plastid | 21.31 | 31.71 |
| Zm00001d049400_P001 | Maize | plastid | 21.01 | 29.13 |
| CDY68605 | Canola | cytosol | 23.7 | 28.96 |
| KRH55813 | Soybean | nucleus | 41.73 | 28.43 |
| CDY72432 | Canola | cytosol | 21.31 | 28.32 |
| Zm00001d026333_P001 | Maize | cytosol | 19.82 | 28.24 |
| CDX81848 | Canola | cytosol, nucleus, plastid | 11.48 | 28.0 |
| Zm00001d024251_P001 | Maize | cytosol | 20.27 | 27.93 |
| Zm00001d046528_P001 | Maize | cytosol | 6.11 | 27.33 |
| Zm00001d039369_P004 | Maize | plastid | 33.38 | 23.91 |
| Zm00001d036092_P004 | Maize | endoplasmic reticulum, nucleus, plastid | 12.22 | 22.47 |
| Zm00001d035167_P001 | Maize | nucleus | 19.97 | 17.68 |
| Zm00001d017126_P001 | Maize | nucleus | 18.03 | 17.39 |
| Zm00001d049638_P009 | Maize | nucleus | 18.93 | 16.34 |
| Zm00001d004790_P008 | Maize | nucleus | 12.07 | 14.01 |
| Zm00001d053022_P001 | Maize | nucleus | 11.48 | 12.56 |
| Zm00001d021185_P001 | Maize | cytosol, nucleus, plastid | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.20.1270.220 | Gene3D:1.20.920.10 | EntrezGene:103626987 | MapMan:15.5.54 | UniProt:A0A1D6H5K1 | ProteinID:AQK70104.1 |
| InterPro:Bromodomain | InterPro:Bromodomain-like_sf | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:GTE_bromo | InterPro:IPR001487 | InterPro:IPR027353 | InterPro:IPR036427 | InterPro:IPR038336 | InterPro:NET_dom |
| InterPro:NET_sf | PFAM:PF00439 | PFAM:PF17035 | PRINTS:PR00503 | PFscan:PS50014 | PFscan:PS51525 |
| PANTHER:PTHR22880 | PANTHER:PTHR22880:SF147 | SMART:SM00297 | SUPFAM:SSF47370 | UniParc:UPI000222114B | EnsemblPlantsGene:Zm00001d016131 |
| EnsemblPlants:Zm00001d016131_P006 | EnsemblPlants:Zm00001d016131_T006 | SEG:seg | : | : | : |
Description
Transcription factor GTE4
Coordinates
chr5:-:145812653..145818390
Molecular Weight (calculated)
73551.8 Da
IEP (calculated)
10.102
GRAVY (calculated)
-0.768
Length
671 amino acids
Sequence
(BLAST)
(BLAST)
001: MASDPPGDGA GGEEPTPGPA PAVEVLAAPA VPLRPRWATE IKVYTRKHPR KTPKPPPEPA PAPASVPAPA LAPAPAPNPL SETLSSIRRS IRRADTVGAA
101: ARPDPAAPAS VPARGPPGER GAASGDPSSE VNRVGGGISN GHGDDRAAAA AEKSEKARKR RVRSELRRRL AGELDQVRVL SKRLKEAAEA LAQQEASEPA
201: PLPMVVLPTQ QQVVDAGYVQ LQFSAGDMAV PMSAQIAAAV TPARSMLQRR PLTVSVVHNE AFEKVKRTPK ANQLYQNSEF LLAKDRIPPS DSHVRKKSKH
301: HKKKHRSLES RGADFDAERR LYSHAFKKSS SLLSRLMKHK FGWVFNKPVD PVALGLHDYF TIIKHPMDLG TIRGRLSRGQ YRNPKEFAED VRLTFHNAMT
401: YNPKGQDVHF MAEQLSGIFE AQWPEIEAEV NYLASCPPLP KKFPPPPIDL HFLERSDSMR HHMALDTNSR PISHTPTYTR TPSMKKPRAK DPNKRDMTID
501: EKRKLSENLQ NLPPEKLDAV VQVIKNKNLS VMQHDDEIEV EIDSMDAETL WELDRFVANY KKNLSKQKRK AERAMLARQD AELRAQRLIQ QPQPTPVPQE
601: PVGEKSLKQV AKDSLAGEQL PTSASEKNDE NRQNVSGSSN SSSSSSDSGS SSSDSDSDSS SSDGSDAANS S
101: ARPDPAAPAS VPARGPPGER GAASGDPSSE VNRVGGGISN GHGDDRAAAA AEKSEKARKR RVRSELRRRL AGELDQVRVL SKRLKEAAEA LAQQEASEPA
201: PLPMVVLPTQ QQVVDAGYVQ LQFSAGDMAV PMSAQIAAAV TPARSMLQRR PLTVSVVHNE AFEKVKRTPK ANQLYQNSEF LLAKDRIPPS DSHVRKKSKH
301: HKKKHRSLES RGADFDAERR LYSHAFKKSS SLLSRLMKHK FGWVFNKPVD PVALGLHDYF TIIKHPMDLG TIRGRLSRGQ YRNPKEFAED VRLTFHNAMT
401: YNPKGQDVHF MAEQLSGIFE AQWPEIEAEV NYLASCPPLP KKFPPPPIDL HFLERSDSMR HHMALDTNSR PISHTPTYTR TPSMKKPRAK DPNKRDMTID
501: EKRKLSENLQ NLPPEKLDAV VQVIKNKNLS VMQHDDEIEV EIDSMDAETL WELDRFVANY KKNLSKQKRK AERAMLARQD AELRAQRLIQ QPQPTPVPQE
601: PVGEKSLKQV AKDSLAGEQL PTSASEKNDE NRQNVSGSSN SSSSSSDSGS SSSDSDSDSS SSDGSDAANS S
001: MASEPVNGGE GIDGAREKQI IKVYKRKGKG QRKQSSFFAL EAAIEKPEGL LENENDNNDV SPAETLAPEF EDPIVVVKNS IEEAALGTNS HGDKNLTEAP
101: SENLPGDDSD KVIDKPLVEA FSQAQPQDDA SLAAMDKSEE VPSQIPKAQD DVNTVVVDEN SIKEPPKSLA QEDVTTVIVD KNPIEAPSQT LSLEDGDTLV
201: VDKNPIEVSS EEDVHVIDAD NLIKEAHPEN FVERDTTDAQ QPAGLTSDSA HATAAGSMPM EEDADGRIRI HVASTTKQQK EEIRKKLEDQ LNVVRGMVKK
301: IEDKEGEIGA YNDSRVLINT GINNGGGRIL SGFASAGLPR EVIRAPRPVN QLSISVLENT QGVNEHVEKE KRTPKANQFY RNSEFLLGDK LPPAESNKKS
401: KSSSKKQGGD VGHGFGAGTK VFKNCSALLE RLMKHKHGWV FNAPVDVKGL GLLDYYTIIE HPMDLGTIKS ALMKNLYKSP REFAEDVRLT FHNAMTYNPE
501: GQDVHLMAVT LLQIFEERWA VIEADYNREM RFVTGYEMNL PTPTMRSRLG PTMPPPPINV RNTIDRADWS NRQPTTTPGR TPTSATPSGR TPALKKPKAN
601: EPNKRDMTYE EKQKLSGHLQ NLPPDKLDAI VQIVNKRNTA VKLRDEEIEV DIDSVDPETL WELDRFVTNY KKGLSKKKRK AELAIQARAE AERNSQQQMA
701: PAPAAHEFSR EGGNTAKKTL PTPLPSQVEK QNNETSRSSS SSSSSSSSSS SDSDSDSSSS SGSDQT
101: SENLPGDDSD KVIDKPLVEA FSQAQPQDDA SLAAMDKSEE VPSQIPKAQD DVNTVVVDEN SIKEPPKSLA QEDVTTVIVD KNPIEAPSQT LSLEDGDTLV
201: VDKNPIEVSS EEDVHVIDAD NLIKEAHPEN FVERDTTDAQ QPAGLTSDSA HATAAGSMPM EEDADGRIRI HVASTTKQQK EEIRKKLEDQ LNVVRGMVKK
301: IEDKEGEIGA YNDSRVLINT GINNGGGRIL SGFASAGLPR EVIRAPRPVN QLSISVLENT QGVNEHVEKE KRTPKANQFY RNSEFLLGDK LPPAESNKKS
401: KSSSKKQGGD VGHGFGAGTK VFKNCSALLE RLMKHKHGWV FNAPVDVKGL GLLDYYTIIE HPMDLGTIKS ALMKNLYKSP REFAEDVRLT FHNAMTYNPE
501: GQDVHLMAVT LLQIFEERWA VIEADYNREM RFVTGYEMNL PTPTMRSRLG PTMPPPPINV RNTIDRADWS NRQPTTTPGR TPTSATPSGR TPALKKPKAN
601: EPNKRDMTYE EKQKLSGHLQ NLPPDKLDAI VQIVNKRNTA VKLRDEEIEV DIDSVDPETL WELDRFVTNY KKGLSKKKRK AELAIQARAE AERNSQQQMA
701: PAPAAHEFSR EGGNTAKKTL PTPLPSQVEK QNNETSRSSS SSSSSSSSSS SDSDSDSSSS SGSDQT
Arabidopsis Description
GTE4Transcription factor GTE4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNC4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.