Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU6Hr1G045030.1 | Barley | nucleus | 71.65 | 74.25 |
| TraesCS6D01G177700.1 | Wheat | cytosol, plastid | 71.49 | 73.86 |
| HORVU6Hr1G045070.4 | Barley | nucleus | 71.49 | 73.74 |
| Zm00001d016131_P006 | Maize | nucleus | 72.1 | 70.49 |
| OQU84709 | Sorghum | nucleus | 72.87 | 67.13 |
| Zm00001d053427_P007 | Maize | nucleus | 65.85 | 63.25 |
| CDY15568 | Canola | nucleus | 26.68 | 55.2 |
| GSMUA_Achr11P... | Banana | nucleus | 33.84 | 52.48 |
| CDY66497 | Canola | nucleus | 11.43 | 48.39 |
| Os01t0214300-01 | Rice | cytosol, nucleus | 11.74 | 46.39 |
| VIT_19s0014g01650.t01 | Wine grape | nucleus | 41.31 | 45.39 |
| KRH22304 | Soybean | nucleus | 43.9 | 45.0 |
| KRH27020 | Soybean | nucleus | 44.21 | 44.89 |
| CDX83890 | Canola | nucleus, plastid | 25.0 | 44.81 |
| CDX96751 | Canola | nucleus, plastid | 24.54 | 43.99 |
| PGSC0003DMT400027387 | Potato | nucleus | 38.57 | 43.92 |
| Solyc10g008070.2.1 | Tomato | nucleus | 24.24 | 43.92 |
| CDY26219 | Canola | nucleus | 12.35 | 43.55 |
| VIT_12s0028g02510.t01 | Wine grape | nucleus | 42.68 | 42.81 |
| CDY19175 | Canola | nucleus, plastid | 24.7 | 42.19 |
| CDY06203 | Canola | nucleus | 40.09 | 40.84 |
| Bra008074.1-P | Field mustard | nucleus, plastid | 24.39 | 40.82 |
| CDY48040 | Canola | nucleus, plastid | 24.24 | 40.56 |
| CDY26215 | Canola | mitochondrion | 25.46 | 40.34 |
| Bra025948.1-P | Field mustard | mitochondrion | 25.3 | 40.1 |
| CDX82103 | Canola | plastid | 19.05 | 39.94 |
| PGSC0003DMT400061991 | Potato | cytoskeleton, cytosol, nucleus | 18.75 | 39.55 |
| CDY09981 | Canola | nucleus | 38.41 | 39.44 |
| CDX82101 | Canola | nucleus | 10.98 | 39.34 |
| Bra032431.1-P | Field mustard | nucleus | 39.33 | 39.27 |
| Bra031004.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 21.04 | 38.87 |
| Bra016586.1-P | Field mustard | nucleus, plastid | 25.91 | 38.64 |
| AT1G73150.1 | Thale cress | plastid | 26.98 | 38.39 |
| AT1G17790.1 | Thale cress | nucleus, plastid | 27.74 | 37.37 |
| CDY21732 | Canola | cytosol | 14.33 | 37.01 |
| Solyc12g014170.1.1 | Tomato | nucleus | 39.48 | 36.95 |
| PGSC0003DMT400039787 | Potato | nucleus | 39.02 | 36.36 |
| Bra015485.1-P | Field mustard | nucleus | 41.31 | 36.18 |
| CDX86532 | Canola | nucleus | 38.87 | 36.17 |
| Os01t0648700-01 | Rice | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole | 12.8 | 35.29 |
| PGSC0003DMT400032373 | Potato | nucleus | 39.48 | 34.95 |
| Bra030643.1-P | Field mustard | nucleus | 38.87 | 34.51 |
| Os04t0622800-00 | Rice | cytosol | 16.16 | 34.08 |
| AT1G06230.2 | Thale cress | nucleus | 39.79 | 34.07 |
| Solyc07g062660.2.1 | Tomato | nucleus | 38.11 | 33.24 |
| KRH25703 | Soybean | nucleus | 43.29 | 32.49 |
| Os08t0192800-01 | Rice | nucleus | 23.17 | 31.6 |
| Os04t0623100-01 | Rice | cytosol, mitochondrion, nucleus, plastid | 21.65 | 31.14 |
| CDY68605 | Canola | cytosol | 25.15 | 30.05 |
| CDY72432 | Canola | cytosol | 23.02 | 29.9 |
| KRH55813 | Soybean | nucleus | 43.75 | 29.14 |
| CDX81848 | Canola | cytosol, nucleus, plastid | 12.04 | 28.73 |
| Os06t0138000-01 | Rice | cytosol, nucleus | 4.42 | 23.39 |
| Os02t0601800-03 | Rice | nucleus | 19.97 | 18.35 |
| Os07t0507700-01 | Rice | nucleus | 14.18 | 15.47 |
| Os08t0127300-01 | Rice | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.20.1270.220 | Gene3D:1.20.920.10 | MapMan:15.5.54 | EntrezGene:4328885 | UniProt:A3A538 | ProteinID:BAS77909.1 |
| InterPro:Bromodomain | InterPro:Bromodomain-like_sf | ncoils:Coil | ProteinID:EAZ22427.1 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:GTE_bromo | InterPro:IPR001487 | InterPro:IPR027353 | InterPro:IPR036427 | InterPro:IPR038336 |
| InterPro:NET_dom | InterPro:NET_sf | EnsemblPlantsGene:Os02g0250300 | EnsemblPlants:Os02t0250300-01 | PFAM:PF00439 | PFAM:PF17035 |
| PRINTS:PR00503 | PFscan:PS50014 | PFscan:PS51525 | PANTHER:PTHR22880 | PANTHER:PTHR22880:SF147 | SMART:SM00297 |
| SUPFAM:SSF47370 | UniParc:UPI0000DF0638 | RefSeq:XP_015626507.1 | RefSeq:XP_015626509.1 | SEG:seg | : |
Description
GENERAL TRANSCRIPTION FACTOR GROUP E4Bromodomain containing protein. (Os02t0250300-01)
Coordinates
chr2:+:8490392..8498003
Molecular Weight (calculated)
71480.0 Da
IEP (calculated)
10.010
GRAVY (calculated)
-0.764
Length
656 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSPPGAGA GGEERPAASP AAPAVAEAVE EGPVTSRWAP EIRVYRRKYP RKNPKPPPNP SPSSSPLAQT LASIRRSIRR PEDGPAAPRP DPPAAPASSP
101: HPPPPSAPVA PAQQGEPAAP ASDDVSAGPN RDGGAVPNGH GDVRAAAEEK ARKRRARSEL RRQLASELDQ VRGLSKRLKA AAEAIAAESA AALALPVVVP
201: PPQLPVGYAH SQFALADPVT PIPGQVAGAI VPVRSVMQRG PLTVSVTHTE SFEKEKRTPK ANQLYQNSEF LLAKDKFPPS DSHGRKKPKH HKKKHRSLAS
301: HGAGYDAEQR LYSHAFKKSM SLLSRLMKHK FGWVFNKPVD AVALGLHDYF AIIKHPMDLG TIKTRLTHGQ YRNPREFADD VRLTFHNAMT YNPKGQDVHF
401: MAEQLLGIFE AQWPEIEAEV QYLASCPPLP NKFPPPPIDV RFLDRSDSVK HHMVLDSKSR PLSHTPTYSA RTPSMKKPKA KDPDKRDMTI DEKRKLSNNL
501: QNLPPEKLDV VVQIIKNKNL SVRQHDDEIE VEIDSMDTET LWELDRFVAN YKKNLSKQKR KAERAMLARQ DAELHAQHVA PQQPSQEPNI GVKSPKQNLI
601: VDEKLATSVP EQADNNGQNA SRSSSSSSSS SDTGSSSSDS DSDSSSSDGS DAANSS
101: HPPPPSAPVA PAQQGEPAAP ASDDVSAGPN RDGGAVPNGH GDVRAAAEEK ARKRRARSEL RRQLASELDQ VRGLSKRLKA AAEAIAAESA AALALPVVVP
201: PPQLPVGYAH SQFALADPVT PIPGQVAGAI VPVRSVMQRG PLTVSVTHTE SFEKEKRTPK ANQLYQNSEF LLAKDKFPPS DSHGRKKPKH HKKKHRSLAS
301: HGAGYDAEQR LYSHAFKKSM SLLSRLMKHK FGWVFNKPVD AVALGLHDYF AIIKHPMDLG TIKTRLTHGQ YRNPREFADD VRLTFHNAMT YNPKGQDVHF
401: MAEQLLGIFE AQWPEIEAEV QYLASCPPLP NKFPPPPIDV RFLDRSDSVK HHMVLDSKSR PLSHTPTYSA RTPSMKKPKA KDPDKRDMTI DEKRKLSNNL
501: QNLPPEKLDV VVQIIKNKNL SVRQHDDEIE VEIDSMDTET LWELDRFVAN YKKNLSKQKR KAERAMLARQ DAELHAQHVA PQQPSQEPNI GVKSPKQNLI
601: VDEKLATSVP EQADNNGQNA SRSSSSSSSS SDTGSSSSDS DSDSSSSDGS DAANSS
001: MASEPVNGGE GIDGAREKQI IKVYKRKGKG QRKQSSFFAL EAAIEKPEGL LENENDNNDV SPAETLAPEF EDPIVVVKNS IEEAALGTNS HGDKNLTEAP
101: SENLPGDDSD KVIDKPLVEA FSQAQPQDDA SLAAMDKSEE VPSQIPKAQD DVNTVVVDEN SIKEPPKSLA QEDVTTVIVD KNPIEAPSQT LSLEDGDTLV
201: VDKNPIEVSS EEDVHVIDAD NLIKEAHPEN FVERDTTDAQ QPAGLTSDSA HATAAGSMPM EEDADGRIRI HVASTTKQQK EEIRKKLEDQ LNVVRGMVKK
301: IEDKEGEIGA YNDSRVLINT GINNGGGRIL SGFASAGLPR EVIRAPRPVN QLSISVLENT QGVNEHVEKE KRTPKANQFY RNSEFLLGDK LPPAESNKKS
401: KSSSKKQGGD VGHGFGAGTK VFKNCSALLE RLMKHKHGWV FNAPVDVKGL GLLDYYTIIE HPMDLGTIKS ALMKNLYKSP REFAEDVRLT FHNAMTYNPE
501: GQDVHLMAVT LLQIFEERWA VIEADYNREM RFVTGYEMNL PTPTMRSRLG PTMPPPPINV RNTIDRADWS NRQPTTTPGR TPTSATPSGR TPALKKPKAN
601: EPNKRDMTYE EKQKLSGHLQ NLPPDKLDAI VQIVNKRNTA VKLRDEEIEV DIDSVDPETL WELDRFVTNY KKGLSKKKRK AELAIQARAE AERNSQQQMA
701: PAPAAHEFSR EGGNTAKKTL PTPLPSQVEK QNNETSRSSS SSSSSSSSSS SDSDSDSSSS SGSDQT
101: SENLPGDDSD KVIDKPLVEA FSQAQPQDDA SLAAMDKSEE VPSQIPKAQD DVNTVVVDEN SIKEPPKSLA QEDVTTVIVD KNPIEAPSQT LSLEDGDTLV
201: VDKNPIEVSS EEDVHVIDAD NLIKEAHPEN FVERDTTDAQ QPAGLTSDSA HATAAGSMPM EEDADGRIRI HVASTTKQQK EEIRKKLEDQ LNVVRGMVKK
301: IEDKEGEIGA YNDSRVLINT GINNGGGRIL SGFASAGLPR EVIRAPRPVN QLSISVLENT QGVNEHVEKE KRTPKANQFY RNSEFLLGDK LPPAESNKKS
401: KSSSKKQGGD VGHGFGAGTK VFKNCSALLE RLMKHKHGWV FNAPVDVKGL GLLDYYTIIE HPMDLGTIKS ALMKNLYKSP REFAEDVRLT FHNAMTYNPE
501: GQDVHLMAVT LLQIFEERWA VIEADYNREM RFVTGYEMNL PTPTMRSRLG PTMPPPPINV RNTIDRADWS NRQPTTTPGR TPTSATPSGR TPALKKPKAN
601: EPNKRDMTYE EKQKLSGHLQ NLPPDKLDAI VQIVNKRNTA VKLRDEEIEV DIDSVDPETL WELDRFVTNY KKGLSKKKRK AELAIQARAE AERNSQQQMA
701: PAPAAHEFSR EGGNTAKKTL PTPLPSQVEK QNNETSRSSS SSSSSSSSSS SDSDSDSSSS SGSDQT
Arabidopsis Description
GTE4Transcription factor GTE4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNC4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.