Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 3
- mitochondrion 1
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY66497 | Canola | nucleus | 40.1 | 99.35 |
| CDY26219 | Canola | nucleus | 45.05 | 93.01 |
| CDX96751 | Canola | nucleus, plastid | 78.12 | 81.97 |
| CDX83890 | Canola | nucleus, plastid | 77.6 | 81.42 |
| CDY26215 | Canola | mitochondrion | 85.42 | 79.23 |
| CDY21732 | Canola | cytosol | 45.31 | 68.5 |
| AT1G17790.1 | Thale cress | nucleus, plastid | 77.08 | 60.78 |
| CDX82103 | Canola | plastid | 48.7 | 59.74 |
| CDY48040 | Canola | nucleus, plastid | 58.59 | 57.4 |
| CDX81848 | Canola | cytosol, nucleus, plastid | 40.62 | 56.73 |
| CDX82101 | Canola | nucleus | 24.74 | 51.91 |
| CDY15568 | Canola | nucleus | 34.9 | 42.27 |
| Os01t0214300-01 | Rice | cytosol, nucleus | 16.41 | 37.95 |
| GSMUA_Achr10P... | Banana | nucleus, plastid | 43.75 | 37.58 |
| GSMUA_Achr7P09350_001 | Banana | nucleus, plastid | 47.4 | 35.41 |
| GSMUA_Achr11P... | Banana | nucleus | 38.28 | 34.75 |
| Zm00001d008922_P001 | Maize | plastid | 43.75 | 34.29 |
| TraesCS3D01G146600.1 | Wheat | nucleus, plastid | 44.53 | 33.79 |
| TraesCS3B01G164100.1 | Wheat | nucleus, plastid | 44.53 | 33.53 |
| TraesCS3A01G140500.1 | Wheat | nucleus, plastid | 44.53 | 33.53 |
| PGSC0003DMT400061991 | Potato | cytoskeleton, cytosol, nucleus | 26.82 | 33.12 |
| CDY08771 | Canola | nucleus | 30.21 | 32.77 |
| EES02258 | Sorghum | plastid | 36.46 | 31.39 |
| GSMUA_Achr1P11660_001 | Banana | nucleus | 40.62 | 30.41 |
| VIT_19s0014g01650.t01 | Wine grape | nucleus | 46.88 | 30.15 |
| CDY65656 | Canola | cytosol | 14.06 | 26.09 |
| CDY09981 | Canola | nucleus | 43.23 | 25.98 |
| CDY65645 | Canola | nucleus, plastid | 34.11 | 25.74 |
| CDY06203 | Canola | nucleus | 42.97 | 25.62 |
| TraesCS6D01G177700.1 | Wheat | cytosol, plastid | 41.67 | 25.2 |
| HORVU6Hr1G045030.1 | Barley | nucleus | 41.41 | 25.12 |
| HORVU6Hr1G045070.4 | Barley | nucleus | 41.41 | 25.0 |
| Os02t0250300-01 | Rice | nucleus | 42.19 | 24.7 |
| CDX78390 | Canola | nucleus | 15.1 | 24.27 |
| Zm00001d016131_P006 | Maize | nucleus | 42.19 | 24.14 |
| CDX70356 | Canola | nucleus, plastid | 15.1 | 23.48 |
| CDX86532 | Canola | nucleus | 42.97 | 23.4 |
| OQU84709 | Sorghum | nucleus | 43.23 | 23.31 |
| PGSC0003DMT400039787 | Potato | nucleus | 42.19 | 23.01 |
| Solyc12g014170.1.1 | Tomato | nucleus | 41.41 | 22.68 |
| PGSC0003DMT400032373 | Potato | nucleus | 40.89 | 21.19 |
| Solyc07g062660.2.1 | Tomato | nucleus | 38.8 | 19.81 |
| Zm00001d053427_P007 | Maize | nucleus | 34.64 | 19.47 |
| CDX70357 | Canola | plastid | 19.79 | 19.34 |
| CDX90608 | Canola | cytosol | 17.45 | 18.82 |
| CDY29075 | Canola | cytoskeleton, cytosol, nucleus | 17.71 | 18.68 |
| CDY31648 | Canola | nucleus | 20.57 | 18.59 |
| CDX84278 | Canola | nucleus | 20.57 | 18.04 |
| CDY72432 | Canola | cytosol | 22.14 | 16.83 |
| Zm00001d039369_P004 | Maize | plastid | 40.62 | 16.65 |
| CDY68605 | Canola | cytosol | 23.44 | 16.39 |
| CDY20057 | Canola | nucleus | 25.78 | 15.35 |
| CDY43984 | Canola | endoplasmic reticulum | 13.8 | 12.13 |
| CDX84396 | Canola | nucleus | 18.49 | 11.58 |
| CDY48139 | Canola | nucleus | 22.14 | 9.62 |
| CDY16729 | Canola | nucleus | 24.22 | 8.14 |
| CDY13699 | Canola | nucleus | 9.38 | 7.88 |
| CDX83673 | Canola | nucleus | 9.11 | 7.03 |
Protein Annotations
| Gene3D:1.20.1270.220 | Gene3D:1.20.920.10 | MapMan:15.5.54 | UniProt:A0A078FXQ1 | InterPro:Bromodomain | InterPro:Bromodomain-like_sf |
| EnsemblPlants:CDY19175 | ProteinID:CDY19175 | ProteinID:CDY19175.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00006467001 | InterPro:GTE_bromo | InterPro:IPR001487 | InterPro:IPR027353 | InterPro:IPR036427 |
| InterPro:IPR038336 | InterPro:NET_dom | InterPro:NET_sf | PFAM:PF00439 | PFAM:PF17035 | PRINTS:PR00503 |
| PFscan:PS50014 | PFscan:PS51525 | PANTHER:PTHR22880 | PANTHER:PTHR22880:SF147 | SMART:SM00297 | SUPFAM:SSF47370 |
| UniParc:UPI0004EEA9B6 | SEG:seg | : | : | : | : |
Description
BnaC05g13760DBnaC05g13760D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FXQ1]
Coordinates
chrLK032093:-:11180..13203
Molecular Weight (calculated)
42147.3 Da
IEP (calculated)
5.698
GRAVY (calculated)
-0.692
Length
384 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSGGGASKT TKHRRTKPMV VPQHARSAAL LSPSNPFASE EEDHPPMLKV SLSSISKLEV RSLKRRLTAE LDEVRSLIAQ FDPQGGNFTT GSMGKGGNKK
101: LKTGNGVKRG DKGTVQIFKK CLNLLTKLMK HKDGWVFNVP VDAKGFGLHD YHTIVKEPMD LGTVKAKLGE GLYESPLEFA EDVRLTFNNA ILYNPVGHEV
201: HSMAKFLLSM FEEKWAPIEE APVDIRDLTM DEKRRLSEEL QDLPYDKLET VVQIVKKSNP ELSQQDDEIE LDIDSLDIQT LWELYSFVTG YKESLSNKKE
301: EDQGFGSERD AESAHNIIQE PATGTERSRV TESGKAIRMS SSPVRQENKA GGSSSSNSSS SDSGSSSSDS DSDSSSGRGS DTGN
101: LKTGNGVKRG DKGTVQIFKK CLNLLTKLMK HKDGWVFNVP VDAKGFGLHD YHTIVKEPMD LGTVKAKLGE GLYESPLEFA EDVRLTFNNA ILYNPVGHEV
201: HSMAKFLLSM FEEKWAPIEE APVDIRDLTM DEKRRLSEEL QDLPYDKLET VVQIVKKSNP ELSQQDDEIE LDIDSLDIQT LWELYSFVTG YKESLSNKKE
301: EDQGFGSERD AESAHNIIQE PATGTERSRV TESGKAIRMS SSPVRQENKA GGSSSSNSSS SDSGSSSSDS DSDSSSGRGS DTGN
001: MSSEHISGGG ASKTKKHKWS SSQNRPKPMG VSRQERSVPL VSPSNSFASE DDHHMLKISL SSISKLEVRN LKRKLKSELD EVRSLIKRFD PEANPGGSMA
101: KSGVVGRSKK VKTGNGGGKK SGHGADKGTV QIFKNCNSLL TKLMKHKSAW VFNVPVDAKG LGLHDYHNIV KEPMDLGTVK TKLGKSLYKS PLDFAEDVRL
201: TFNNAILYNP IGHDVYRFAE LLLNMFEDKW VSIEMQYDNL HRKFKPTRDI EFPAPAPSIA PIVEPLPAIV PSPSPSSPPP PPPPPVAAPV LENRTWEREE
301: SMTIPVEPEA VITAPEKAEE EEAPVNNRDL TLEEKRRLSE ELQDLPYDKL ETVVQIIKKS NPELSQKDDE IELDIDSLDI NTLWELYRFV TGYKESLSKK
401: NEAHGFGSER DAESVHNSIQ EPTTLVSGTT TSRVTESGKA IRTSSPARQE NNASGSSSSN SSSSDSGSCS SDTDSDSSSG RGSDNGN
101: KSGVVGRSKK VKTGNGGGKK SGHGADKGTV QIFKNCNSLL TKLMKHKSAW VFNVPVDAKG LGLHDYHNIV KEPMDLGTVK TKLGKSLYKS PLDFAEDVRL
201: TFNNAILYNP IGHDVYRFAE LLLNMFEDKW VSIEMQYDNL HRKFKPTRDI EFPAPAPSIA PIVEPLPAIV PSPSPSSPPP PPPPPVAAPV LENRTWEREE
301: SMTIPVEPEA VITAPEKAEE EEAPVNNRDL TLEEKRRLSE ELQDLPYDKL ETVVQIIKKS NPELSQKDDE IELDIDSLDI NTLWELYRFV TGYKESLSKK
401: NEAHGFGSER DAESVHNSIQ EPTTLVSGTT TSRVTESGKA IRTSSPARQE NNASGSSSSN SSSSDSGSCS SDTDSDSSSG RGSDNGN
Arabidopsis Description
GTE5Transcription factor GTE5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8H1D7]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.