Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra039088.1-P | Field mustard | nucleus | 97.67 | 96.77 |
| CDY13699 | Canola | nucleus | 56.12 | 79.21 |
| CDX83673 | Canola | nucleus | 55.35 | 71.69 |
| AT3G27260.3 | Thale cress | nucleus | 82.48 | 64.72 |
| KRH07021 | Soybean | nucleus | 57.52 | 49.87 |
| KRG94435 | Soybean | nucleus | 57.21 | 49.73 |
| VIT_14s0171g00380.t01 | Wine grape | nucleus | 56.28 | 49.25 |
| KRH07022 | Soybean | nucleus | 54.73 | 44.91 |
| PGSC0003DMT400052108 | Potato | nucleus | 50.39 | 44.58 |
| Solyc02g093880.2.1 | Tomato | nucleus | 49.15 | 43.72 |
| GSMUA_Achr8P01140_001 | Banana | nucleus | 46.82 | 40.21 |
| GSMUA_Achr10P... | Banana | nucleus | 38.76 | 39.19 |
| GSMUA_Achr2P20970_001 | Banana | nucleus | 43.72 | 39.17 |
| GSMUA_Achr3P02660_001 | Banana | plasma membrane | 37.67 | 37.16 |
| Os02t0601800-03 | Rice | nucleus | 40.93 | 36.97 |
| TraesCS6D01G196600.3 | Wheat | nucleus | 40.16 | 36.84 |
| TraesCS6A01G214000.1 | Wheat | nucleus | 39.84 | 36.4 |
| TraesCS3A01G087800.1 | Wheat | plastid | 34.42 | 36.39 |
| Zm00001d035167_P001 | Maize | nucleus | 42.64 | 36.28 |
| GSMUA_Achr8P08920_001 | Banana | nucleus | 36.43 | 36.15 |
| TraesCS6B01G244000.2 | Wheat | plastid | 40.31 | 36.11 |
| KXG24325 | Sorghum | nucleus | 39.38 | 35.88 |
| HORVU6Hr1G054560.16 | Barley | nucleus | 39.69 | 35.8 |
| EES07108 | Sorghum | nucleus | 39.22 | 35.58 |
| TraesCS7D01G309100.1 | Wheat | nucleus | 41.24 | 35.47 |
| TraesCS3A01G122200.1 | Wheat | nucleus | 38.91 | 35.2 |
| TraesCS7A01G312700.2 | Wheat | nucleus | 40.78 | 35.07 |
| TraesCS3D01G124100.1 | Wheat | nucleus | 38.76 | 35.06 |
| TraesCS3B01G141400.2 | Wheat | nucleus, plastid | 38.76 | 35.06 |
| Zm00001d017126_P001 | Maize | nucleus | 37.67 | 34.91 |
| TraesCS7B01G212400.2 | Wheat | nucleus | 40.47 | 34.8 |
| TraesCS3D01G087900.4 | Wheat | nucleus | 38.6 | 34.78 |
| HORVU3Hr1G022660.1 | Barley | nucleus | 38.29 | 34.69 |
| TraesCS3B01G103200.2 | Wheat | nucleus | 38.29 | 34.55 |
| HORVU7Hr1G074620.7 | Barley | cytosol, mitochondrion, nucleus | 40.31 | 33.38 |
| Zm00001d049638_P009 | Maize | nucleus | 40.16 | 33.33 |
| CDX84396 | Canola | nucleus | 31.47 | 33.12 |
| GSMUA_Achr3P02670_001 | Banana | nucleus | 34.57 | 31.63 |
| CDY15568 | Canola | nucleus | 14.73 | 29.97 |
| HORVU3Hr1G015760.1 | Barley | nucleus | 25.58 | 29.89 |
| CDX83890 | Canola | nucleus, plastid | 15.19 | 26.78 |
| CDX82103 | Canola | plastid | 12.87 | 26.52 |
| CDX82101 | Canola | nucleus | 7.44 | 26.23 |
| CDX96751 | Canola | nucleus, plastid | 14.88 | 26.23 |
| CDY19175 | Canola | nucleus, plastid | 15.35 | 25.78 |
| CDY48040 | Canola | nucleus, plastid | 15.66 | 25.77 |
| CDY08771 | Canola | nucleus | 13.95 | 25.42 |
| CDY43984 | Canola | endoplasmic reticulum | 17.05 | 25.17 |
| CDY48139 | Canola | nucleus | 34.26 | 25.0 |
| CDY26215 | Canola | mitochondrion | 15.35 | 23.91 |
| CDY65656 | Canola | cytosol | 7.6 | 23.67 |
| CDY21732 | Canola | cytosol | 8.84 | 22.44 |
| CDY65645 | Canola | nucleus, plastid | 16.9 | 21.41 |
| CDY66497 | Canola | nucleus | 4.96 | 20.65 |
| CDY16729 | Canola | nucleus | 36.28 | 20.49 |
| CDX78390 | Canola | nucleus | 7.29 | 19.67 |
| CDX70356 | Canola | nucleus, plastid | 7.44 | 19.43 |
| CDX90608 | Canola | cytosol | 10.39 | 18.82 |
| CDY26219 | Canola | nucleus | 5.43 | 18.82 |
| CDY06203 | Canola | nucleus | 18.14 | 18.17 |
| CDY09981 | Canola | nucleus | 17.98 | 18.15 |
| CDX70357 | Canola | plastid | 11.01 | 18.07 |
| CDY29075 | Canola | cytoskeleton, cytosol, nucleus | 10.08 | 17.86 |
| CDY72432 | Canola | cytosol | 13.49 | 17.23 |
| CDY31648 | Canola | nucleus | 11.32 | 17.18 |
| CDX86532 | Canola | nucleus | 18.76 | 17.16 |
| CDX84278 | Canola | nucleus | 11.32 | 16.67 |
| CDY68605 | Canola | cytosol | 13.49 | 15.85 |
| CDX81848 | Canola | cytosol, nucleus, plastid | 6.36 | 14.91 |
Protein Annotations
| Gene3D:1.20.1270.220 | Gene3D:1.20.920.10 | MapMan:15.5.54 | UniProt:A0A078G513 | InterPro:Bromodomain | InterPro:Bromodomain-like_sf |
| EnsemblPlants:CDY20057 | ProteinID:CDY20057 | ProteinID:CDY20057.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00009900001 | InterPro:GTE_bromo | InterPro:IPR001487 | InterPro:IPR027353 | InterPro:IPR036427 |
| InterPro:IPR038336 | InterPro:NET_dom | InterPro:NET_sf | PFAM:PF00439 | PFAM:PF17035 | PRINTS:PR00503 |
| PFscan:PS50014 | PFscan:PS51525 | PANTHER:PTHR22880 | PANTHER:PTHR22880:SF227 | SMART:SM00297 | SUPFAM:SSF47370 |
| UniParc:UPI0004EE0B31 | SEG:seg | : | : | : | : |
Description
BnaA09g01940DBnaA09g01940D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G513]
Coordinates
chrLK032102:-:650685..653986
Molecular Weight (calculated)
71790.8 Da
IEP (calculated)
4.544
GRAVY (calculated)
-0.791
Length
645 amino acids
Sequence
(BLAST)
(BLAST)
001: MVESAAFPGG YYRNAFEAPD ESSQGSGSSA QIDTEVTASQ NSTTPARKRI NLNPDDEDPY GVRRQVIPLY NKSQSERKDL IHRLKEELEQ TKIVLKNAEL
101: LNVRSITSRG WNRGSSGKFE SLPDTALMKQ CDTLLKKLWS HPHSWVFQAP VDVVKLNLPD YLTVIKHPMD LGTVKKNLAS SVYLTPHEFA SDVRLTFANA
201: MTYNPPGHDV HIMADILSKL FESRWKAIEK KLAAVTLEPS EERRTAISAP PSKKRKMASP VRETVKPLMT AEERHRLGRQ LESLLEELPS QIIDFLKKHS
301: SSGGEVAEED EIEIDIDVLG DEVLLTLQKL MDEYIKGKEA KQSSVGPSNS SLQRGGSQIV NEMAVEYVGG NEPPISGTSS DSESSSSEDQ SDDAKPMIQE
401: SSSKIPETAN AEAQRDEDER IDDLLEESAG APEQQKPSSD ESDSQPDGNI LETPAPSEKQ YRAALLKNKF ADIILKAREK TLPQNSNKGD PEKLRKEREE
501: LELQMKKERA RLQAEAEAAE DARRQAEAEA AAEAAAESKR KRELEREAAR QALLKMEQTV EINENSRFLE DLEMLSSSAP EQLPSSVDET SPERGLDALG
601: SFNFRGINPL EQLGLYMKQD EDEEEPEAPR AVPKLATDVE EGEID
101: LNVRSITSRG WNRGSSGKFE SLPDTALMKQ CDTLLKKLWS HPHSWVFQAP VDVVKLNLPD YLTVIKHPMD LGTVKKNLAS SVYLTPHEFA SDVRLTFANA
201: MTYNPPGHDV HIMADILSKL FESRWKAIEK KLAAVTLEPS EERRTAISAP PSKKRKMASP VRETVKPLMT AEERHRLGRQ LESLLEELPS QIIDFLKKHS
301: SSGGEVAEED EIEIDIDVLG DEVLLTLQKL MDEYIKGKEA KQSSVGPSNS SLQRGGSQIV NEMAVEYVGG NEPPISGTSS DSESSSSEDQ SDDAKPMIQE
401: SSSKIPETAN AEAQRDEDER IDDLLEESAG APEQQKPSSD ESDSQPDGNI LETPAPSEKQ YRAALLKNKF ADIILKAREK TLPQNSNKGD PEKLRKEREE
501: LELQMKKERA RLQAEAEAAE DARRQAEAEA AAEAAAESKR KRELEREAAR QALLKMEQTV EINENSRFLE DLEMLSSSAP EQLPSSVDET SPERGLDALG
601: SFNFRGINPL EQLGLYMKQD EDEEEPEAPR AVPKLATDVE EGEID
001: MVESAAFPGG YYRNTFEAPE ESEGSGSSAQ IDTEVTASEN SSTPARKCIM LNSNDEDPYG VQRQVISLYN MSQSERKDLI YRLKLELEQT KIVLKNAELQ
101: RMNPAAVSST SDRVGFSTGQ KISSRVSNSK KPSDFAVGSG KKVRHQNGTS RGWNRGTSGK FESSKETMTS TPNITLMKQC DTLLRKLWSH PHSWVFQAPV
201: DVVKLNIPDY LTTIKHPMDL GTVKKNLASG VYSSPHEFAA DVRLTFTNAM TYNPPGHDVH IMGDILSKLF EARWKTIKKK LPPCSMQTLP AVTLEPNDER
301: KAAISVPPAK KRKMASPVRE SVPEPVKPLM TEVERHRLGR QLESLLDELP AHIIDFLKKH NSNGGEIAED EIEIDIDVLS DEVLVTLRNL LDEYIQNKEA
401: KQTNVEPCEI ELINGSRPSN SSLQRGNEMA DEYVDGNEPP ISRSSSDSDS GSSEDQSDDA KPMVQGDSSK MPETANSEAQ RDENTRIDDL FVGSQSTGAL
501: EQMDICSQQK LSSDESDGQH EGNILETPAS SEKRYRAALL KNRFADIILK AREKPLPQNG IKGDPERLRK EREELVLQKK KEKARLQAEA EAAEDARRQA
601: EAEAAAEAAA EAKRKRELER EAARQALLKM EKTVEINENS RFLEDLEMLS SSAPEQLPSS AEETSPERPL DALGSFNLRG SNPLEQLGLY MKQDDDEEEP
701: EAPAVPNLAN DVEEGEID
101: RMNPAAVSST SDRVGFSTGQ KISSRVSNSK KPSDFAVGSG KKVRHQNGTS RGWNRGTSGK FESSKETMTS TPNITLMKQC DTLLRKLWSH PHSWVFQAPV
201: DVVKLNIPDY LTTIKHPMDL GTVKKNLASG VYSSPHEFAA DVRLTFTNAM TYNPPGHDVH IMGDILSKLF EARWKTIKKK LPPCSMQTLP AVTLEPNDER
301: KAAISVPPAK KRKMASPVRE SVPEPVKPLM TEVERHRLGR QLESLLDELP AHIIDFLKKH NSNGGEIAED EIEIDIDVLS DEVLVTLRNL LDEYIQNKEA
401: KQTNVEPCEI ELINGSRPSN SSLQRGNEMA DEYVDGNEPP ISRSSSDSDS GSSEDQSDDA KPMVQGDSSK MPETANSEAQ RDENTRIDDL FVGSQSTGAL
501: EQMDICSQQK LSSDESDGQH EGNILETPAS SEKRYRAALL KNRFADIILK AREKPLPQNG IKGDPERLRK EREELVLQKK KEKARLQAEA EAAEDARRQA
601: EAEAAAEAAA EAKRKRELER EAARQALLKM EKTVEINENS RFLEDLEMLS SSAPEQLPSS AEETSPERPL DALGSFNLRG SNPLEQLGLY MKQDDDEEEP
701: EAPAVPNLAN DVEEGEID
Arabidopsis Description
GTE8Global transcription factor group E8 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LS77]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.