Factsheet for Bra039088.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
plasma membrane 1
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
EpiLoc:	plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY20057	Canola	nucleus	96.77	97.67
Bra025262.1-P	Field mustard	nucleus	67.74	81.52
AT3G27260.3	Thale cress	nucleus	82.8	65.57
KRH07021	Soybean	nucleus	57.3	50.13
KRG94435	Soybean	nucleus	56.84	49.87
VIT_14s0171g00380.t01	Wine grape	nucleus	56.37	49.8
PGSC0003DMT400052108	Potato	nucleus	50.69	45.27
KRH07022	Soybean	nucleus	54.53	45.17
Solyc02g093880.2.1	Tomato	nucleus	49.31	44.28
GSMUA_Achr8P01140_001	Banana	nucleus	46.85	40.61
GSMUA_Achr10P...	Banana	nucleus	38.25	39.03
GSMUA_Achr2P20970_001	Banana	nucleus	43.01	38.89
TraesCS6D01G196600.3	Wheat	nucleus	40.25	37.27
GSMUA_Achr8P08920_001	Banana	nucleus	37.02	37.08
Os02t0601800-03	Rice	nucleus	40.55	36.97
TraesCS3A01G087800.1	Wheat	plastid	34.56	36.89
GSMUA_Achr3P02660_001	Banana	plasma membrane	37.02	36.85
TraesCS6A01G214000.1	Wheat	nucleus	39.94	36.83
TraesCS6B01G244000.2	Wheat	plastid	40.4	36.53
HORVU6Hr1G054560.16	Barley	nucleus	39.78	36.22
Zm00001d035167_P001	Maize	nucleus	42.09	36.15
EES07108	Sorghum	nucleus	39.48	36.15
KXG24325	Sorghum	nucleus	39.02	35.88
TraesCS7D01G309100.1	Wheat	nucleus	41.17	35.73
Zm00001d017126_P001	Maize	nucleus	37.94	35.49
TraesCS7A01G312700.2	Wheat	nucleus	40.86	35.47
TraesCS3A01G122200.1	Wheat	nucleus	38.71	35.34
TraesCS3B01G141400.2	Wheat	nucleus, plastid	38.56	35.2
TraesCS3D01G124100.1	Wheat	nucleus	38.56	35.2
TraesCS7B01G212400.2	Wheat	nucleus	40.55	35.2
TraesCS3D01G087900.4	Wheat	nucleus	38.71	35.2
TraesCS3B01G103200.2	Wheat	nucleus	38.4	34.97
HORVU3Hr1G022660.1	Barley	nucleus	38.1	34.83
Bra038624.1-P	Field mustard	nucleus	12.6	33.88
HORVU7Hr1G074620.7	Barley	cytosol, mitochondrion, nucleus	40.4	33.76
Zm00001d049638_P009	Maize	nucleus	39.48	33.08
GSMUA_Achr3P02670_001	Banana	nucleus	33.79	31.21
HORVU3Hr1G015760.1	Barley	nucleus	25.81	30.43
Bra022044.1-P	Field mustard	nucleus	21.81	27.05
Bra031004.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	14.13	25.92
Bra008074.1-P	Field mustard	nucleus, plastid	15.51	25.77
Bra025948.1-P	Field mustard	mitochondrion	15.21	23.91
Bra016586.1-P	Field mustard	nucleus, plastid	15.51	22.95
Bra005311.1-P	Field mustard	cytosol, plastid	7.53	21.03
Bra006068.1-P	Field mustard	nucleus	17.51	20.77
Bra024402.1-P	Field mustard	nucleus, plastid	17.36	20.73
Bra035848.1-P	Field mustard	nucleus	36.25	19.82
Bra005383.1-P	Field mustard	nucleus	11.21	18.96
Bra012810.1-P	Field mustard	cytosol	9.98	18.26
Bra032431.1-P	Field mustard	nucleus	17.97	17.81
Bra030643.1-P	Field mustard	nucleus	19.2	16.91
Bra015485.1-P	Field mustard	nucleus	18.74	16.29
Bra034451.1-P	Field mustard	cytosol	10.6	13.07

Protein Annotations

Gene3D:1.20.1270.220	Gene3D:1.20.920.10	MapMan:15.5.54	EnsemblPlantsGene:Bra039088	EnsemblPlants:Bra039088.1	EnsemblPlants:Bra039088.1-P
InterPro:Bromodomain	InterPro:Bromodomain-like_sf	ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:GTE_bromo	InterPro:IPR001487	InterPro:IPR027353	InterPro:IPR036427	InterPro:IPR038336	UniProt:M4FDB7
InterPro:NET_dom	InterPro:NET_sf	PFAM:PF00439	PFAM:PF17035	PRINTS:PR00503	PFscan:PS50014
PFscan:PS51525	PANTHER:PTHR22880	PANTHER:PTHR22880:SF227	SMART:SM00297	SUPFAM:SSF47370	UniParc:UPI0002541B8C
SEG:seg	:	:	:	:	:

Description

AT3G27260 (E=4e-168) GTE8 | GTE8; DNA binding

Coordinates

chrA09:+:1198841..1201532

Molecular Weight (calculated)

72480.6 Da

IEP (calculated)

4.563

GRAVY (calculated)

-0.802

Length

651 amino acids

Sequence
(BLAST)

001: MVESAAFPGG YYRNTFEAPD ESSQGSGSSA QIDTEVTASQ NSTTPARKRI NLNPDDEDPY GVRRQVIPLY NKSQSERKDL IHRLKRELEQ TKIVLKNAEL
101: LNVRSITSRG WNRGSSGKFE SLPDTALMKQ CDTLLKKLWS HPHSWVFQAP VDVVKLNLPD YLTVIKHPMD LGTVKKNLAS SVYLTPHEFA SDVRLTFANA
201: MTYNPPGHDV HIMADILSKL FESRWKAIEK KLPAVTLEPS VERRTAISAP PSKKRKMASP VRETVKPLMT AEERHRLGRQ LESLLEELPS QIIDFLKKHS
301: SSGGEVAEED EIEIDIDVLS DEVLLTLQKL MDEYVKGKEA KQSDVEPFDG PGPSNSSLQR GGSQIVNEMA VEYVGGNEPP ISGTSSDSDS GSSEDQSDDA
401: KPMIREGSSK MPETANAEAQ RDEDERIDDL LEESAGAAEQ QKPSSDESDS QPDGNMLETP APSEKQYRAA LLKNKFADII LKAREKTLPQ NSNKGDPEKL
501: RKEREELELQ MKKERARLQA EAEAAEDARR QAEAEAAAEA AAESKRKREL EREAARQALL KMEQTVEINE NSRFLEDLEM LSSSAPEQLP SSVDETSPER
601: GLDALGSFNF RGINPLEQLG LYMKQDDDEE EPEAPRAVPK LATDVEEGEI D

Best Arabidopsis Sequence Match ( AT3G27260.4 )
(BLAST)

001: MVESAAFPGG YYRNTFEAPE ESEGSGSSAQ IDTEVTASEN SSTPARKCIM LNSNDEDPYG VQRQVISLYN MSQSERKDLI YRLKLELEQT KIVLKNAELQ
101: RMNPAAVSST SDRVGFSTGQ KISSRVSNSK KPSDFAVGSG KKVRHQNGTS RGWNRGTSGK FESSKETMTS TPNITLMKQC DTLLRKLWSH PHSWVFQAPV
201: DVVKLNIPDY LTTIKHPMDL GTVKKNLASG VYSSPHEFAA DVRLTFTNAM TYNPPGHDVH IMGDILSKLF EARWKTIKKK LPPCSMQTLP AVTLEPNDER
301: KAAISVPPAK KRKMASPVRE SVPEPVKPLM TEVERHRLGR QLESLLDELP AHIIDFLKKH NSNGGEIAED EIEIDIDVLS DEVLVTLRNL LDEYIQNKEA
401: KQTNVEPCEI ELINGSRPSN SSLQRGNEMA DEYVDGNEPP ISRSSSDSDS GSSEDQSDDA KPMVQGDSSK MPETANSEAQ RDENTRIDDL FVGSQSTGAL
501: EQMDICSQQK LSSDESDGQH EGNILETPAS SEKRYRAALL KNRFADIILK AREKPLPQNG IKGDPERLRK EREELVLQKK KEKARLQAEA EAAEDARRQA
601: EAEAAAEAAA EAKRKRELER EAARQALLKM EKTVEINENS RFLEDLEMLS SSAPEQLPSS AEETSPERPL DALGSFNLRG SNPLEQLGLY MKQDDDEEEP
701: EAPAVPNLAN DVEEGEID

Arabidopsis Description

GTE8Global transcription factor group E8 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LS77]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.