Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d017101_P001 | |
| Zm00001d025707_P001 | |
| Zm00001d042443_P001 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d021185_P001 | Maize | cytosol, nucleus, plastid | 10.16 | 98.72 |
| KXG24325 | Sorghum | nucleus | 80.74 | 86.44 |
| Zm00001d049638_P009 | Maize | nucleus | 81.79 | 79.79 |
| TraesCS7D01G309100.1 | Wheat | nucleus | 61.87 | 62.53 |
| TraesCS7A01G312700.2 | Wheat | nucleus | 61.87 | 62.53 |
| TraesCS7B01G212400.2 | Wheat | nucleus | 61.48 | 62.13 |
| HORVU7Hr1G074620.7 | Barley | cytosol, mitochondrion, nucleus | 61.35 | 59.69 |
| GSMUA_Achr8P01140_001 | Banana | nucleus | 46.04 | 46.47 |
| Bra025262.1-P | Field mustard | nucleus | 32.72 | 45.84 |
| VIT_17s0000g01830.t01 | Wine grape | nucleus | 45.65 | 45.83 |
| KRH57199 | Soybean | nucleus | 44.2 | 45.33 |
| GSMUA_Achr8P08920_001 | Banana | nucleus | 38.13 | 44.46 |
| KRH63729 | Soybean | nucleus | 45.51 | 44.06 |
| KRH54219 | Soybean | nucleus | 44.99 | 43.27 |
| CDY20057 | Canola | nucleus | 36.28 | 42.64 |
| GSMUA_Achr10P... | Banana | nucleus | 35.75 | 42.48 |
| CDY13699 | Canola | nucleus | 25.59 | 42.45 |
| Bra039088.1-P | Field mustard | nucleus | 36.15 | 42.09 |
| KRH07021 | Soybean | nucleus | 41.16 | 41.94 |
| VIT_14s0171g00380.t01 | Wine grape | nucleus | 40.5 | 41.66 |
| Solyc03g111090.2.1 | Tomato | nucleus | 42.48 | 41.23 |
| GSMUA_Achr2P20970_001 | Banana | nucleus | 38.79 | 40.83 |
| KRG94435 | Soybean | nucleus | 39.84 | 40.7 |
| PGSC0003DMT400039290 | Potato | nucleus | 42.08 | 40.59 |
| Bra038624.1-P | Field mustard | nucleus | 12.8 | 40.08 |
| Solyc02g093880.2.1 | Tomato | nucleus | 37.6 | 39.31 |
| AT5G14270.2 | Thale cress | nucleus | 35.62 | 39.19 |
| PGSC0003DMT400052108 | Potato | nucleus | 37.6 | 39.09 |
| AT3G01770.1 | Thale cress | nucleus | 31.93 | 39.03 |
| CDX83673 | Canola | nucleus | 25.33 | 38.55 |
| KRH07022 | Soybean | nucleus | 39.97 | 38.55 |
| Zm00001d017126_P001 | Maize | nucleus | 34.3 | 37.36 |
| CDX84396 | Canola | nucleus | 29.95 | 37.03 |
| GSMUA_Achr3P02660_001 | Banana | plasma membrane | 31.0 | 35.93 |
| AT3G27260.3 | Thale cress | nucleus | 37.73 | 34.79 |
| GSMUA_Achr3P02670_001 | Banana | nucleus | 31.4 | 33.76 |
| CDY48139 | Canola | nucleus | 32.45 | 27.83 |
| AT5G63320.1 | Thale cress | nucleus | 38.65 | 27.62 |
| Zm00001d004790_P008 | Maize | nucleus | 20.45 | 26.82 |
| Zm00001d008922_P001 | Maize | plastid | 16.89 | 26.12 |
| Zm00001d053022_P001 | Maize | nucleus | 20.58 | 25.45 |
| Zm00001d002267_P001 | Maize | plastid | 13.85 | 23.28 |
| Zm00001d036092_P004 | Maize | endoplasmic reticulum, nucleus, plastid | 11.08 | 23.01 |
| Zm00001d049400_P001 | Maize | plastid | 14.25 | 22.31 |
| CDY16729 | Canola | nucleus | 33.11 | 21.98 |
| Zm00001d026333_P001 | Maize | cytosol | 13.32 | 21.44 |
| Zm00001d024251_P001 | Maize | cytosol | 13.59 | 21.15 |
| Bra035848.1-P | Field mustard | nucleus | 32.98 | 20.99 |
| Zm00001d046528_P001 | Maize | cytosol | 3.96 | 20.0 |
| Zm00001d016131_P006 | Maize | nucleus | 17.68 | 19.97 |
| Zm00001d053427_P007 | Maize | nucleus | 14.25 | 15.81 |
| Zm00001d039369_P004 | Maize | plastid | 17.28 | 13.98 |
Protein Annotations
| Gene3D:1.20.1270.220 | Gene3D:1.20.920.10 | EntrezGene:103629004 | MapMan:15.5.54 | UniProt:A0A1D6LET0 | ProteinID:AQK78456.1 |
| ProteinID:AQK78459.1 | InterPro:Bromodomain | InterPro:Bromodomain-like_sf | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:GTE_bromo | InterPro:IPR001487 | InterPro:IPR027353 | InterPro:IPR036427 | InterPro:IPR038336 |
| InterPro:NET_dom | InterPro:NET_sf | PFAM:PF00439 | PFAM:PF17035 | PRINTS:PR00503 | PFscan:PS50014 |
| PFscan:PS51525 | PANTHER:PTHR22880 | PANTHER:PTHR22880:SF228 | SMART:SM00297 | SUPFAM:SSF47370 | UniParc:UPI0004DE8A4A |
| EnsemblPlantsGene:Zm00001d035167 | EnsemblPlants:Zm00001d035167_P001 | EnsemblPlants:Zm00001d035167_T001 | SEG:seg | : | : |
Description
Transcription factor GTE8
Coordinates
chr6:-:7486918..7493035
Molecular Weight (calculated)
83587.8 Da
IEP (calculated)
4.795
GRAVY (calculated)
-0.759
Length
758 amino acids
Sequence
(BLAST)
(BLAST)
001: MMGKTNRFSK GHQLGFVPDY RHGVEAMGES KGLGSPPRID SGSSCAPPKR KCVSVNSEEG EGASGFSMPR AREVFSLPRM TRLDKKDLEM KLRHELAQVR
101: DVQSRLFLRG SAVSMNGAAV ASVPAGDVQP KKKVEKLKRS DSVQTDRGAP PPAATVVAAP VASSVNYTSS FKQCANLLKS IMSHVWAGPF LVPVDIVKLN
201: IPDYFQIVKQ PMDLGTIQKK LKAGMYSTPR EFAADVRLTF SNAMNYNPVN NDVHLMAKTL SKNFETRWKL IEKKLPKPDD KPQPVEKPPV REPTEKNSTK
301: GVAVEKEDIT KKKPSKKSVP KQDIFQEGYS ADNPVLQPKK RKTSPLIQDA SLVEDVVPTG KRMMTSEQKY DISARLQSFG AFIPDHVVEF IRSRVDDCDA
401: DEEEMELDID VLGDDTLFEL QQLLDDYDRV NPSRNLTKED PHEAESRSQY ELINPSVCND GNELIDEDVD IGENDPPILA LPPVVLEDET ADRNSKHSTS
501: SSSSSDSESS SSDSDSSSSS GSDADAKAPQ QNSGSKEKVL PVDGVDQEKD SLSTLNLPEQ STNPISVSAD GEGGNVSEKQ VSPDKQIRAA LLRSRFADTI
601: LKAREKALDQ TTKKDPEKLR REREELERVQ REERARLQAE AKAAEDVRKR AEAAAAAEAA AEAKRQRELE REAARKALQE MEKTVDINEG SHFLKDLEML
701: GSVTGEQIPN LVGETSPGFQ MGSNTLEKLG LYMKNDEDDE DGDFTDEPVA DVEEGEID
101: DVQSRLFLRG SAVSMNGAAV ASVPAGDVQP KKKVEKLKRS DSVQTDRGAP PPAATVVAAP VASSVNYTSS FKQCANLLKS IMSHVWAGPF LVPVDIVKLN
201: IPDYFQIVKQ PMDLGTIQKK LKAGMYSTPR EFAADVRLTF SNAMNYNPVN NDVHLMAKTL SKNFETRWKL IEKKLPKPDD KPQPVEKPPV REPTEKNSTK
301: GVAVEKEDIT KKKPSKKSVP KQDIFQEGYS ADNPVLQPKK RKTSPLIQDA SLVEDVVPTG KRMMTSEQKY DISARLQSFG AFIPDHVVEF IRSRVDDCDA
401: DEEEMELDID VLGDDTLFEL QQLLDDYDRV NPSRNLTKED PHEAESRSQY ELINPSVCND GNELIDEDVD IGENDPPILA LPPVVLEDET ADRNSKHSTS
501: SSSSSDSESS SSDSDSSSSS GSDADAKAPQ QNSGSKEKVL PVDGVDQEKD SLSTLNLPEQ STNPISVSAD GEGGNVSEKQ VSPDKQIRAA LLRSRFADTI
601: LKAREKALDQ TTKKDPEKLR REREELERVQ REERARLQAE AKAAEDVRKR AEAAAAAEAA AEAKRQRELE REAARKALQE MEKTVDINEG SHFLKDLEML
701: GSVTGEQIPN LVGETSPGFQ MGSNTLEKLG LYMKNDEDDE DGDFTDEPVA DVEEGEID
001: MTERNGGFPG DYCFEAPGGD YDEGSDSPRV SEGSNCSKRK VGETFGVSKM VLPLSGLSSS DRKELIRRLR QELEQIRVFQ KNFELSRTVA LTSSSASGLT
101: RVKSFGMSRC STGPGKTVNP ISAASKPTPV TTAVMLLMKQ CEALLKRLMS HQYGWVFNTP VDVVKLNILD YFNVIEHPMD LGTVKNKLTS GTYSCPSEFA
201: ADVRLTFSNA MTYNPPGNDV YVMADTLRKF FEVRWKTLEK KLSGTKVHTE PSNLDAHKEK HIVIPVPMAK KRKTTAVDCE NVVDPAKRVM TDEDRLKLGK
301: DLESLTEFPA QLINFLRDHN SNEGGIGDDE IEIDINDLSD HALFQLRDLL DEHLREIQNK KSSVEPCEIE LLHGSVPGNS SMQHCDGSEL DDEVVDIGEN
401: EHPTSSISPV TIEKDLVLGN SNGNSLGSVS GDPKMSSLPR ASKGLGTIDL EPMLDGATSA SPTRGSSVGG LDQLESASPE KISSVEADCQ QDGNSAQNEK
501: QLPPEKSYRA AILKNRFADI ILKAREKPLN QNDTRDPEKL QREREELELQ KKKEKARLQA EAKAAEEARR KAEAQAAAEA AAEAKRKLEL EREAARQALM
601: EMEQSVELNE NAKFLEDLEL LKTVDTDHLT NTIEEEDGPD VGLRSFSFGG SNPLEQLGLF MKQDEDEEEA DPLTSPAPEI DIEEGEID
101: RVKSFGMSRC STGPGKTVNP ISAASKPTPV TTAVMLLMKQ CEALLKRLMS HQYGWVFNTP VDVVKLNILD YFNVIEHPMD LGTVKNKLTS GTYSCPSEFA
201: ADVRLTFSNA MTYNPPGNDV YVMADTLRKF FEVRWKTLEK KLSGTKVHTE PSNLDAHKEK HIVIPVPMAK KRKTTAVDCE NVVDPAKRVM TDEDRLKLGK
301: DLESLTEFPA QLINFLRDHN SNEGGIGDDE IEIDINDLSD HALFQLRDLL DEHLREIQNK KSSVEPCEIE LLHGSVPGNS SMQHCDGSEL DDEVVDIGEN
401: EHPTSSISPV TIEKDLVLGN SNGNSLGSVS GDPKMSSLPR ASKGLGTIDL EPMLDGATSA SPTRGSSVGG LDQLESASPE KISSVEADCQ QDGNSAQNEK
501: QLPPEKSYRA AILKNRFADI ILKAREKPLN QNDTRDPEKL QREREELELQ KKKEKARLQA EAKAAEEARR KAEAQAAAEA AAEAKRKLEL EREAARQALM
601: EMEQSVELNE NAKFLEDLEL LKTVDTDHLT NTIEEEDGPD VGLRSFSFGG SNPLEQLGLF MKQDEDEEEA DPLTSPAPEI DIEEGEID
Arabidopsis Description
BET9Bromodomain and extraterminal domain protein 9 [Source:UniProtKB/TrEMBL;Acc:F4K6Q7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.