Factsheet for Zm00001d039369_P004

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES02258	Sorghum	plastid	43.22	90.81
Zm00001d008922_P001	Maize	plastid	44.61	85.31
TraesCS3D01G146600.1	Wheat	nucleus, plastid	38.42	71.15
TraesCS3B01G164100.1	Wheat	nucleus, plastid	38.42	70.59
TraesCS3A01G140500.1	Wheat	nucleus, plastid	38.31	70.39
Os01t0214300-01	Rice	cytosol, nucleus	10.35	58.43
CDY15568	Canola	nucleus	16.65	49.21
CDX83890	Canola	nucleus, plastid	16.86	43.17
CDX82101	Canola	nucleus	8.22	42.08
CDX96751	Canola	nucleus, plastid	16.44	42.08
CDX82103	Canola	plastid	13.87	41.53
CDY19175	Canola	nucleus, plastid	16.65	40.62
Bra031004.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	15.37	40.56
CDY66497	Canola	nucleus	6.51	39.35
Bra008074.1-P	Field mustard	nucleus, plastid	16.44	39.29
CDY48040	Canola	nucleus, plastid	16.33	39.03
Bra025948.1-P	Field mustard	mitochondrion	17.18	38.89
CDY26215	Canola	mitochondrion	17.08	38.65
GSMUA_Achr1P11660_001	Banana	nucleus	20.81	38.01
AT1G73150.1	Thale cress	plastid	18.46	37.53
Bra016586.1-P	Field mustard	nucleus, plastid	17.61	37.5
CDY21732	Canola	cytosol	10.14	37.4
AT1G17790.1	Thale cress	nucleus, plastid	19.1	36.76
PGSC0003DMT400027387	Potato	nucleus	22.41	36.46
VIT_19s0014g01650.t01	Wine grape	nucleus	22.73	35.68
KRH27020	Soybean	nucleus	24.55	35.6
KRH22304	Soybean	nucleus	23.8	34.84
VIT_12s0028g02510.t01	Wine grape	nucleus	24.01	34.4
CDY26219	Canola	nucleus	6.72	33.87
Zm00001d016131_P006	Maize	nucleus	23.91	33.38
Zm00001d002267_P001	Maize	plastid	16.01	33.26
PGSC0003DMT400061991	Potato	cytoskeleton, cytosol, nucleus	10.89	32.8
Zm00001d046528_P001	Maize	cytosol	5.23	32.67
Solyc10g008070.2.1	Tomato	nucleus	12.49	32.32
Zm00001d026333_P001	Maize	cytosol	15.9	31.63
CDY06203	Canola	nucleus	21.34	31.06
Zm00001d053427_P007	Maize	nucleus	22.63	31.04
Bra032431.1-P	Field mustard	nucleus	21.45	30.59
CDY09981	Canola	nucleus	20.81	30.52
Zm00001d049400_P001	Maize	plastid	15.58	30.17
Zm00001d024251_P001	Maize	cytosol	15.47	29.77
PGSC0003DMT400032373	Potato	nucleus	22.52	28.48
Solyc12g014170.1.1	Tomato	nucleus	21.24	28.39
PGSC0003DMT400039787	Potato	nucleus	21.13	28.12
CDX86532	Canola	nucleus	21.13	28.09
Bra030643.1-P	Field mustard	nucleus	21.66	27.47
Bra015485.1-P	Field mustard	nucleus	21.88	27.37
Solyc07g062660.2.1	Tomato	nucleus	21.88	27.26
CDX81848	Canola	cytosol, nucleus, plastid	7.9	26.91
AT1G06230.2	Thale cress	nucleus	21.34	26.11
KRH25703	Soybean	nucleus	23.16	24.83
CDY72432	Canola	cytosol	11.95	22.18
KRH55813	Soybean	nucleus	23.16	22.03
CDY68605	Canola	cytosol	12.81	21.86
Zm00001d036092_P004	Maize	endoplasmic reticulum, nucleus, plastid	8.32	21.37
Zm00001d017126_P001	Maize	nucleus	12.91	17.39
Zm00001d035167_P001	Maize	nucleus	13.98	17.28
Zm00001d049638_P009	Maize	nucleus	13.98	16.86
Zm00001d004790_P008	Maize	nucleus	8.11	13.15
Zm00001d053022_P001	Maize	nucleus	7.9	12.07
Zm00001d021185_P001	Maize	cytosol, nucleus, plastid	0.0	0.0

Protein Annotations

Gene3D:1.20.1270.220	Gene3D:1.20.920.10	MapMan:15.5.54	UniProt:A0A1D6MFX8	InterPro:Bromodomain	InterPro:Bromodomain-like_sf
ncoils:Coil	InterPro:DUF455	InterPro:Ferritin-like_SF	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:GTE_bromo	InterPro:IPR001487	InterPro:IPR027353	InterPro:IPR036427	InterPro:IPR038336	InterPro:NET_dom
InterPro:NET_sf	ProteinID:ONM28467.1	ProteinID:ONM28469.1	ProteinID:ONM28472.1	PFAM:PF00439	PFAM:PF04305
PFAM:PF17035	PRINTS:PR00503	PFscan:PS50014	PFscan:PS51525	PANTHER:PTHR22880	PANTHER:PTHR22880:SF181
SMART:SM00297	SUPFAM:SSF47240	SUPFAM:SSF47370	UniParc:UPI00084366CF	EnsemblPlantsGene:Zm00001d039369	EnsemblPlants:Zm00001d039369_P004
EnsemblPlants:Zm00001d039369_T004	SEG:seg	:	:	:	:

Description

DUF455 family protein

Coordinates

chr3:-:2681844..2690651

Molecular Weight (calculated)

103931.0 Da

IEP (calculated)

9.697

GRAVY (calculated)

-0.492

Length

937 amino acids

Sequence
(BLAST)

001: MASGPPSPSG KPYSRKSHAS SKAPSVPSFD AHNGQLLPTV TFSLPSTTTA RRELRRRLSS ELSQVRAAVK RLNSLPAPAP SSALSATDPS TPHPPYPPAS
101: KHKSKKGGGV PQPHLSAEAR RKLYAPVFKT CAALLSRLMK HKHSWVFNKP VDASALGLHD YHTIITKPMD LGTVKSKLGA GQYKSPREFA GDVRLTFQNA
201: MTYNPKGQDV HFMAEQLLNM FEEKWPEIEA EIAQLSPQPP TPSSAAPKKP KPKEIDNSRP LERSDSTVHA AGIEATPKTH TGRPQVLKKP KAREPNKRDM
301: TFWEKQRLSN NLQDLPPEKL DNVVQIIKKR NLSLSQHDDE IEVDIDSFDV ETLWELDRFV TNYRKSITKN KRKAELSAVR PDEADPDQEP EKVEHVRQGK
401: ADQDQIPAVQ EPIPEPETVD VDPPKESAAG GPVIRTQIVH QQMVLMLGNH PERSIYKPAA AFWHMQNWLF VIQILTIFGK LRGEEVPVHG IGEGEASSNL
501: NGDLMPCYKK TPQVGAPWVF FFMMKLSRPP SEYHTSLKKL AAIVQGIAKK QARVFPVSFV RRPLRLFPVG TRARTHRVIP GSGQMLPLRR LPPLPLPRGP
601: APRRLLSAAA SAAAVSPLPW PGLSAWRRAP PSDLRTWGPN GPCASGDVDE PAADAGAASS LAEMGALVLS TADPLAKARR THAAFSRWAA GLPIGQATAP
701: DHPARPDKPL VVTQKEITTH KEMGVPLNAY MLHNLAHVEL NAIDLAWDTV VRFAPLRDTL GDGFFADFAR VADDESRHFR WYSQRLGELG FSYGDMPVHN
801: LLWRECAKSS SDVSARLAVI PLVQNLDRKP EVSMLDQDIV ARVAEEELAH VSVGLYWFLK VCQMMGREPG DTFKDLIKEY SVVLKGPFNY PARDEAGIPR
901: EWYDEKFKQE AAQKLSEVHD RLACIVEMEK ESASLND

Best Arabidopsis Sequence Match ( AT1G06240.1 )
(BLAST)

001: MLIHHLRPFS TASLSPRSLT ISTALSSSST KQQHKLWSGL ENWRKSPVND LRLWGPTGPL LPSSSDSISA DFYGLVSAAS SLADLGALVL STSDPLSKSH
101: ISHLAFSRWR RENLPVGSIS HLPSSPARPP KPLLVATNQV PNPKDSNLPL NAHMLHNLAH VELNAIDLAW DTVARFSPFF DLLGHNFFDD FAHVADDESR
201: HFLWCSQRLA ELGFKYGDIP ANNLLMRECE KTSNNVAARL ACIPLVQEAR GLDAGPRLVK RLTGFGDNRT SKIVAKIAEE EVAHVAVGVD WFLSVCQKMN
301: RAPSPTFKDL IKEYGVELRG PFNHSAREVA GIPRDWYDPS CGTEVDKGDN EQGDKEQLSA VYDRLTHIIS MESENSSLEK PAK

Arabidopsis Description

Uncharacterized protein At1g06240 [Source:UniProtKB/TrEMBL;Acc:Q8H109]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.