Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY72432 | Canola | cytosol | 82.15 | 89.31 |
| Bra015485.1-P | Field mustard | nucleus | 97.81 | 71.7 |
| CDX86532 | Canola | nucleus | 73.59 | 57.3 |
| CDY06203 | Canola | nucleus | 67.21 | 57.3 |
| AT1G06230.2 | Thale cress | nucleus | 76.87 | 55.09 |
| CDY09981 | Canola | nucleus | 63.57 | 54.62 |
| CDY15568 | Canola | nucleus | 20.04 | 34.7 |
| KRH27020 | Soybean | nucleus | 38.8 | 32.97 |
| KRH22304 | Soybean | nucleus | 38.07 | 32.66 |
| VIT_12s0028g02510.t01 | Wine grape | nucleus | 38.07 | 31.96 |
| PGSC0003DMT400027387 | Potato | nucleus | 32.79 | 31.25 |
| KRH25703 | Soybean | nucleus | 44.44 | 27.92 |
| GSMUA_Achr11P... | Banana | nucleus | 21.49 | 27.9 |
| GSMUA_Achr10P... | Banana | nucleus, plastid | 22.22 | 27.29 |
| EES02258 | Sorghum | plastid | 21.49 | 26.46 |
| KRH55813 | Soybean | nucleus | 45.17 | 25.18 |
| Os02t0250300-01 | Rice | nucleus | 30.05 | 25.15 |
| CDY48040 | Canola | nucleus, plastid | 17.3 | 24.23 |
| Zm00001d008922_P001 | Maize | plastid | 21.49 | 24.08 |
| CDX82101 | Canola | nucleus | 8.01 | 24.04 |
| CDX82103 | Canola | plastid | 13.66 | 23.96 |
| Zm00001d016131_P006 | Maize | nucleus | 28.96 | 23.7 |
| GSMUA_Achr7P09350_001 | Banana | nucleus, plastid | 22.04 | 23.54 |
| CDY19175 | Canola | nucleus, plastid | 16.39 | 23.44 |
| Zm00001d053427_P007 | Maize | nucleus | 28.96 | 23.28 |
| CDX83890 | Canola | nucleus, plastid | 15.48 | 23.22 |
| HORVU6Hr1G045030.1 | Barley | nucleus | 26.78 | 23.22 |
| Solyc10g008070.2.1 | Tomato | nucleus | 15.3 | 23.2 |
| HORVU6Hr1G045070.4 | Barley | nucleus | 26.78 | 23.11 |
| CDX96751 | Canola | nucleus, plastid | 15.3 | 22.95 |
| CDY26215 | Canola | mitochondrion | 17.12 | 22.71 |
| TraesCS6D01G177700.1 | Wheat | cytosol, plastid | 26.23 | 22.68 |
| OQU84709 | Sorghum | nucleus | 29.33 | 22.61 |
| TraesCS3D01G146600.1 | Wheat | nucleus, plastid | 20.4 | 22.13 |
| TraesCS3B01G164100.1 | Wheat | nucleus, plastid | 20.4 | 21.96 |
| TraesCS3A01G140500.1 | Wheat | nucleus, plastid | 20.4 | 21.96 |
| GSMUA_Achr1P11660_001 | Banana | nucleus | 20.04 | 21.44 |
| CDX70357 | Canola | plastid | 14.57 | 20.36 |
| CDY21732 | Canola | cytosol | 7.65 | 16.54 |
| CDY65656 | Canola | cytosol | 6.19 | 16.43 |
| CDY65645 | Canola | nucleus, plastid | 14.75 | 15.91 |
| CDY08771 | Canola | nucleus | 10.02 | 15.54 |
| CDX90608 | Canola | cytosol | 9.29 | 14.33 |
| CDY29075 | Canola | cytoskeleton, cytosol, nucleus | 9.29 | 14.01 |
| CDY20057 | Canola | nucleus | 15.85 | 13.49 |
| CDY31648 | Canola | nucleus | 10.2 | 13.18 |
| Zm00001d039369_P004 | Maize | plastid | 21.86 | 12.81 |
| CDX84278 | Canola | nucleus | 10.2 | 12.79 |
| CDY48139 | Canola | nucleus | 12.02 | 7.47 |
| CDY43984 | Canola | endoplasmic reticulum | 5.46 | 6.86 |
| CDX81848 | Canola | cytosol, nucleus, plastid | 3.28 | 6.55 |
| CDX84396 | Canola | nucleus | 7.1 | 6.36 |
| CDY16729 | Canola | nucleus | 10.93 | 5.25 |
| CDY13699 | Canola | nucleus | 2.19 | 2.63 |
| CDX83673 | Canola | nucleus | 2.19 | 2.41 |
| CDY26219 | Canola | nucleus | 0.73 | 2.15 |
| CDX70356 | Canola | nucleus, plastid | 0.73 | 1.62 |
| Os01t0214300-01 | Rice | cytosol, nucleus | 0.0 | 0.0 |
| CDY66497 | Canola | nucleus | 0.0 | 0.0 |
| CDX78390 | Canola | nucleus | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.20.920.10 | MapMan:15.5.54 | UniProt:A0A078JQ73 | InterPro:Bromodomain | InterPro:Bromodomain-like_sf | EnsemblPlants:CDY68605 |
| ProteinID:CDY68605 | ProteinID:CDY68605.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| EnsemblPlantsGene:GSBRNA2T00076009001 | InterPro:GTE_bromo | InterPro:IPR001487 | InterPro:IPR036427 | PFAM:PF00439 | PRINTS:PR00503 |
| PFscan:PS50014 | PANTHER:PTHR22880 | PANTHER:PTHR22880:SF225 | SMART:SM00297 | SUPFAM:SSF47370 | UniParc:UPI0004EEA179 |
| SEG:seg | : | : | : | : | : |
Description
BnaAnng27790DBnaAnng27790D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JQ73]
Coordinates
chrLK037648:-:1..1987
Molecular Weight (calculated)
60647.0 Da
IEP (calculated)
5.435
GRAVY (calculated)
-0.697
Length
549 amino acids
Sequence
(BLAST)
(BLAST)
001: MASEPVNDGG REKQSIRVYT RKGKGQRKQS PFFAFATDEN EKANHRLNPP ETLAPESSDP IAVEKTALET KSREDSTEAP SDKVIDKPHD DVSLGAADKS
101: VIQSVPGPLV QDDANTTVGE KSVEVPSQSH KTQDDVNTVV VDENSIKEPS ESLAQEEDVT TVVVDKKAID APSETLSVED VNTVVVDKNP IEVSSENVVD
201: GVKEAYPENH PERDAQQTAG LTSDSAGESM PMEEGVDGRI KIHVASKSKQ QKEEIRKKLE DQLNVVRGLV KRIEDKEGEI GAYDDSRLLA STGITNGGGR
301: ILSGFASAGL PREVIRTPRP LNQLSISVLE NTQGFSEHVE KEKRTPKANQ FYRTSEFLLG DKLPPTESNK KSKSSAKKHG GEVGHGFGAG SKVFKNCSAL
401: LERLMKHKHG WVFNAPVDVK ALGLHDYFTI IEHPMDLGTV KSALTRNVYE SPREFAEDVR LTFHNAMTYN PPGQDVHIMA QVLLQMFEER WAVIEADYNR
501: QMRFVTSYEM NLPASTMRSR LGPTMPPPPI NVRNTIDRAD WSSHHPDLQ
101: VIQSVPGPLV QDDANTTVGE KSVEVPSQSH KTQDDVNTVV VDENSIKEPS ESLAQEEDVT TVVVDKKAID APSETLSVED VNTVVVDKNP IEVSSENVVD
201: GVKEAYPENH PERDAQQTAG LTSDSAGESM PMEEGVDGRI KIHVASKSKQ QKEEIRKKLE DQLNVVRGLV KRIEDKEGEI GAYDDSRLLA STGITNGGGR
301: ILSGFASAGL PREVIRTPRP LNQLSISVLE NTQGFSEHVE KEKRTPKANQ FYRTSEFLLG DKLPPTESNK KSKSSAKKHG GEVGHGFGAG SKVFKNCSAL
401: LERLMKHKHG WVFNAPVDVK ALGLHDYFTI IEHPMDLGTV KSALTRNVYE SPREFAEDVR LTFHNAMTYN PPGQDVHIMA QVLLQMFEER WAVIEADYNR
501: QMRFVTSYEM NLPASTMRSR LGPTMPPPPI NVRNTIDRAD WSSHHPDLQ
001: MASEPVNGGE GIDGAREKQI IKVYKRKGKG QRKQSSFFAL EAAIEKPEGL LENENDNNDV SPAETLAPEF EDPIVVVKNS IEEAALGTNS HGDKNLTEAP
101: SENLPGDDSD KVIDKPLVEA FSQAQPQDDA SLAAMDKSEE VPSQIPKAQD DVNTVVVDEN SIKEPPKSLA QEDVTTVIVD KNPIEAPSQT LSLEDGDTLV
201: VDKNPIEVSS EEDVHVIDAD NLIKEAHPEN FVERDTTDAQ QPAGLTSDSA HATAAGSMPM EEDADGRIRI HVASTTKQQK EEIRKKLEDQ LNVVRGMVKK
301: IEDKEGEIGA YNDSRVLINT GINNGGGRIL SGFASAGLPR EVIRAPRPVN QLSISVLENT QGVNEHVEKE KRTPKANQFY RNSEFLLGDK LPPAESNKKS
401: KSSSKKQGGD VGHGFGAGTK VFKNCSALLE RLMKHKHGWV FNAPVDVKGL GLLDYYTIIE HPMDLGTIKS ALMKNLYKSP REFAEDVRLT FHNAMTYNPE
501: GQDVHLMAVT LLQIFEERWA VIEADYNREM RFVTGYEMNL PTPTMRSRLG PTMPPPPINV RNTIDRADWS NRQPTTTPGR TPTSATPSGR TPALKKPKAN
601: EPNKRDMTYE EKQKLSGHLQ NLPPDKLDAI VQIVNKRNTA VKLRDEEIEV DIDSVDPETL WELDRFVTNY KKGLSKKKRK AELAIQARAE AERNSQQQMA
701: PAPAAHEFSR EGGNTAKKTL PTPLPSQVEK QNNETSRSSS SSSSSSSSSS SDSDSDSSSS SGSDQT
101: SENLPGDDSD KVIDKPLVEA FSQAQPQDDA SLAAMDKSEE VPSQIPKAQD DVNTVVVDEN SIKEPPKSLA QEDVTTVIVD KNPIEAPSQT LSLEDGDTLV
201: VDKNPIEVSS EEDVHVIDAD NLIKEAHPEN FVERDTTDAQ QPAGLTSDSA HATAAGSMPM EEDADGRIRI HVASTTKQQK EEIRKKLEDQ LNVVRGMVKK
301: IEDKEGEIGA YNDSRVLINT GINNGGGRIL SGFASAGLPR EVIRAPRPVN QLSISVLENT QGVNEHVEKE KRTPKANQFY RNSEFLLGDK LPPAESNKKS
401: KSSSKKQGGD VGHGFGAGTK VFKNCSALLE RLMKHKHGWV FNAPVDVKGL GLLDYYTIIE HPMDLGTIKS ALMKNLYKSP REFAEDVRLT FHNAMTYNPE
501: GQDVHLMAVT LLQIFEERWA VIEADYNREM RFVTGYEMNL PTPTMRSRLG PTMPPPPINV RNTIDRADWS NRQPTTTPGR TPTSATPSGR TPALKKPKAN
601: EPNKRDMTYE EKQKLSGHLQ NLPPDKLDAI VQIVNKRNTA VKLRDEEIEV DIDSVDPETL WELDRFVTNY KKGLSKKKRK AELAIQARAE AERNSQQQMA
701: PAPAAHEFSR EGGNTAKKTL PTPLPSQVEK QNNETSRSSS SSSSSSSSSS SDSDSDSSSS SGSDQT
Arabidopsis Description
GTE4Transcription factor GTE4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNC4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.