Factsheet for GSMUA_Achr7P09350_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1
plastid 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	nucleus, plastid	71.4	82.1
GSMUA_Achr11P...	Banana	nucleus	55.84	67.85
CDY15568	Canola	nucleus	35.41	57.41
CDY66497	Canola	nucleus	16.15	53.55
CDX96751	Canola	nucleus, plastid	35.6	50.0
CDX83890	Canola	nucleus, plastid	35.02	49.18
CDY26219	Canola	nucleus	17.7	48.92
CDY19175	Canola	nucleus, plastid	35.41	47.4
GSMUA_Achr1P11660_001	Banana	nucleus	47.28	47.37
VIT_19s0014g01650.t01	Wine grape	nucleus	52.33	45.06
CDX82103	Canola	plastid	27.04	44.41
Bra025948.1-P	Field mustard	mitochondrion	35.41	43.96
Bra016586.1-P	Field mustard	nucleus, plastid	37.55	43.86
CDY26215	Canola	mitochondrion	35.21	43.72
CDX82101	Canola	nucleus	15.56	43.72
CDY48040	Canola	nucleus, plastid	33.27	43.62
PGSC0003DMT400027387	Potato	nucleus	48.64	43.4
Bra008074.1-P	Field mustard	nucleus, plastid	33.07	43.37
KRH27020	Soybean	nucleus	53.11	42.26
KRH22304	Soybean	nucleus	52.14	41.88
AT1G73150.1	Thale cress	plastid	37.55	41.87
VIT_12s0028g02510.t01	Wine grape	nucleus	52.53	41.28
Solyc10g008070.2.1	Tomato	nucleus	28.79	40.88
PGSC0003DMT400061991	Potato	cytoskeleton, cytosol, nucleus	24.71	40.84
Bra031004.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	27.82	40.28
AT1G17790.1	Thale cress	nucleus, plastid	37.94	40.04
CDY21732	Canola	cytosol	18.09	36.61
CDY06203	Canola	nucleus	44.36	35.4
CDY09981	Canola	nucleus	43.58	35.05
Bra032431.1-P	Field mustard	nucleus	43.97	34.4
PGSC0003DMT400032373	Potato	nucleus	49.03	34.01
PGSC0003DMT400039787	Potato	nucleus	44.94	32.81
Solyc12g014170.1.1	Tomato	nucleus	44.55	32.67
CDX86532	Canola	nucleus	44.55	32.48
Solyc07g062660.2.1	Tomato	nucleus	46.69	31.91
GSMUA_Achr1P15650_001	Banana	nucleus	30.54	31.91
GSMUA_Achr3P00480_001	Banana	nucleus	32.3	31.8
Bra030643.1-P	Field mustard	nucleus	44.94	31.26
Bra015485.1-P	Field mustard	nucleus	44.94	30.84
AT1G06230.2	Thale cress	nucleus	44.94	30.16
KRH25703	Soybean	nucleus	50.58	29.75
CDX81848	Canola	cytosol, nucleus, plastid	15.37	28.73
KRH55813	Soybean	nucleus	50.78	26.5
GSMUA_Achr8P29340_001	Banana	nucleus	16.93	22.25
CDY72432	Canola	cytosol	21.79	22.18
CDY68605	Canola	cytosol	23.54	22.04
GSMUA_Achr8P08920_001	Banana	nucleus	25.49	20.15
GSMUA_Achr10P...	Banana	nucleus	23.54	18.97
GSMUA_Achr8P34430_001	Banana	nucleus	15.37	18.37
GSMUA_Achr8P01140_001	Banana	nucleus	25.88	17.71
GSMUA_Achr2P20970_001	Banana	nucleus	23.35	16.67
GSMUA_Achr3P02670_001	Banana	nucleus	22.37	16.31
GSMUA_Achr3P02660_001	Banana	plasma membrane	20.04	15.75
GSMUA_Achr4P27780_001	Banana	nucleus	17.12	13.06

Protein Annotations

Gene3D:1.20.1270.220	Gene3D:1.20.920.10	MapMan:15.5.54	InterPro:Bromodomain	InterPro:Bromodomain-like_sf	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSMUA_Achr7G09350_001	EnsemblPlants:GSMUA_Achr7P09350_001	EnsemblPlants:GSMUA_Achr7T09350_001	InterPro:GTE_bromo
InterPro:IPR001487	InterPro:IPR027353	InterPro:IPR036427	InterPro:IPR038336	UniProt:M0TG23	InterPro:NET_dom
InterPro:NET_sf	PFAM:PF00439	PFAM:PF17035	PRINTS:PR00503	PFscan:PS50014	PFscan:PS51525
PANTHER:PTHR22880	PANTHER:PTHR22880:SF147	SMART:SM00297	SUPFAM:SSF47370	UniParc:UPI0002952FB0	SEG:seg

Description

Putative Bromodomain-containing protein GTE3, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr7G09350_001]

Coordinates

chr7:-:7648041..7650099

Molecular Weight (calculated)

56207.1 Da

IEP (calculated)

9.597

GRAVY (calculated)

-0.770

Length

514 amino acids

Sequence
(BLAST)

001: MASAPPAGGG KVYTRKSLNK APKRSSQPRP PPPPPDDLDS PRRHRSPPAA SDDASSGPNR PSVGPSLANG HGPRGLGVAV GLTCRSRQEA RELRRKLTAD
101: LDLVRALSKR LEAHELQLAS AAGYTRSQLS VTDPNTPGSA RRAPDKSKAI GGKKQSSELP DGGGAHLVDK KLYAQAFKSC SVLLSKLMKH KHGWVFNVQV
201: DAKGLGLHDY YTIIKCPMDL GTVKSRFAKD WYSSPYEFAE DVRLTFRNAM TYNPKGQDVY VMAEQLLQIF EERWPAIEAE FAHHARQPVI QTPPPLDLRM
301: LERSDSTVHP VAAEPMMKPG NHPTHIGRTP APKKPKAKDP NKRDMTFEEK QKLSNNLQNL PPEKLEAVVQ IIKKRNSSLS QHDDEIEVDI DSVDVETLWE
401: LDRFITNYKK TLSKNKRKAE LAISVTQAAE RNAPEVVHKM IEEPIASEEP EKLVDEKYVA SSSPVGGENK GDNAIRSSSS SSSSSDSGSS SSDSGSESSS
501: AYGSDAAHSH SPRT

Best Arabidopsis Sequence Match ( AT1G06230.2 )
(BLAST)

001: MASEPVNGGE GIDGAREKQI IKVYKRKGKG QRKQSSFFAL EAAIEKPEGL LENENDNNDV SPAETLAPEF EDPIVVVKNS IEEAALGTNS HGDKNLTEAP
101: SENLPGDDSD KVIDKPLVEA FSQAQPQDDA SLAAMDKSEE VPSQIPKAQD DVNTVVVDEN SIKEPPKSLA QEDVTTVIVD KNPIEAPSQT LSLEDGDTLV
201: VDKNPIEVSS EEDVHVIDAD NLIKEAHPEN FVERDTTDAQ QPAGLTSDSA HATAAGSMPM EEDADGRIRI HVASTTKQQK EEIRKKLEDQ LNVVRGMVKK
301: IEDKEGEIGA YNDSRVLINT GINNGGGRIL SGFASAGLPR EVIRAPRPVN QLSISVLENT QGVNEHVEKE KRTPKANQFY RNSEFLLGDK LPPAESNKKS
401: KSSSKKQGGD VGHGFGAGTK VFKNCSALLE RLMKHKHGWV FNAPVDVKGL GLLDYYTIIE HPMDLGTIKS ALMKNLYKSP REFAEDVRLT FHNAMTYNPE
501: GQDVHLMAVT LLQIFEERWA VIEADYNREM RFVTGYEMNL PTPTMRSRLG PTMPPPPINV RNTIDRADWS NRQPTTTPGR TPTSATPSGR TPALKKPKAN
601: EPNKRDMTYE EKQKLSGHLQ NLPPDKLDAI VQIVNKRNTA VKLRDEEIEV DIDSVDPETL WELDRFVTNY KKGLSKKKRK AELAIQARAE AERNSQQQMA
701: PAPAAHEFSR EGGNTAKKTL PTPLPSQVEK QNNETSRSSS SSSSSSSSSS SDSDSDSSSS SGSDQT

Arabidopsis Description

GTE4Transcription factor GTE4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNC4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.