Factsheet for GSMUA_Achr8P34430_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P29340_001	Banana	nucleus	50.93	56.01
KRH37141	Soybean	cytosol, nucleus	30.47	47.99
Solyc09g090370.2.1	Tomato	nucleus	38.37	47.69
KRH04734	Soybean	nucleus	41.86	47.49
VIT_13s0019g03950.t01	Wine grape	nucleus	41.86	46.63
Solyc09g015660.2.1	Tomato	cytosol	39.07	46.54
PGSC0003DMT400044321	Potato	nucleus	40.7	46.42
KRH45305	Soybean	nucleus	36.28	42.51
TraesCS7A01G080900.1	Wheat	nucleus	34.65	42.45
EER87804	Sorghum	nucleus	33.95	42.2
TraesCS4A01G377900.2	Wheat	cytosol	34.42	42.17
TraesCS7D01G074500.1	Wheat	cytosol	34.19	41.88
HORVU5Hr1G097840.6	Barley	cytosol	33.95	41.71
HORVU7Hr1G018300.6	Barley	cytosol	33.95	41.48
TraesCS1B01G385900.1	Wheat	cytosol	32.79	41.23
TraesCS1A01G367300.1	Wheat	cytosol	33.26	40.97
Zm00001d036092_P004	Maize	endoplasmic reticulum, nucleus, plastid	34.19	40.27
AT2G34900.1	Thale cress	nucleus	35.35	39.38
TraesCS1D01G373000.1	Wheat	cytosol	32.56	39.0
KRH12139	Soybean	nucleus	31.63	38.97
Bra005383.1-P	Field mustard	nucleus	34.88	38.96
Bra012810.1-P	Field mustard	cytosol	30.93	37.36
CDX90608	Canola	cytosol	30.23	36.52
CDY29075	Canola	cytoskeleton, cytosol, nucleus	30.47	35.99
CDY31648	Canola	nucleus	35.35	35.76
Os06t0138000-01	Rice	cytosol, nucleus	10.23	35.48
AT3G52280.2	Thale cress	nucleus	31.4	34.97
CDX84278	Canola	nucleus	35.58	34.93
Bra034451.1-P	Field mustard	cytosol	39.53	32.2
GSMUA_Achr11P...	Banana	nucleus	17.91	18.2
GSMUA_Achr10P...	Banana	nucleus, plastid	18.14	17.45
GSMUA_Achr1P15650_001	Banana	nucleus	17.91	15.65
GSMUA_Achr7P09350_001	Banana	nucleus, plastid	18.37	15.37
GSMUA_Achr3P00480_001	Banana	nucleus	18.6	15.33
GSMUA_Achr1P11660_001	Banana	nucleus	17.91	15.01
GSMUA_Achr8P08920_001	Banana	nucleus	16.51	10.92
GSMUA_Achr3P02660_001	Banana	plasma membrane	16.28	10.7
GSMUA_Achr3P02670_001	Banana	nucleus	16.05	9.79
GSMUA_Achr10P...	Banana	nucleus	13.95	9.4
GSMUA_Achr8P01140_001	Banana	nucleus	16.28	9.32
GSMUA_Achr4P27780_001	Banana	nucleus	13.95	8.9
GSMUA_Achr2P20970_001	Banana	nucleus	14.88	8.89

Protein Annotations

Gene3D:1.20.1270.220	Gene3D:1.20.920.10	MapMan:15.5.54	InterPro:Bromodomain	InterPro:Bromodomain-like_sf	ncoils:Coil
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr8G34430_001	EnsemblPlants:GSMUA_Achr8P34430_001	EnsemblPlants:GSMUA_Achr8T34430_001	InterPro:GTE1/GTE6	InterPro:IPR001487
InterPro:IPR027353	InterPro:IPR036427	InterPro:IPR038336	UniProt:M0TW45	InterPro:NET_dom	InterPro:NET_sf
PFAM:PF00439	PFAM:PF17035	PRINTS:PR00503	PFscan:PS50014	PFscan:PS51525	PANTHER:PTHR22880
PANTHER:PTHR22880:SF163	SMART:SM00297	SUPFAM:SSF47370	UniParc:UPI0002967A84	SEG:seg	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr8G34430_001]

Coordinates

chr8:-:35343187..35350281

Molecular Weight (calculated)

49741.7 Da

IEP (calculated)

8.833

GRAVY (calculated)

-0.617

Length

430 amino acids

Sequence
(BLAST)

001: MIFFFRELFY VPFENTITLS RSFMTNSEAG YRSRHILFDG WYQSFRSINW PHLPLPLAAS AVIVWGGLGK GSLPSPKSSS KPYTKKQPRP RLAHFRRRLL
101: LRMATAPELQ RSPKNPQSDV ERWKHRVDEY NSKVDELEQR VNEVLEHYAT RKQPKTSKGS SGGKVKEMDK FSAINNSGSN HSGGKLVEGC PKEVICSKRM
201: QELMRHKYTM AHTKMSQHKW AWPFMEPVDV KGLGLDDYHE VIKRPMDFST IKNQMEAKDG SGYKNVREIY ADVRLVFANA MTYNDDRTDI HVMAKTLLEK
301: FEEKWLQLLP KVVEEEARQK EDEAWDLANM QIFHEASYET MAKDTSSELD ELNLHLEKLR ELVIQKCRKM STKEKRELSV GLSSLPPEDL NKALEIIAQN
401: NPIFRATGEV VDLDMDAQVV SCACFELFLR

Best Arabidopsis Sequence Match ( AT2G34900.1 )
(BLAST)

001: MSVHVKEEPV LVPNCDVENT ELAVFNGNGE SELENFGTCV DEITDRVNQL EQKVVEVEHF YSTKDGAAQT NTSKSNSGGK KIAISQPNNS KGNSAGKEKS
101: KGKHVSSPDL MRQFATMFRQ IAQHKWAWPF LEPVDVKGLG LHDYYKVIEK PMDLGTIKKK MESSEYSNVR EIYADVRLVF KNAMRYNEEK EDVYVMAESL
201: LEKFEEKWLL IMPKLVEEEK KQVDEEAEKH ANKQLTMEAA QAEMARDLSN ELYEIDLQLE KLRESVVQRC RKLSTQEKKG LSAALGRLSP EDLSKALKMV
301: SESNPSFPAG APEVELDIDV QTDVTLWRLK VFVQEALKAA NKSSGGTNAQ NNNNTGTGEI NKNNAKRRRE ISDAINKASI KRAKKA

Arabidopsis Description

GTE1Transcription factor GTE1 [Source:UniProtKB/Swiss-Prot;Acc:Q84XV2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.