Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- plasma membrane 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G080900.1 | Wheat | nucleus | 95.14 | 94.87 |
| TraesCS7D01G074500.1 | Wheat | cytosol | 94.57 | 94.3 |
| TraesCS4A01G377900.2 | Wheat | cytosol | 94.0 | 93.73 |
| HORVU7Hr1G018300.6 | Barley | cytosol | 93.14 | 92.61 |
| Os06t0138000-01 | Rice | cytosol, nucleus | 26.86 | 75.81 |
| EER87804 | Sorghum | nucleus | 69.43 | 70.23 |
| Zm00001d036092_P004 | Maize | endoplasmic reticulum, nucleus, plastid | 68.29 | 65.48 |
| KRH04734 | Soybean | nucleus | 52.86 | 48.81 |
| Solyc09g015660.2.1 | Tomato | cytosol | 50.0 | 48.48 |
| Solyc09g090370.2.1 | Tomato | nucleus | 47.14 | 47.69 |
| GSMUA_Achr8P29340_001 | Banana | nucleus | 52.29 | 46.8 |
| VIT_13s0019g03950.t01 | Wine grape | nucleus | 51.43 | 46.63 |
| PGSC0003DMT400044321 | Potato | nucleus | 49.43 | 45.89 |
| KRH37141 | Soybean | cytosol, nucleus | 33.43 | 42.86 |
| KRH45305 | Soybean | nucleus | 44.29 | 42.23 |
| Bra012810.1-P | Field mustard | cytosol | 41.71 | 41.01 |
| KRH12139 | Soybean | nucleus | 40.57 | 40.69 |
| CDX90608 | Canola | cytosol | 41.14 | 40.45 |
| CDY29075 | Canola | cytoskeleton, cytosol, nucleus | 41.71 | 40.11 |
| AT2G34900.1 | Thale cress | nucleus | 43.43 | 39.38 |
| Bra005383.1-P | Field mustard | nucleus | 43.14 | 39.22 |
| AT3G52280.2 | Thale cress | nucleus | 41.14 | 37.31 |
| CDY31648 | Canola | nucleus | 43.14 | 35.53 |
| CDX84278 | Canola | nucleus | 43.14 | 34.47 |
| GSMUA_Achr8P34430_001 | Banana | nucleus | 41.71 | 33.95 |
| Bra034451.1-P | Field mustard | cytosol | 39.14 | 25.95 |
| HORVU4Hr1G055510.6 | Barley | cytosol, nucleus, plastid | 10.86 | 16.67 |
| HORVU6Hr1G045030.1 | Barley | nucleus | 24.86 | 13.74 |
| HORVU6Hr1G045070.4 | Barley | nucleus | 24.86 | 13.68 |
| HORVU3Hr1G015760.1 | Barley | nucleus | 19.71 | 12.5 |
| HORVU6Hr1G054560.16 | Barley | nucleus | 20.86 | 10.21 |
| HORVU3Hr1G022660.1 | Barley | nucleus | 20.57 | 10.11 |
| HORVU7Hr1G074620.7 | Barley | cytosol, mitochondrion, nucleus | 19.43 | 8.73 |
| HORVU7Hr1G118300.1 | Barley | cytosol | 15.43 | 7.58 |
Protein Annotations
| Gene3D:1.20.1270.220 | Gene3D:1.20.920.10 | MapMan:15.5.54 | InterPro:Bromodomain | InterPro:Bromodomain-like_sf | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:HORVU5Hr1G097840 | EnsemblPlants:HORVU5Hr1G097840.6 |
| InterPro:IPR001487 | InterPro:IPR027353 | InterPro:IPR036427 | InterPro:IPR038336 | UniProt:M0WZ63 | InterPro:NET_dom |
| InterPro:NET_sf | PFAM:PF00439 | PFAM:PF17035 | PRINTS:PR00503 | PFscan:PS50014 | PFscan:PS51525 |
| PANTHER:PTHR22880 | PANTHER:PTHR22880:SF180 | SMART:SM00297 | SUPFAM:SSF47370 | UniParc:UPI000295CC6E | SEG:seg |
Description
Predicted protein; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:M0WZ63]
Coordinates
chrchr5H:-:605860191..605864298
Molecular Weight (calculated)
39590.7 Da
IEP (calculated)
6.204
GRAVY (calculated)
-0.751
Length
350 amino acids
Sequence
(BLAST)
(BLAST)
001: MVPEDSAQQA AAAAAEPPAV SEVDSFRRQV DDLASKTDVL EKRVNDVVGF YDGKKHGSGG RRASGSSRYA VNGARDSHCK GMPDLMRQLA GIIRQITSHE
101: WSAPFLQPVD VVGLQLDDYH KIITKPMDFS TIQNKMEGKD GTKYKSVREI YSDVRLIFNN AMTYNDEHHD VHIMAKLLLD KFEEKWLQLL PKVENEERKH
201: VEPNDAPTTD TSPEDAIAKL AKDTDDELNE INRQLEELRN MVVQRCKKMT TDEKRKLGAG LCHLTPEDLS KALELVAQDN PDFQTTAEEV HLDMDAQSET
301: TLWRLKFFVR EALERQANTA AAPGKTDENA KRKRDIYNAL AKTASKRIRR
101: WSAPFLQPVD VVGLQLDDYH KIITKPMDFS TIQNKMEGKD GTKYKSVREI YSDVRLIFNN AMTYNDEHHD VHIMAKLLLD KFEEKWLQLL PKVENEERKH
201: VEPNDAPTTD TSPEDAIAKL AKDTDDELNE INRQLEELRN MVVQRCKKMT TDEKRKLGAG LCHLTPEDLS KALELVAQDN PDFQTTAEEV HLDMDAQSET
301: TLWRLKFFVR EALERQANTA AAPGKTDENA KRKRDIYNAL AKTASKRIRR
001: MSVHVKEEPV LVPNCDVENT ELAVFNGNGE SELENFGTCV DEITDRVNQL EQKVVEVEHF YSTKDGAAQT NTSKSNSGGK KIAISQPNNS KGNSAGKEKS
101: KGKHVSSPDL MRQFATMFRQ IAQHKWAWPF LEPVDVKGLG LHDYYKVIEK PMDLGTIKKK MESSEYSNVR EIYADVRLVF KNAMRYNEEK EDVYVMAESL
201: LEKFEEKWLL IMPKLVEEEK KQVDEEAEKH ANKQLTMEAA QAEMARDLSN ELYEIDLQLE KLRESVVQRC RKLSTQEKKG LSAALGRLSP EDLSKALKMV
301: SESNPSFPAG APEVELDIDV QTDVTLWRLK VFVQEALKAA NKSSGGTNAQ NNNNTGTGEI NKNNAKRRRE ISDAINKASI KRAKKA
101: KGKHVSSPDL MRQFATMFRQ IAQHKWAWPF LEPVDVKGLG LHDYYKVIEK PMDLGTIKKK MESSEYSNVR EIYADVRLVF KNAMRYNEEK EDVYVMAESL
201: LEKFEEKWLL IMPKLVEEEK KQVDEEAEKH ANKQLTMEAA QAEMARDLSN ELYEIDLQLE KLRESVVQRC RKLSTQEKKG LSAALGRLSP EDLSKALKMV
301: SESNPSFPAG APEVELDIDV QTDVTLWRLK VFVQEALKAA NKSSGGTNAQ NNNNTGTGEI NKNNAKRRRE ISDAINKASI KRAKKA
Arabidopsis Description
GTE1Transcription factor GTE1 [Source:UniProtKB/Swiss-Prot;Acc:Q84XV2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.